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Properties
| Property Name | Value |
|---|
| Product | ca2 :cation antiporter family |
| Orig transcript id | gnl|cribi|Naga_100148g3.7156.mrna |
| Orig protein id | gnl|cribi|Naga_100148g3.7156 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:680713..683246 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5725 ID=rna5725|Name=rna5725|organism=Nannochloropsis gaditana|type=mRNA|length=1470bp
AAAAGCGCCGGCAAACCTCTCTGTCTTGCCCTTTTAGGAGAGGCTCGCAC
CCGACAATCTTTCCCAACACAAGTAAATCGGTGCATGAGGCGCGGAACAA
GGTCAAATCTTTGGGCCGTGCTGCTGTTGCTTGTACTTTCGGGTGGATCT
GCTTTTGTAAAGTTGTTCAAGGCGTCCGTCGCGAGGTACGTCCGATGTTC
ATGAAGACGTACACGATAACTCCTTGATACTGCAAGAAACCATTCATCAT
CTCGAATGTGAATGATTACGAGGGTGTCTGTCGACCGCTGAAGCCGCTTT
CAAGGGCAAGGGACGAGTGGGATAGTTTTCGGATCAGGCAATTAGGTCAG
GATGGTTTAACCGATTATCGATCCTTTTGATCTACCAACCCTCCTCTAGG
CGCCCTTGTCATTTTCGGCGTACAAACCATCGACTAGTCATGGGCAATTT
GCTTTCTTTTTCATCCGGTCCGTCCATCGACAATTTCTTGGATGGAAAAG
TCGTATGGATTACTGGTGCGAGCTCAGGATTAGGGAAGGCAATGGCTATT
GAAGCAGCTCGACGCGGGGCTCGTGTTATCTTAAGTGCCCGAAGCATTGA
TAAGTTGAAAAATGTCGAGCAGGAATGCCTGGCGGTTTCGCCATTGAAGA
CATCGAACGCGTCAAGATCAGCGCGTTCGCGTTGCTCTTCCTCCGATGCT
CCCTCCGCCACAGTGCTTGTCCACCCTTTGGACATGCTCAGGTACGACGA
CGGTAGTTTTGACGCCGCCATTGCCCTTGTGCTTAGCACAATGGGTGGCT
TGGACATCCTCGTGAACAACGCGGGGGTCTCCACGCGCAGCTCCGCCGAA
GAGACCTCGCTCTCTGTAGACCAGTCCGTGATGGCAACCAATTTCTTTGG
GCCCGTGGCACTGACCAAGGCGGCATTGTGCTTGCTTCGCCAAAGTCCCT
CACGCTCGCCGCACATAGTGGTAGTGAACAGTGCGCAGGGAAAGCTGGGC
TTGGGTATGCGCACGTCCTATGCGGCCTCCAAGCACGCCCTCACCGGCTA
CTTCGATTCCTTGAGGGCCGAGCTGAGTCTGGAATCCATTCCTGTCACTA
CGGTCTTCCCTGGCTATATCAGAACAGATTTATCGTTGAACGCCTTGACG
GGTCGAGGGGAGAAATACGCACAGATGGATGAGACGACGGCCAAGGGCCT
CGACCCCACCCGTCTGGCCGTGAAGATCTTTCAAGCCGCGGCTGCTGGGA
AGCAAGAGGTAATCTTCGCTCCTATTGATGCGAGGGCAGCGATATACTTG
CGGAATATCATTCCACATGTGGTGTTCAGAATTTTGGCCCGCAAGGCCCA
GAAGGCATTAAGAGACAGGATACCGAATGAAAGCAGGCGCGAGGAGACCA
AGAAAAAGAAATAAGAGATGAGGAAGCACTCGCGCGCTCCCCAAAGAATT
TCATACGGCTCGCGAATTAC back to topprotein sequence of rna5725 >rna5725-protein ID=rna5725-protein|Name=rna5725|organism=Nannochloropsis gaditana|type=polypeptide|length=600bp
MTSGLFIDPTTLPSDAGGAVQLLFLLLVYGKILMDSSSMISEGSELLLLV
PSLAGVVGSVVLPVLGAVPDGAIVLFSGMGDNAQEELTVGVGALAGSTIM
LLTIPWCLSIIGGRVNLDPVSGEALYKRPSGASKYWSKVPTKWHMKYNGI
GILPPVRMAALIMLWSAANFLIIQIPAFVYAADVSTAALAEDERPWAGLG
LATTALSFVLYLLYQWRTANSDELKNDKIAEITLKNISRGKLSLLGALGP
EFEEAIREHHALRRCSWRGRRENSEGMETGASAALPLASEYGSLADDSRD
LRPLKASVMERLVFICRPFFHRYDWDMTGTLDRGEIWQLFADLGEAPGPE
EFRELWEEYDRDGDGQLNFQEFLDLVIDHAMSVLHEGHHHERRSSWRGEE
GVGRKQAGPVHKVEAEAEAEEEEEEEEIPEDLKDLPWETQQSRLMRRAFY
MMAEGTLLILVFADPLIGVLSEVGARTGIPAFYVSFVLSPLVSNGAEVLA
AYSYAQKKSSKTISISLATLMGAAVMNATFVLFIFLLLIYVKRLAWTFSA
ETVAILFVQIVVGLLALSKRQSLWHALFILFLYPVSLVLVYVMENILRFD back to topmRNA from alignment at CM002466.1:680713..683246+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5725 ID=rna5725|Name=rna5725|organism=Nannochloropsis gaditana|type=mRNA|length=2534bp|location=Sequence derived from alignment at CM002466.1:680713..683246+ (Nannochloropsis gaditana)
CACTCCAGAATGACCAGTGGGCTATTCATCGATCCCACGACGCTGCCCAG
TGATGCAGGGGGGGCCGTACAACTTCTGTTCCTGTTGCTCGTGTACGGGA
AAATCCTGATGGACTCGAGCAGCATGATAAGTGAGGGGTCGGAGCTCTTG
CTTTTAGTTCCCTCAttggcgggcgtggtgggATCAGTAGTCCTTCCTGT
TCTCGGCGCCGTGCCAGACGGGGCAATTGTCCTCTTCAGTGGGATGGGGG
ATAACGCGCAGGAGGAATTGACGGTCGGGGTCGGGGCGCTAGCGGGGTCC
ACCATTATGCTTTTGACCATTCCGTGGTGTTTGTCCATCATTGGTGGCCG
TGTCAACCTCGATCCTGTCTCGGGGGAGGCCCTCTACAAACGCCCTTCGG
GAGCATCCAAATATTGGAGCAAAGTACCCACCAAATGGCACATGAAGTAC
AACGGGATCGGAATTCTGCCACCTGTCCGAATGGCGGCGCTTATCATGCT
GTGGAGTGCCGCCAACTTCCTGATCATTCAGatccccgccttcgtctACG
CGGCAGACGTCAGCACGGCCGCATTGGCTGAAGACGAACGTCCCTGGGCC
GGACTGGGGCTGGCAACCACCGCGCTCTCTTTcgtcctctacctcctttA
TCAGTGGCGTACCGCGAACAGCGACGAATTGAAGAACGACAAGATAGCGG
AGATCACACTGAAGAATATTAGCCGCGGGAAGCTGTCCTTGCTGGGCGCC
TTGGGCCCGGAATTCGAAGAGGCCATTCGCGAGCACCACGCCTTGCGGCG
TTGTtcctggaggggcaggcgggagaaCAGTGAGGGCATGGAGACCGGCG
CCTCGGCGGCTCTGCCTTTGGCCAGTGAGTACGGCTCTCTAGCGGACGAC
TCGAGAGACCTCCGGCCCCTGAAAGCGTCGGTCATGGAACGGCTCGTCTT
CATCTGTCGACCATTTTTCCATCGGTACGACTGGGACATGACGGGAACGT
TGGACAGGGGAGAGATCTGGCAGCTTTTTGCGGATCTTGGGGAGGCGCCC
GGACCAGAGGAATTCAGGGAATTGTGGGAGGAGTACGACAGGGACGGAGA
TGGACAGCTGAACTTCCAGGAATTTTTGGACCTGGTGATCGACCACGCCA
TGAGCGTGCTGCACGAGGGTCACCATCATGAGCGGCGATCGTCgtggcga
ggagaagaaggggtagGGAGAAAGCAAGCGGGGCCGGTGCATAaggtcga
ggcggaggcggaggcggaggaggaggaggaggaagaagagatccCAGAGG
ACTTGAAAGATCTGCCCTGGGAAACGCAGCAGTCGCGACTGATGCGGCGG
GCGTTCTACATGATGGCTGAAGGGACCTTGCTCATTTTGGTGTTCGCTGA
CCCGCTTATCGGGGTCCTGTCGGAGGTGGGGGCTCGGACTGGGATCCCGG
CCTTCTACGTCTCCTTTGtgctctcccccctcgtctcgaACGGCGCTGAG
GTGCTGGCCGCATATTCCTATGCACAGAAGAAGAGTAGCAAGACCATCTC
TATCTCCCTAGCCACCCTCATGGGGGCGGCGGTCATGAATGCCACCtttg
tcctcttcatcttcctcctcttgatcTACGTGAAACGCCTGGCCTGGACG
TTCAGTGCCGAGACGGTGGCCATTCTCTTCGTGCAAATAGTCGTGGGGTT
GCTGGCGTTGTCCAAACGCCAAAGCCTGTGGCAcgccctcttcatcctct
tcctgtaCCCCGTCTCTCTGGTCCTGGTGTACGTGATGGAGAATATCTTA
AGGTTTGATTGAGGGCCAGAATTTTCGATTTAGAAAATCTTCAGCTTTGA
CTGAGGGCTATGGTGAACGCGTTGTTCCCTTTTGCATTTGAGAGGGGCTT
GAAAGAATACGAAAGCCAGTAAAAAGTGGTTGCTGAGTTTGGAGGAGATC
ACGACTGCATGTGTGCCCATAGCGGCCGAACGAAAGActgagggaagagg
gttCGAACCCGAACATTGCATATACACAAAGTATCAAGCGTTGATGATCA
TTTTGACAGCAAGGAGGGTAAACACGGAGCCGCACGCAAGCAGGCGTGCT
CCTCTTTGGACTCCTGTAGCTTGTCCCCGCTTATTTTGTAACAAATTATC
TGCCCCGTCCACACCCTCACAGTCGCTGCCTATGTGCATTGTTTTTTTCC
AAGCCTTCTCGTCGCCAAACGCCGACGGCAGCCACTCAGGGCCCAGTGAC
TCTGTAAGGGCGGATGTCGGTGGTATTGATCAGCCTCGGACAGAAACAGG
AGATAGGCACACACCAGCTTCCGCGTCAGAGTCGGCGATGACGGATGAAG
GCATCGGAATCTCCCCCGCTGTTCATGCGACCCTGGCGCGACAATACGCT
TTGATCCTTGCATCCAACCGAGACGAGTACCTGGCGCGGCCTACCCGGCG
GCCCTGCTTCTGGGATGCCGGGGACGAgacgaaagaggaaggtTGGAATA
CGAGTCCGATGGGGAAAGGattgaggaaggagcg back to topCoding sequence (CDS) from alignment at CM002466.1:680713..683246+ >rna5725 ID=rna5725|Name=rna5725|organism=Nannochloropsis gaditana|type=CDS|length=1803bp|location=Sequence derived from alignment at CM002466.1:680713..683246+ (Nannochloropsis gaditana)
ATGACCAGTGGGCTATTCATCGATCCCACGACGCTGCCCAGTGATGCAGG
GGGGGCCGTACAACTTCTGTTCCTGTTGCTCGTGTACGGGAAAATCCTGA
TGGACTCGAGCAGCATGATAAGTGAGGGGTCGGAGCTCTTGCTTTTAGTT
CCCTCAttggcgggcgtggtgggATCAGTAGTCCTTCCTGTTCTCGGCGC
CGTGCCAGACGGGGCAATTGTCCTCTTCAGTGGGATGGGGGATAACGCGC
AGGAGGAATTGACGGTCGGGGTCGGGGCGCTAGCGGGGTCCACCATTATG
CTTTTGACCATTCCGTGGTGTTTGTCCATCATTGGTGGCCGTGTCAACCT
CGATCCTGTCTCGGGGGAGGCCCTCTACAAACGCCCTTCGGGAGCATCCA
AATATTGGAGCAAAGTACCCACCAAATGGCACATGAAGTACAACGGGATC
GGAATTCTGCCACCTGTCCGAATGGCGGCGCTTATCATGCTGTGGAGTGC
CGCCAACTTCCTGATCATTCAGatccccgccttcgtctACGCGGCAGACG
TCAGCACGGCCGCATTGGCTGAAGACGAACGTCCCTGGGCCGGACTGGGG
CTGGCAACCACCGCGCTCTCTTTcgtcctctacctcctttATCAGTGGCG
TACCGCGAACAGCGACGAATTGAAGAACGACAAGATAGCGGAGATCACAC
TGAAGAATATTAGCCGCGGGAAGCTGTCCTTGCTGGGCGCCTTGGGCCCG
GAATTCGAAGAGGCCATTCGCGAGCACCACGCCTTGCGGCGTTGTtcctg
gaggggcaggcgggagaaCAGTGAGGGCATGGAGACCGGCGCCTCGGCGG
CTCTGCCTTTGGCCAGTGAGTACGGCTCTCTAGCGGACGACTCGAGAGAC
CTCCGGCCCCTGAAAGCGTCGGTCATGGAACGGCTCGTCTTCATCTGTCG
ACCATTTTTCCATCGGTACGACTGGGACATGACGGGAACGTTGGACAGGG
GAGAGATCTGGCAGCTTTTTGCGGATCTTGGGGAGGCGCCCGGACCAGAG
GAATTCAGGGAATTGTGGGAGGAGTACGACAGGGACGGAGATGGACAGCT
GAACTTCCAGGAATTTTTGGACCTGGTGATCGACCACGCCATGAGCGTGC
TGCACGAGGGTCACCATCATGAGCGGCGATCGTCgtggcgaggagaagaa
ggggtagGGAGAAAGCAAGCGGGGCCGGTGCATAaggtcgaggcggaggc
ggaggcggaggaggaggaggaggaagaagagatccCAGAGGACTTGAAAG
ATCTGCCCTGGGAAACGCAGCAGTCGCGACTGATGCGGCGGGCGTTCTAC
ATGATGGCTGAAGGGACCTTGCTCATTTTGGTGTTCGCTGACCCGCTTAT
CGGGGTCCTGTCGGAGGTGGGGGCTCGGACTGGGATCCCGGCCTTCTACG
TCTCCTTTGtgctctcccccctcgtctcgaACGGCGCTGAGGTGCTGGCC
GCATATTCCTATGCACAGAAGAAGAGTAGCAAGACCATCTCTATCTCCCT
AGCCACCCTCATGGGGGCGGCGGTCATGAATGCCACCtttgtcctcttca
tcttcctcctcttgatcTACGTGAAACGCCTGGCCTGGACGTTCAGTGCC
GAGACGGTGGCCATTCTCTTCGTGCAAATAGTCGTGGGGTTGCTGGCGTT
GTCCAAACGCCAAAGCCTGTGGCAcgccctcttcatcctcttcctgtaCC
CCGTCTCTCTGGTCCTGGTGTACGTGATGGAGAATATCTTAAGGTTTGAT
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