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Properties
| Property Name | Value |
|---|
| Product | alkaline phosphatase d |
| Orig transcript id | gnl|cribi|Naga_100068g17.2427.mrna |
| Orig protein id | gnl|cribi|Naga_100068g17.2427 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:571651..573697 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5682 ID=rna5682|Name=rna5682|organism=Nannochloropsis gaditana|type=mRNA|length=1301bp
GGAGGGATGGACCGAGGGATGCCTGAGCGTCGGCCCTTGCGTCGATTTGC
GCCCAGTGCCGGGGAGGACTTGTCGCGGCCGCGCCGTTTTGAGGACAGTC
GCACGCCCCCCCCCTATGGGAGCCGAGGGAACAGCCCCGGCTTGCCGTTC
GAGGGGGAGAGGGGAATGGATCGGATGGACCGCTCCGGTGTGGGGCCCGG
TGGGAGGGGGGTTGAGGCCGCGGCGGCCGCGAAAGCTGCGGAGGCTGCCG
CCAAAGCGGCCGAACAGGAAGAGAAAAAAGCGAAGCGGGAGCTGGAGGCG
GCGAAACGTGCGGCAGAAGAGGAAGCCCGGCGGGCTGCCAAGGAAGCGGA
AGTGCTGCGTCTGAAGGAGGAGAAGGAGGCGAAAGCAAAGGCGGCGGCGG
AATGTGCCGATGTGGCTAAGGCCTTGGTCGCTTCGGGGTTGAAAGGGAAA
GAGCTGTGGGCGGCGGCACAGGAAAAGGGCGATGCGGCGAAGGGCTCGGC
GATTTTGGAGGTGGTTCTAGGGTCCGTGGATTCAAACGAGGCCTTGGCCA
GCCTAGGCTGGATGGCGGGGGCCCAGTACGGGACAGTGCTGAAGCGCCGG
CTGGCTAAGGATACAACCGATCAGAAGGAGGCCGTGTACGCGGTGCAACG
GGTCGTGGAGGCAAGAGGATATCCTAAAGTGGGCGGTGACCCCTTGCTGG
AGAAGCTCTTCCATGGCCTGTACGGAGCGGACTTATTGGACGAGGCAGCC
TTCACCGGGTGGCGTGACGACGACCGTGAAGAGGGAAACAAGCGAAAAGC
GGTTGTGCAGACCACGCCCTGGTTCCAATGGCTGGAGACGGCGGACGAAG
ATGATGATGATGAGGAAGAGGACGATGACATAGAAGAGTTGAACAATATT
TAATTTTTGGGAGGAATGCATTACTTGACAACTAGAAGGCACACATAGAA
GGTCTGGACAAGAACGAAGTGAATCGTTATGTCTGCTTAACAATACTTGC
GACAAAGTCAAAGCCCAGAGACGACGGTGGAGCAAAGATAGATGAATGCG
GACGAGAAAGAAGTTAGTCCACAACAGCCTCTACGTTCCAATTTCAGCCG
CATGTTGCTAAGACGTCGTCCACAACGGTGACCTGGATTAAGATTTAGAG
CTGAGAAAAGGCATCAATATGGAACAGGCAAATCAAGCAACGAATGAAGT
TTTGGCTGCTTACATTTATGAGCTCTCATCAATTGTTTTCTTTGTAGAAA
CTGCAAGGCAATCAAGGAAGGAAATAGGAATTGCAGTCTCCGCAAGGGAA
A back to topprotein sequence of rna5682 >rna5682-protein ID=rna5682-protein|Name=rna5682|organism=Nannochloropsis gaditana|type=polypeptide|length=476bp
MAAAAMSSRMPGLMLVLSIFFTFMLQEHLFSLAEEQGDTMKQMAAELDGH
YENQTLTRVAFGSCNKQWRTNVLWDNIVDFHPQAYLWLGDAVYVKEKEGD
NDANLRRAYSRQLKNKGYQRLLSSGAIIEGVYDDHDMSTNDGHKVNYTPQ
RQSAYLDFLGHVSEDSPRRSRLGLFSAHVFGEPPRQVKVIFLDVRSLSDE
PAIVVPECVANLLWPVKPYLLALTRWAAVLLGITGRFHGDMLGTEQWSWL
EAQLAGSEASFHVLVSTVQVLSVNPIAEGWGHYPAAQSRLLALLRKHRPR
GLVILSGDVHFAELLVTQPPSEGMREEEKEGKKEALEVTSSGMTHTCFAT
TMGTCEMAVDRYDRHRLTPCSFFGGLNYGTIELDWEQQEAWVRVRNKRGE
AVLQTFRRLDGSSPGAYLGEPWSINENNDLSFFIFAFLCVVSLASGVLWV
FRWLLKRHCSKDEGRDRKIGQAKKEA back to topmRNA from alignment at CM002466.1:571651..573697+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5682 ID=rna5682|Name=rna5682|organism=Nannochloropsis gaditana|type=mRNA|length=2047bp|location=Sequence derived from alignment at CM002466.1:571651..573697+ (Nannochloropsis gaditana)
CAAGCCCATCTGTGAATGTTGTTTATTCGCCAGGCCTCGGGCAGCCAGAG
CCCATCAGCTCGCACCGGCAACAAAGAAATGGTGACTGATCTCGAACATA
TTTCTCGTCAGGTGTCGCAGCCATAGTGTCAGGTGGTCGTCGCCGTAGAA
AAGAAGGGCGTCCTTACTTCATGGCAGCCGCGGCGATGTCATCACGAATG
CCTGGTCTGATGCTCGTTTTGAGTATATTTTTCACTTTTATGTTGCAAGA
GCATCTGTTCAGTCTCGCTGAGGAACAAGGTGACACAATGAAGCAGATGG
CTGCAGAGTTGGATGGGCACTACGAAAATCAGACGCTGACTCGAGTAGCA
TTTGGCTCTTGCAACAAACAGGTAAGCCTCTATTGATTTTCATTCTAGCA
CACAGTAAGCAATTTAGAACAAAATGATTTGAGAAAGCAAATTCTTTCCA
CTGACAAGCGTAACGACTGTGCGGAATCGATTGTCTTGTGAGCAATACGC
AAGATGCAGCGATGCATCACAACCTTCTCTCTTCGTGATTGGCATTCCAC
ATTGACACACCTTGATCCTTCATTTACACAGTGGCGGACCAATGTTTTAT
GGGACAATATCGTGGACTTTCATCCTCAAGCGTATCTGTGGCTGGGTGAC
GCCGTGTACgtcaaagaaaaggaaggtgaCAATGACGCCAACCTTCGGAG
AGCCTACTCCCGCCAGCTGAAAAATAAAGGCTACCAACGTCTGCTGAGCT
CGGGTGCAATAATCGAAGGCGTATATGATGATCATGACATGTCTACGAAT
GATGGCCATAAAGTGGTGCGTGTCCAGAGGAACAATGAGATGTTTGTACC
AGTGTTCCGAAAAGGATCGAcctctcactccctcccatcgATTTCTCGCA
TTTTTTTCTCTAGAATTATACCCCTCAACGCCAGAGTGCTTATTTAGACT
TCCTTGGACATGTTTCTGAAGATTCTCCCAGACGATCTCGGTTGGGATTG
TTTTCCGCTCACGTCTTTGGAGAGCCACCGCGCCAAGTTAAAGTCATTTT
CCTGGACGTCCGCTCCTTAAGCGACGAGCCAGCCATTGTGGTACCAGAGT
GTGTAGCTAATCTTTTATGGCCTGTGAAGCCCTATCTTTTAGCGCTTACG
CGATGGGCTGCCGTCCTCCTGGGCATCACCGGACGCTTTCACGGCGACAT
GCTGGGGACCGAGCAGTGGTCATGGCTGGAGGCACAACTGGCAGGTTCAG
AGGCCTCTTTTCACGTCCTTGTCTCTACCGTTCAGGTCTTATCTGTGAAT
CCCATTGCGGAGGGGTGGGGCCACTACCCGGCCGCACAAAGTCGGTTGCT
TGCACTTTTGCGGAAGCATCGGCCCCGCGGATTGGTTATCCTCTCCGGGG
ATGTACACTTTGCAGAACTTCTCGTGACGCAACCACCTAGCGAGGGGatg
agagaagaggagaaggaggggaagaaggaggccctggaggtaACAAGCAG
TGGAATGACCCATACGTGcttcgccaccaccatgggTACGTGTGAGATGG
CGGTGGATCGTTACGATCGACACCGTTTGACGCCTTGCAGTTTTTTCGGG
GGCCTCAATTATGGAACCATTGAGCTAGACTGGGAGCAACAAGAAGCCTG
GGTGAGAGTGCGGAATAAACGTGGGGAAGCTGTTCTTCAAACTTTCCGTC
GACTTGATGGAAGCTCTCCGGGCGCCTATTTAGGTGAACCATGGTCTATT
AATGAGAACAATGATCTCAGCTTCTTTATATTCGCTTTCCTGTGTGTTGT
CTCACTCGCCAGTGGAGTGCTATGGGTCTTCAGGTGGTTGTTGAAACGCC
ATTGCAGtaaggacgagggaagagacagaaagaTTGGACAGGCAAAAAAG
GAGGCATAATCGAAAGCCATACCTACTCAAAAGCTGGGCTTTGTACAGTT
GTCGCGCCAAACCATGAAGAAAGAacagaaagaaaaggatcCACGCAACA
TCGGGTCTAACCTCGTTGTCCCtctggaagaagaaaatatcTCATTT back to topCoding sequence (CDS) from alignment at CM002466.1:571651..573697+ >rna5682 ID=rna5682|Name=rna5682|organism=Nannochloropsis gaditana|type=CDS|length=4293bp|location=Sequence derived from alignment at CM002466.1:571651..573697+ (Nannochloropsis gaditana)
ATGGCAGCCGCGGCGATGTCATCACGAATGCCTGGTCTGATGCTCGTTTT
GAGTATATTTTTCACTTTTATGTTGCAAGAGCATCTGTTCAGTCTCGCTG
AGGAACAAGGTGACACAATGAAGCAGATGGCTGCAGAGTTGGATGGGCAC
TACGAAAATCAGACGCTGACTCGAGTAGCATTTGGCTCTTGCAACAAACA
GTGGCGGACCAATGTTTTATGGGACAATATCGTGGACTTTCATCCTCAAG
CGTATCTGTGGCTGGGTGACGCCGTGTACgtcaaagaaaaggaaggtgaC
AATGACGCCAACCTTCGGAGAGCCTACTCCCGCCAGCTGAAAAATAAAGG
CTACCAACGTCTGCTGAGCTCGGGTGCAATAATCGAAGGCGTATATGATG
ATCATGACATGTCTACGAATGATGGCCATAAAGTGAATTATACCCCTCAA
CGCCAGAGTGCTTATTTAGACTTCCTTGGACATGTTTCTGAAGATTCTCC
CAGACGATCTCGGTTGGGATTGTTTTCCGCTCACGTCTTTGGAGAGCCAC
CGCGCCAAGTTAAAGTCATTTTCCTGGACGTCCGCTCCTTAAGCGACGAG
CCAGCCATTGTGGTACCAGAGTGTGTAGCTAATCTTTTATGGCCTGTGAA
GCCCTATCTTTTAGCGCTTACGCGATGGGCTGCCGTCCTCCTGGGCATCA
CCGGACGCTTTCACGGCGACATGCTGGGGACCGAGCAGTGGTCATGGCTG
GAGGCACAACTGGCAGGTTCAGAGGCCTCTTTTCACGTCCTTGTCTCTAC
CGTTCAGGTCTTATCTGTGAATCCCATTGCGGAGGGGTGGGGCCACTACC
CGGCCGCACAAAGTCGGTTGCTTGCACTTTTGCGGAAGCATCGGCCCCGC
GGATTGGTTATCCTCTCCGGGGATGTACACTTTGCAGAACTTCTCGTGAC
GCAACCACCTAGCGAGGGGatgagagaagaggagaaggaggggaagaagg
aggccctggaggtaACAAGCAGTGGAATGACCCATACGTGcttcgccacc
accatgggTACGTGTGAGATGGCGGTGGATCGTTACGATCGACACCGTTT
GACGCCTTGCAGTTTTTTCGGGGGCCTCAATTATGGAACCATTGAGCTAG
ACTGGGAGCAACAAGAAGCCTGGGTGAGAGTGCGGAATAAACGTGGGGAA
GCTGTTCTTCAAACTTTCCGTCGACTTGATGGAAGCTCTCCGGGCGCCTA
TTTAGGTGAACCATGGTCTATTAATGAGAACAATGATCTCAGCTTCTTTA
TATTCGCTTTCCTGTGTGTTGTCTCACTCGCCAGTGGAGTGCTATGGGTC
TTCAGGTGGTTGTTGAAACGCCATTGCAGtaaggacgagggaagagacag
aaagaTTGGACAGGCAAAAAAGGAGGCATAAATGGCAGCCGCGGCGATGT
CATCACGAATGCCTGGTCTGATGCTCGTTTTGAGTATATTTTTCACTTTT
ATGTTGCAAGAGCATCTGTTCAGTCTCGCTGAGGAACAAGGTGACACAAT
GAAGCAGATGGCTGCAGAGTTGGATGGGCACTACGAAAATCAGACGCTGA
CTCGAGTAGCATTTGGCTCTTGCAACAAACAGTGGCGGACCAATGTTTTA
TGGGACAATATCGTGGACTTTCATCCTCAAGCGTATCTGTGGCTGGGTGA
CGCCGTGTACgtcaaagaaaaggaaggtgaCAATGACGCCAACCTTCGGA
GAGCCTACTCCCGCCAGCTGAAAAATAAAGGCTACCAACGTCTGCTGAGC
TCGGGTGCAATAATCGAAGGCGTATATGATGATCATGACATGTCTACGAA
TGATGGCCATAAAGTGAATTATACCCCTCAACGCCAGAGTGCTTATTTAG
ACTTCCTTGGACATGTTTCTGAAGATTCTCCCAGACGATCTCGGTTGGGA
TTGTTTTCCGCTCACGTCTTTGGAGAGCCACCGCGCCAAGTTAAAGTCAT
TTTCCTGGACGTCCGCTCCTTAAGCGACGAGCCAGCCATTGTGGTACCAG
AGTGTGTAGCTAATCTTTTATGGCCTGTGAAGCCCTATCTTTTAGCGCTT
ACGCGATGGGCTGCCGTCCTCCTGGGCATCACCGGACGCTTTCACGGCGA
CATGCTGGGGACCGAGCAGTGGTCATGGCTGGAGGCACAACTGGCAGGTT
CAGAGGCCTCTTTTCACGTCCTTGTCTCTACCGTTCAGGTCTTATCTGTG
AATCCCATTGCGGAGGGGTGGGGCCACTACCCGGCCGCACAAAGTCGGTT
GCTTGCACTTTTGCGGAAGCATCGGCCCCGCGGATTGGTTATCCTCTCCG
GGGATGTACACTTTGCAGAACTTCTCGTGACGCAACCACCTAGCGAGGGG
atgagagaagaggagaaggaggggaagaaggaggccctggaggtaACAAG
CAGTGGAATGACCCATACGTGcttcgccaccaccatgggTACGTGTGAGA
TGGCGGTGGATCGTTACGATCGACACCGTTTGACGCCTTGCAGTTTTTTC
GGGGGCCTCAATTATGGAACCATTGAGCTAGACTGGGAGCAACAAGAAGC
CTGGGTGAGAGTGCGGAATAAACGTGGGGAAGCTGTTCTTCAAACTTTCC
GTCGACTTGATGGAAGCTCTCCGGGCGCCTATTTAGGTGAACCATGGTCT
ATTAATGAGAACAATGATCTCAGCTTCTTTATATTCGCTTTCCTGTGTGT
TGTCTCACTCGCCAGTGGAGTGCTATGGGTCTTCAGGTGGTTGTTGAAAC
GCCATTGCAGtaaggacgagggaagagacagaaagaTTGGACAGGCAAAA
AAGGAGGCATAAATGGCAGCCGCGGCGATGTCATCACGAATGCCTGGTCT
GATGCTCGTTTTGAGTATATTTTTCACTTTTATGTTGCAAGAGCATCTGT
TCAGTCTCGCTGAGGAACAAGGTGACACAATGAAGCAGATGGCTGCAGAG
TTGGATGGGCACTACGAAAATCAGACGCTGACTCGAGTAGCATTTGGCTC
TTGCAACAAACAGTGGCGGACCAATGTTTTATGGGACAATATCGTGGACT
TTCATCCTCAAGCGTATCTGTGGCTGGGTGACGCCGTGTACgtcaaagaa
aaggaaggtgaCAATGACGCCAACCTTCGGAGAGCCTACTCCCGCCAGCT
GAAAAATAAAGGCTACCAACGTCTGCTGAGCTCGGGTGCAATAATCGAAG
GCGTATATGATGATCATGACATGTCTACGAATGATGGCCATAAAGTGAAT
TATACCCCTCAACGCCAGAGTGCTTATTTAGACTTCCTTGGACATGTTTC
TGAAGATTCTCCCAGACGATCTCGGTTGGGATTGTTTTCCGCTCACGTCT
TTGGAGAGCCACCGCGCCAAGTTAAAGTCATTTTCCTGGACGTCCGCTCC
TTAAGCGACGAGCCAGCCATTGTGGTACCAGAGTGTGTAGCTAATCTTTT
ATGGCCTGTGAAGCCCTATCTTTTAGCGCTTACGCGATGGGCTGCCGTCC
TCCTGGGCATCACCGGACGCTTTCACGGCGACATGCTGGGGACCGAGCAG
TGGTCATGGCTGGAGGCACAACTGGCAGGTTCAGAGGCCTCTTTTCACGT
CCTTGTCTCTACCGTTCAGGTCTTATCTGTGAATCCCATTGCGGAGGGGT
GGGGCCACTACCCGGCCGCACAAAGTCGGTTGCTTGCACTTTTGCGGAAG
CATCGGCCCCGCGGATTGGTTATCCTCTCCGGGGATGTACACTTTGCAGA
ACTTCTCGTGACGCAACCACCTAGCGAGGGGatgagagaagaggagaagg
aggggaagaaggaggccctggaggtaACAAGCAGTGGAATGACCCATACG
TGcttcgccaccaccatgggTACGTGTGAGATGGCGGTGGATCGTTACGA
TCGACACCGTTTGACGCCTTGCAGTTTTTTCGGGGGCCTCAATTATGGAA
CCATTGAGCTAGACTGGGAGCAACAAGAAGCCTGGGTGAGAGTGCGGAAT
AAACGTGGGGAAGCTGTTCTTCAAACTTTCCGTCGACTTGATGGAAGCTC
TCCGGGCGCCTATTTAGGTGAACCATGGTCTATTAATGAGAACAATGATC
TCAGCTTCTTTATATTCGCTTTCCTGTGTGTTGTCTCACTCGCCAGTGGA
GTGCTATGGGTCTTCAGGTGGTTGTTGAAACGCCATTGCAGtaaggacga
gggaagagacagaaagaTTGGACAGGCAAAAAAGGAGGCATAA back to top
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