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Properties
| Property Name | Value |
|---|
| Product | rna helicase |
| Orig transcript id | gnl|cribi|Naga_100068g14.2446.mrna |
| Orig protein id | gnl|cribi|Naga_100068g14.2446 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:557700..562226 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5679 ID=rna5679|Name=rna5679|organism=Nannochloropsis gaditana|type=mRNA|length=1905bp
ATGGCATTGCGCGGCGTCTTGGGGAGCCTGCCGGTGCTGGACCATAGTGT
TGCTTTCGAAGTTTTGCCGGCAAAAAATGTGGGCCTAGTCATGGGTATGG
ATGTGGTGGCGCGCACCGGGGAGGAATACATTTGCGCTACAACAGACTGG
TGGCCTCCAACCAAATGCGACTACGGGACTTGCGCCTGGAGCGACGCTCC
ATCCGGGTCAAACCCTTCCATTCCCAACCTGGACTTAAACAAGCCACTGT
TCAAGGCCGCCTTTGATGCACTGTCTCCGTTTATCTGGAGGTTGGGTGGA
TCGCTGCAAGATGATATCACGTACGAGGAGCCCGGCAATCCGGAGGTGAC
ATGCCCGCCCATAACGAACGATCCCGATGCGCAGTGGGGCTTCATTGGGG
GCTGCTTGACTCGTGCGCGATGGACAGAGATAGCCAGCTTTGCTCGAGAC
CACAATGCCAAGCTCGTCTTTGGGTTGAACGGCTTGCATGGCCGGAGGCA
CGTCAAGGACCGAGAGTGGACCGGGAGCTGGGACCCGACCAACGCCAAGT
CCCTCATGTCGTACACGAAGGAGTCAGGCCTTCCAATACATGCATGGGAG
CTGGGAAACGAGCTTGGGGGATGGAATGGGATTCAAGCCCAATTGGGAGC
CCAAGAGGTGGGCCGGGACTTCGTCGCCCTCAGGAGTATTGTCACGGAGC
TTTGGGGTAGCGGAGAGGGGTCCCCCCTCATAGTAGGTCCCGACACCGGC
CTCGACATACCCTGGTTCACCGACTTTCTGAAAGCCGCGAACGGAAGCCT
GGACGCAGTGGCCATCCACATGTACGCCTTGGGCGCGGGGGTGGACCCCA
CCCTGGCCGAGAAGATCATGGATCCTGCTCACATGGCCACCGCCTCCAAG
ACGGCTCAAGACTTGGCGACGCTGATCACGAACCTCGCGGCGACAAGTGG
CGAGGAAGTGCCTCAGCTCTGGATGGGCGAGGATGGCGGGGCTTACAACT
CGGGGCGCAACGGGACGACGAATCGTTTTACGGCAGGCTTCTGGTCCCTG
AACGAGCTGGGGATCTTTGCCCGGGCAGGCTTTTCTGTGTACTGTCGACA
GACCCTTCTGGGAGGGAACTACGGTCTGCTTGACAAGGACACCCTGCAGC
CGAATCCTGATTTCTTCAACTACCTGCTTTTCAAGCGGCTAATGGGCCCA
GAAGTGCTGGACGTGCAGAGCAGCCGCAGGGAGGTGACAGCCTACGCGCA
TTGCACGCGTCGAGGAATCGCAGGATTTCCGATATTTGAGGCTGGGGCTG
TGACCGTGCTGATATTGAATTTTATGAGTGACTTCGACGCGGAGATCGGG
ACTATGACGGTCACCAGAGACGCCCAGAAGGATCTGTTGACGGGACCGCG
CCTGGAGTACACTTTGACGTCGGGGACGCCGGGCGAACTGAACTCAACGT
TCTCAAACTTGAATGGACAGCCATTGCGAGTGTCGGAAACGGGCATTTTC
CCAGCGATGCTCCCTTTGATCATCCAAAGGGAGCAGACGCTGACTGTACC
CAAACAGTCGTACGGCTTCTATGTTTTTCCGGAAGCAAGAGTGCAGGCTT
GGGACGGGATTTATGTCGAGTTTTGTAATATCGCCAGGAATGTTTTGAGA
AAAGGAAAGAGATTAGGGACCTCAGAGTGGGGCAAGTTGTTCGAATGTAC
TGCATACTCAGAAAGGCATCCAGATAGGACGCGAGACTATAGAATTTTGT
CCATGACGAGACACGGGGCCAGCATGGGGCAAATCAAACATAGGTGTGTC
TACTTGGATGGAATGGCACGTTGGCAGGTGCACAGCACAAAATCGGACTT
TGTATTGTTAGTAGGGTCACTTAAGGCTCCCTCTGTGCGGCCTAACATGA
AATGA back to topprotein sequence of rna5679 >rna5679-protein ID=rna5679-protein|Name=rna5679|organism=Nannochloropsis gaditana|type=polypeptide|length=803bp
MSKEALFLAGESSRMGHPRGRKSKQRNAPGLNGAHLEIHSPLPQLDTVIP
FPVCSPPESSVAFSPRKNPWQPSPPHHERHPAPSPPNFRHTWVTPTLPHQ
SPSPRCNWIGLNPMFLPGFPVVQPQSRTAQPLPGAGPEMPTPIFLTRSSW
EKGLGDIIACESSTRHLSSSKHGVRIEVPVKEGLQKCEVLDMTRGGVQGL
AERLSLHPQQESHSRAETSCIWKSDPLAALDLGVVATKARSAAVEEEAFL
PRGYEGAPAVVLNLHEDTMDEPEESSAGTETEQESTAGGYSPMHASRLLR
IVNDCPGPYVLREVLILPKDETTSACWIEVEVGGWIFSSQSGRMPWKCSL
REMSPSREEKFWTGAPEILLCFGISDAHVTIKVEPESESRIVKKWVLFRI
ETPGMGPAHDFQYHSFVLGRKVVASVADRAAQALLNVEARAFVPQGLRRY
FDEPCNMVSHPDEPSPFQPVGMANVLRYLPHYFLPDDIRRAFLGFRAAKL
SERSDPYALFGIVKSPTTVLEYCRNMRAMLYLEEAQAGEDVRRYDLFGVP
ITYREKSKDKPNTPLVATISVPGAAEKRPPLAYGDCVRLRPSSLPAIGSG
RRVMVEMRAVVLETREEKVKILLPPKFPTSMFPSDSRFHIRFTYDRYGFR
FLHRALYGFSTPAPARRIFPNFFFPPEGGGPEGGENEQRGGKIRAVAVDE
AAIQWVNHIINEEQRRAVLDIVNQTQGSLPYILYGPPGTGKTLTVIEAIL
QICRHHPRSKVLAVAPSDVAADILAERLSEHMEPKQLFRLNWCQVSWTRE
MIK back to topmRNA from alignment at CM002466.1:557700..562226- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5679 ID=rna5679|Name=rna5679|organism=Nannochloropsis gaditana|type=mRNA|length=4527bp|location=Sequence derived from alignment at CM002466.1:557700..562226- (Nannochloropsis gaditana)
AGCGTTCACTGGTGTCGCGTGCCTGCGAAAGCTTCCATATTATTCTTTAA
ATTTTAACACACACCAAAAATCGCAGATAGAAAGAGAATGGCATAGGTGC
AGAACGATGACAAAACAAAATGTCTAAAGAAGCCCTATTTTTGGCCGGGG
AAAGTTCAAGAATGGGGCATCCTCGTGGACGTAAAAGCAAGCAACGCAAC
GCGCCTGGATTAAATGGAGCTCATCTGGAGATACATTCGCCTCTGCCTCA
GTTAGACACTGTTATACCATTTCCAGTTTGCTCGCCCCCCGAAAGCTCTG
TCGCGTTTTCTCCTCGAAAGAACCCTTGGCAACCCTCGCCTCCTCATCAT
GAGAGACATCCCGCGCCCTCACCGCCGAATTTTAGACATACATGGGTAAC
ACCGACGCTTCCACATCAATCTCCATCTCCACGTTGTAACTGGATAGGAC
TGAATCCGATGTTCCTTCCCGGATTTCCTGTCGTTCAACCCCAATCTCGT
ACTGCCCAGCCTCTGCCCGGAGCCGGGCCTGAGATGCCGACGCCCATCTT
TCTGACGCGGAGCTCCTGGGAAAAAGGATTGGGCGATATAATTGCGTGCG
AATCCTCCACGAGACATCTGTCATCAAGCAAACACGGGGTACGCATTGAA
GTGCCGGTTAAGGAAGGGCTCCAGAAATGCGAGGTACTCGACATGACACG
CGGCGGCGTGCAGGGACTGGCGGAACGGCTTTCGTTGCATCCCCAGCAAG
AATCGCACAGCCGAGCAGAGACTTCCTGCATTTGGAAGAGTGACCCTTTG
GCGGCGTTGGATCTCGGAGTGGTGGCTACCAAGGCAAGGAGCGCTGCAGT
TGAGGAGGAAGCCTTCCTTCCTCGCGGCTATGAAGGTGCCCCTGCAGTCG
TTCTGAATTTGCATGAAGACACAATGGACGAACCCGAGGAGAGCAGCGCG
GGAACAGAAACGGAGCAGGAATCCACTGCAGGTGGATACTCCCCGATGCA
TGCGAGTCGCCTGCTGCGCATTGTCAACGACTGCCCCGGTCCCTACGTGC
TGCGGGAAGTCCTGATCTTGCCCAAGGATGAGACCACGTCTGCGTGTTGG
ATCGAGGTGGAAGTAGGAGGCTGGATATTTTCCAGCCAGAGTGGGCGCAT
GCCGTGGAAATGTTCATTAAGGGAGATGTCCCCGTCCCGTGAGGAAAAGT
TTTGGACGGGAGCCCCAGAGATCCTGCTTTGTTTCGGCATTTCAGACGCA
CACGTCACGATCAAGGTGGAGCCCGAATCGGAGAGTCGGATCGTCAAGAA
GTGGGTGCTTTTCCGCATCGAAACTCCCGGTATGGGCCCCGCGCACGACT
TTCAGTACCACAGCTTCGTGTTGGGACGGAAGGTCGTTGCCTCTGTCGCC
GACAGAGCAGCCCAAGCCTTGTTGAACGTGGAGGCGCGAGCTTTCGTTCC
TCAAGGACTTCGAAGATACTTTGACGAACCCTGTAACATGGTATCCCATC
CGGATGAGCCCTCCCCCTTCCAACCTGTGGGAATGGCGAATGTTTTGCGA
TACCTCCCTCACTACTTCCTCCCCGATGACATCCGGCGGGCGTTCCTCGG
CTTTAGGGCGGCCAAGTTAAGTGAGCGTTCAGATCCCTACGCTCTGTTTG
GCATCGTCAAATCTCCGACGACTGTGTTGGAATATTGCAGGAACATGCGG
GCGATGCTCTACCTTGAAGAGGCCCAGGCGGGGGAGGACGTCCGCAGGTA
CGACTTGTTCGGCGTGCCCATCACCTACCGCGAAAAATCGAAAGATAAAC
CGAACACACCGCTGGTGGCGACCATAAGTGTGCCAGGGGCGGCTGAAAAG
AGGCCTCCCCTTGCGTACGGCGATTGTGTCCGTCTCCGTCCAAGCAGTCT
CCCCGCGATCGGCTCAGGGCGACGCGTCATGGTGGAGATGCGAGCAGTCG
TGCTGGAGACGCGCGAGGAAAAAGTCAAGATTTTACTCCCGCCAAAATTC
CCAACGAGCATGTTTCCATCCGACTCTCGCTTCCACATACGCTTTACGTA
CGATCGATATGGATTTCGGTTCCTGCACCGGGCACTATACGGTTTCAGCA
CGCCGGCCCCGGCCAGGAGGATATTTCCGAATTTTTTCTTTCCGCCTGAG
GGGGGCGGACCGGAGGGCGGGGAAAATGAGCAAAGAGGGGGGAAGATAAG
AGCGGTGGCGGTCGATGAAGCAGCCATTCAGTGGGTGAACCACATCATCA
ATGAAGAGCAACGACGTGCTGTCTTAGACATCGTCAATCAAACGCAAGGC
AGCCTCCCTTACATCCTCTACGGCCCTCCCGGCACAGGCAAGACGCTGAC
GGTAATTGAAGCAATTCTGCAGATATGTCGGCACCATCCGCGGTCTAAGG
TGTTGGCAGTGGCGCCCTCGGACGTGGCGGCCGATATTCTTGCGGAGCGA
TTGTCAGAGCACATGGAACCAAAGCAGCTCTTCCGCTTAAATTGGTGTCA
GGTGAGTTGGACCAGGGAAATGATCAAATGAAAGAAAAAATGGTAAAATT
GATACCGATGAGCAGTTCGTTGCGTGTGAAAAGTCAAAGAGGATGCGTGG
AAACCAAGTGGTTATCAAGTACTGTTGTTGTTAGCGCAGAGCACCCGGTC
TTCAGCAAGTAGACAGCACCACTCCTTCTTTCGCATGTGCCATGCTCATG
TGACTCCTTTCCCTACTTTCAATTAGCGCTTGATGGCTTCGATGAAGCCT
TCTCTGCTCAGATATTCATGTTGGGACGCCAAGGTTTCCCTGTTCTCCCT
TCCGGACGACGAACCTCGCTCGATTCTCGAACATCAGGTCATCGTCTCAA
CCTGCGCCAGCAGCGGGCTCCTGTCTCTCCTCGATATTTCGGGGCAAATA
CCTGTCAGTTTCTCTCACATTCTTGTGGACGAAGCCTCCCAAGCCCTCCA
GCCCGAGGTGATGGTCCCGCTCTCTCTGGCTGGTCCTGACACTGGAGTAG
TCTTGGCAGGTGACCCCAAGCAGTTGGGGGCCGTCACGAGGAATCCGCTA
GTGCAAGAACTGGGCTTGGCCCGAAGCCTGCAAGAACGTCTGATGGAAAC
ATGCTCAATCTACCGTACACAATTAGCTGCCGAAGCGACCGCAACAGAAG
GGAAGGTAGAGCATCCTAAGGGCAGTGAGCATCGGACCAGTGCACCGAAG
GAGGGCGACCCTGGCCGCTGCTTGACGATGCTGCGCAAAAATTATCGAAG
CCACCAGGCTATCATCGAGGTACCCTCTCGCATGTTCTACGACCGAACGC
TCGAGCAGCACGGGGACAAGAGCGTCATCGACTCGATGCTTGCTTGGGAA
ATGTTGCCAGGCTCCTCGTCTGCCACCATCCTAGATACGGCGCCACTGCG
GTCGACTGCGCGTGCTCAGGCGGGCCCAAAGGGGTTCCCGATCTTGTTTT
GGGGCTGTTTGGGAGAGCACATGCATGAGTTAGACTCGCCTTCTTTCTTC
AATGTGGTGGAATGCGGCAAAGTGCTGGATCTGGTTCATGCCCTGCTAAG
CAGTACCCGCGTACAAGTCCGAATGCAGGATATCGCCATTATCAGTGCCT
TCCGCAAGCAAGTTCTCAAACTTCGGTCTCTGCTGCGTGAAAAGGGGTAT
GGTGCCATCAATATCGGGCAAGTGGAAGATTTTCAAGGGCAAGAAACCAA
AGTAGTCATCATCTCCACAGTCTTGTCAGCCCGGCACCCAAACGAAATTT
CTGAGCAGCTTGGTTTCCTGGGTCATCCAAAACGCTTCAATGTCGCGATC
ACGCGAGCACAGGCTCTGACCGTAATAGTGGGCAATCCGTACGCTTTGTG
GGAGGACGTGGGAGGGTGGCGGCAGCTATTGGAATTTTGCAAGGAGCATG
GTGCCTTGCGCGGAAGTTCAGGCCCCCTGGGCACTCCGGACGTGGAGTCG
GTGGAGAGCTTGTTGGATACTATCGCGAACGAGTCCCTCCTCGGAAAAGC
GAGCAGTCATGACATTTTTCCGACGAGCCTGGAAGACTACTTCTCTGACA
GTCCCTGGCGGTTGCTATTGTGAGACGGCAACGGACGCGCGCCCATCAAG
TACGCCCCCAACGAGCGGCGAATTGCCACAAGAAAAGATGGAGACTGTGC
AGGGTGGTGATTGGTAGGAGTGTGAAGTGTAGAGTTTGTATACAGATGGC
GGCACTGAAATTATTCCGGTGGGTAGAGGATGCGCATAGACAAAGCCTAG
CAAAGCAGCTTTGACGACAAGAGGAAGCAACGTCTTAGGTGGAATCATTT
CATGTTAGGCCGCACAGAGGGAGCCTTAAGTGACCCTACTAACAATACAA
AGTCCGATTTTGTGCTGTGCACCTGCCAACGTGCCATTCCATCCAAGTAG
ACACACCTATGTTTGATTTGCCCCATGCTGGCCCCGTGTCTCGTCATGGA
CAAAATTCTATAGTCTCGCGTCCTATCTGGATGCCTTTCTGAGTATGCAG
TACATTCGAACAACTAAAATCGATTGC back to topCoding sequence (CDS) from alignment at CM002466.1:557700..562226- >rna5679 ID=rna5679|Name=rna5679|organism=Nannochloropsis gaditana|type=CDS|length=2412bp|location=Sequence derived from alignment at CM002466.1:557700..562226- (Nannochloropsis gaditana)
ATGTCTAAAGAAGCCCTATTTTTGGCCGGGGAAAGTTCAAGAATGGGGCA
TCCTCGTGGACGTAAAAGCAAGCAACGCAACGCGCCTGGATTAAATGGAG
CTCATCTGGAGATACATTCGCCTCTGCCTCAGTTAGACACTGTTATACCA
TTTCCAGTTTGCTCGCCCCCCGAAAGCTCTGTCGCGTTTTCTCCTCGAAA
GAACCCTTGGCAACCCTCGCCTCCTCATCATGAGAGACATCCCGCGCCCT
CACCGCCGAATTTTAGACATACATGGGTAACACCGACGCTTCCACATCAA
TCTCCATCTCCACGTTGTAACTGGATAGGACTGAATCCGATGTTCCTTCC
CGGATTTCCTGTCGTTCAACCCCAATCTCGTACTGCCCAGCCTCTGCCCG
GAGCCGGGCCTGAGATGCCGACGCCCATCTTTCTGACGCGGAGCTCCTGG
GAAAAAGGATTGGGCGATATAATTGCGTGCGAATCCTCCACGAGACATCT
GTCATCAAGCAAACACGGGGTACGCATTGAAGTGCCGGTTAAGGAAGGGC
TCCAGAAATGCGAGGTACTCGACATGACACGCGGCGGCGTGCAGGGACTG
GCGGAACGGCTTTCGTTGCATCCCCAGCAAGAATCGCACAGCCGAGCAGA
GACTTCCTGCATTTGGAAGAGTGACCCTTTGGCGGCGTTGGATCTCGGAG
TGGTGGCTACCAAGGCAAGGAGCGCTGCAGTTGAGGAGGAAGCCTTCCTT
CCTCGCGGCTATGAAGGTGCCCCTGCAGTCGTTCTGAATTTGCATGAAGA
CACAATGGACGAACCCGAGGAGAGCAGCGCGGGAACAGAAACGGAGCAGG
AATCCACTGCAGGTGGATACTCCCCGATGCATGCGAGTCGCCTGCTGCGC
ATTGTCAACGACTGCCCCGGTCCCTACGTGCTGCGGGAAGTCCTGATCTT
GCCCAAGGATGAGACCACGTCTGCGTGTTGGATCGAGGTGGAAGTAGGAG
GCTGGATATTTTCCAGCCAGAGTGGGCGCATGCCGTGGAAATGTTCATTA
AGGGAGATGTCCCCGTCCCGTGAGGAAAAGTTTTGGACGGGAGCCCCAGA
GATCCTGCTTTGTTTCGGCATTTCAGACGCACACGTCACGATCAAGGTGG
AGCCCGAATCGGAGAGTCGGATCGTCAAGAAGTGGGTGCTTTTCCGCATC
GAAACTCCCGGTATGGGCCCCGCGCACGACTTTCAGTACCACAGCTTCGT
GTTGGGACGGAAGGTCGTTGCCTCTGTCGCCGACAGAGCAGCCCAAGCCT
TGTTGAACGTGGAGGCGCGAGCTTTCGTTCCTCAAGGACTTCGAAGATAC
TTTGACGAACCCTGTAACATGGTATCCCATCCGGATGAGCCCTCCCCCTT
CCAACCTGTGGGAATGGCGAATGTTTTGCGATACCTCCCTCACTACTTCC
TCCCCGATGACATCCGGCGGGCGTTCCTCGGCTTTAGGGCGGCCAAGTTA
AGTGAGCGTTCAGATCCCTACGCTCTGTTTGGCATCGTCAAATCTCCGAC
GACTGTGTTGGAATATTGCAGGAACATGCGGGCGATGCTCTACCTTGAAG
AGGCCCAGGCGGGGGAGGACGTCCGCAGGTACGACTTGTTCGGCGTGCCC
ATCACCTACCGCGAAAAATCGAAAGATAAACCGAACACACCGCTGGTGGC
GACCATAAGTGTGCCAGGGGCGGCTGAAAAGAGGCCTCCCCTTGCGTACG
GCGATTGTGTCCGTCTCCGTCCAAGCAGTCTCCCCGCGATCGGCTCAGGG
CGACGCGTCATGGTGGAGATGCGAGCAGTCGTGCTGGAGACGCGCGAGGA
AAAAGTCAAGATTTTACTCCCGCCAAAATTCCCAACGAGCATGTTTCCAT
CCGACTCTCGCTTCCACATACGCTTTACGTACGATCGATATGGATTTCGG
TTCCTGCACCGGGCACTATACGGTTTCAGCACGCCGGCCCCGGCCAGGAG
GATATTTCCGAATTTTTTCTTTCCGCCTGAGGGGGGCGGACCGGAGGGCG
GGGAAAATGAGCAAAGAGGGGGGAAGATAAGAGCGGTGGCGGTCGATGAA
GCAGCCATTCAGTGGGTGAACCACATCATCAATGAAGAGCAACGACGTGC
TGTCTTAGACATCGTCAATCAAACGCAAGGCAGCCTCCCTTACATCCTCT
ACGGCCCTCCCGGCACAGGCAAGACGCTGACGGTAATTGAAGCAATTCTG
CAGATATGTCGGCACCATCCGCGGTCTAAGGTGTTGGCAGTGGCGCCCTC
GGACGTGGCGGCCGATATTCTTGCGGAGCGATTGTCAGAGCACATGGAAC
CAAAGCAGCTCTTCCGCTTAAATTGGTGTCAGGTGAGTTGGACCAGGGAA
ATGATCAAATGA back to top
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