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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100148g1.7144.mrna |
| Orig protein id | gnl|cribi|Naga_100148g1.7144 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:678051..679055 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5723 ID=rna5723|Name=rna5723|organism=Nannochloropsis gaditana|type=mRNA|length=2140bp
ATAGGCAACCATGCACATTTTCCGGCAACCATTGGCAAACGCCTTTCTAT
TAAGCATTGTTGTATTCTATAGCTCTGGGCATCGATATGTCAATGGCTTT
TCTTCTTCATCTCCAAGGTTTCAAATCGTTGAAAAGCCCCCCATGCCTAC
ACAAAAACCCACAACCGACGCGACTTTGGTAATGGCCACCGACGTGCCGG
GCACTGCCGCCACCGAGGAGCCTGCTGTCCTTACCGATAACGAGGTTGCT
CCCGTGGTGCCTACCCCGGCTGTCAAACCATCCGAGACTGAGAACCTTGC
TCCGGCATCTATTTTGCCCCTGCCGGAGGAAGAAACATCCGAGAGTGCTG
AAAATGGCCAGCCTCCCGCTATGATGCCTAGTCCTCTGATGCCTGAAGCT
GCTGACAACTCGTCGTCTGTGCCATTGCCGGCCACCGTGGAATCCACACC
GGCGCCCTCTGTGAACTCGAGCTTGCCTCATCCTCTGAGCTCTGAGTCCG
GCCCTCTAGACGGCGGAAAGGGGACAAGCGAGTCACACACGACCGGACTT
TCCTCCCGAGGAACTTTTCCGCTCCAGCTTGGAGTTGCACCTTCTGGGAA
TGCATCTGCTGCCCCATCGACAGTCGACGCAGCGTCAAATGGCTCCCACG
CTGTGGTCGGCGGGTCGCAAGGCCTGAACGAGACACTTGCTCATGCCCTC
AACGAAACAGCTTCTCACCACTCTATTAATTCCCAAGCTCAGTCTTCTAC
GGACTCAGAAACGCACCCCCTGAGCCTGAACGGGACAGGGGCTGTGAACG
GATCAGCGGCGCACATGCCCTCGGGGAATGCCACGTCCGGCGAGGTCTCC
GTCCACGGGAGCGGGTTGGACGGGGCAGTGTCCGTGAATGGAAGCCTTGC
CAGCGGCCATGCGAATCTAAACGCCACAGGCATTGCCAACGGGACATCGT
CTTCCGTCCCGCTCAATGCAACAGGCGCTGTCGGTATTAACGCGACGCTG
CCCGGTGGACCGGCGGGAGCCCCAGAGGTACCCCCTCTCGCCCCGTCACT
CAATGGCACACTCCCCATGGCAAATACAAACGATACGTCAGGCGTTTCGG
CCCTCGCCCCATCCTCACAAGGCGTATCAGAGGGCGGAGAGGTGGCTGAG
AGGGACCCTGAAGCGGCGGAGGAGGACGCAGCTGACGTGGGCAAAGATGG
GGAGTCGGGCCAGAACGAAGACACAAGCGCTGCGCTTGCAACCAACGAGA
CCATTCCTGCAGTAGCCACACCCCAAAGCTCCATCGAGACGGGCCCAACG
ATCCTCTCTACCCCGGCTCCCACCTTGACCGAGGTTTCGGAAGGGGCCCC
GATGGCCACCGGCGCCGAGGGCGTGGTCGAGATCGGCGCGGGTGCCTCGG
GCCAGGCCTTGCCTAGCGCCACGCCGACAAACATGCCACCTGCCCCGCCT
GCCATAACCAGCGCACCTCCTGGCACGACGAATGCCACTGGACTGCCCCC
GCCTGCCGCTGCCAACGCGACGTTTCCGCCCACCGTACCGGCTACCCTGA
CAAATCCGGAGGCTCCCAGCGCCGGCGATGCGATTGCTTCACCTCCTGTG
GCGGACGGGTCTCCCGTGATTCCTACGCCTGCCCCCCTGGATGCTTCTCT
TCCAACCCTCTCCCCGGCTGCCCCGCTCCCTACGGCAGTGCCCGCCGTCG
TCGCGACCCCACCCCCCGCTCTTTCCGCCACCCTTCCCCCTTCTGCGACA
TCTACCCAGCCGGCTGCCGCGACGGACACAGCCGCGCCTTTGACAGTTCC
CCCCACCGCCCCTGTCACAGGCGTTCCAGCCGTCCCCACGTCTCTTCCAC
CCACGCTACCACCAGCCCCGGTCTCCACGCCCGCGGCGACCCTCTCCCCG
GCCTCGCCTGTGGGCACCGTAGCGCCCACCCTTGCTCCAGTGGATGTCTC
AGCCGCAGAGTCTGTCGCCTCGCCCACTGACATGCCAAGTGTGCCGGCTG
CAACGTTGCCTCCAGCGGCCTCCCTTGGCACGGCCGCCCCGACTGTACCT
CCTGCCGCTCCCAGCGTCACCAGCACAGGCACTTTGTCCACTGACGCGCC
ACCTGTGCCTGCTGCGACGTTGCCTCCAGCGGCCCCGCTT back to topprotein sequence of rna5723 >rna5723-protein ID=rna5723-protein|Name=rna5723|organism=Nannochloropsis gaditana|type=polypeptide|length=175bp
PSVTSTGVPAAATLPNSMGTPATAPATAINTTLAPATAPSLPIQPPTQPA
AGAVTNSPGQPSEGPKDVETRSPTLSPTSTVPITSPLDEDAPLDEDEHTN
APPIGAADIVPIPSANASVPISTSTEAPEPDFPSPGLVTPPTLPPSLPAV
TPAIPLPTEAPPQKHGNLRARHGLW back to topmRNA from alignment at CM002466.1:678051..679055+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5723 ID=rna5723|Name=rna5723|organism=Nannochloropsis gaditana|type=mRNA|length=1005bp|location=Sequence derived from alignment at CM002466.1:678051..679055+ (Nannochloropsis gaditana)
CCAAGCGTCACCAGCACAGGTgtccctgctgctgccacgTTGCCGAACTC
GATGGGCACGcccgccacggcccccgCCACTGCAATCAACACCACTCTTG
CCCCAGCGACAGCCCCCTCTCTACCCATCCAGCCTCCGACGCAGCCTGCG
GCTGGTGCGGTCACAAACTCTCCTGGTCAACCCTCGGAAGGGCCAAAGGA
TGTTGAGACACGCTCGCcgaccctctcccccacgtccacgGTGCCCATCA
CTTCGCCtttggacgaggacgcccccctggacgaggacgaacaCACCAAC
GCGCCGCCCATCGGCGCGGCAGACATTGTCCCTATTCCGAGTGCGAATGC
GTCTGTCCCAATCTCCACCTCTACAGAGGCGCCCGAGCCCGATTTTCCGT
CGCCGGGTCTGGTCAcgcctcctaccctccccccctcgctccccgcGGTG
ACACCTGCGATTCCATTACCCACAGAAGCCCCCCCACAAAAGCATGGAAA
CCTTCGTGCACGCCACGGACTTTGGTGAGATTTGTCTCTCGTGATTTCGG
CTGTTACCGGTTTATGTCTGTGAACACCTTTTTAAAACCGACCAAGGCAG
GCAGCCGTAGTGGAGAGAACGCGGGGCAGACGACGTCGAGAAAACCCCTC
CCCCTATTGTGTCGCCAAGACGTCATGTTTCTTGCCAGGAATGTCGGATA
GATGTGGCCGTGCTAATCACTTCTGACAGATTTTACGCTGAAGCACTTAT
ATAGGGTTTGCGCCTGAATTCACGGAGGCAAGGGCGTTTTCCAGCACCTT
TTTCGGGAATCCAATCATCACATAATCAATTGGAGGTCTTACATACAATC
TGCTCATTCAATCACCTAGAGTAACAGAGAGTTTGGGAAAGAAGGTCTCC
TTAAAACCGACAGACACACATAGTTCGAATCCGTCACGTTCATTACCGAG
CATCAGATAAGTTTTTTAAAGAAAAATGTTGGGATTTCGCAAACCACAGT
TCCTA back to topCoding sequence (CDS) from alignment at CM002466.1:678051..679055+ >rna5723 ID=rna5723|Name=rna5723|organism=Nannochloropsis gaditana|type=CDS|length=528bp|location=Sequence derived from alignment at CM002466.1:678051..679055+ (Nannochloropsis gaditana)
CCAAGCGTCACCAGCACAGGTgtccctgctgctgccacgTTGCCGAACTC
GATGGGCACGcccgccacggcccccgCCACTGCAATCAACACCACTCTTG
CCCCAGCGACAGCCCCCTCTCTACCCATCCAGCCTCCGACGCAGCCTGCG
GCTGGTGCGGTCACAAACTCTCCTGGTCAACCCTCGGAAGGGCCAAAGGA
TGTTGAGACACGCTCGCcgaccctctcccccacgtccacgGTGCCCATCA
CTTCGCCtttggacgaggacgcccccctggacgaggacgaacaCACCAAC
GCGCCGCCCATCGGCGCGGCAGACATTGTCCCTATTCCGAGTGCGAATGC
GTCTGTCCCAATCTCCACCTCTACAGAGGCGCCCGAGCCCGATTTTCCGT
CGCCGGGTCTGGTCAcgcctcctaccctccccccctcgctccccgcGGTG
ACACCTGCGATTCCATTACCCACAGAAGCCCCCCCACAAAAGCATGGAAA
CCTTCGTGCACGCCACGGACTTTGGTGA back to top
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