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Properties
| Property Name | Value |
|---|
| Product | chloroplast sedoheptulose- -bisphosphatase |
| Orig transcript id | gnl|cribi|Naga_100049g1.2086.mrna |
| Orig protein id | gnl|cribi|Naga_100049g1.2086 |
| Gene | SBP |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:526912..528822 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5665 ID=rna5665|Name=rna5665|organism=Nannochloropsis gaditana|type=mRNA|length=1033bp
GAAGAAAGAGCGAAAATGCCAGTTTACGTCCTTACCACGCGTAGTGTGGC
AACTAATCCATAAACACAGGTCACCATGGCTCCAATAGTGGTGAGAAGAC
GACATTTTTCTACCTGTACACTGGTGGTGTGCGCTTTGTTCGCATCTGGC
ACTGCGTTTGTCTTCCCTGTTGCCCCTTCCTCGTCCAGGCCTGTCTCCCA
CACAAAAATGGCCGCGAGTAAATCACCCTTATCGTTCGGAAATGTGGTTA
AATTTTGGGTGGGTTGTAGCCTACTACTAACAGGACACCCTTCTCTAGCG
AATGCGGTGCCCGATTCAGCGCATGTCGTGACAACGTCGACAATCCTTGG
TTCAAGCTCTGTTCCCTCTAGCAAGGGTGTCGAAGTTCTGAACGACTTTT
TGCGCGCTGTTAAAGCAGTAAAAGCGGAAATAACCAGTGACAAACCGACA
GACTTGAAATATGTGCAGAAAGCGTTCGATGTTGAGGCGGTCACGACGGC
AGTCGACGGCACTTTGGATGCGCAAATGACCGGGGCAGCCATGGACCAGG
TTTCTATCGTAGGGAAACGAAAAGTCATCGACAAAGTATTGCGACAGGTT
CTCTCCGACGTAATAACGGTGGAAGATATCCTTCGCGACATGGACCCGGC
CAAAACTGGATTATCACGCTTTAAGAAGGTTGGTAAGCCCTTGGGAAAGC
TTGAGAATGATCTGCAACGATTGACCTCAGCCCTGACATCGAACGGCGCG
GATGACACGGCAGGAGCTGCTGGACTGGAGAAACCTCTTTTTTCATTGTG
TCCGGATGGGTATTTACTCTGCAACCCTGAATAGGTCGTGGGTATGACAT
GTGTCCCGGCCAAAAAGCAAGCTTTAATTGATGTTTTCATTTTAGCAAAG
AAATAGGCAACTGCATATTAAGAAAAGATCCCCCCCTCGAAATGCGTCGA
GCAATTTTTCTCTTTAAAGCGCTGTGGACTTCTTATTTTGGCGGCGATTG
GATGCGCATTCACTTCATGGTTTGCAATGTTTC back to topprotein sequence of rna5665 >rna5665-protein ID=rna5665-protein|Name=rna5665|organism=Nannochloropsis gaditana|type=polypeptide|length=372bp
MKCSLLLALVAPTMAFIPMKPVVPMAKAQARVKGQTRMQADMPGLASAPG
QPTIESWLLDNSEKKLSKAVLGLFSACKEIAYKIRTASCDKMACFNEFGD
EQLAIDILANNVLFQNLKDSGVVATASSEETPTEDPMGGEGYSVAFDPLD
GSSIIDTNFAVGTIFGVWPGSRLTGITGRELAASGIAVYGPRTTITFAID
GVEGAHEFLLVDDFTARHGQWIKTNTFTSIGEGKLYAPGNLRATNDNPGY
DALHKYWLQNKYQLRYTGGMVPDVNQIMVKGKGVFVNPESPSAKAKLRLL
YEVAPIGYVIEKAGGASSYGAGSVLDLKVYKTEDRTQVAYGSKDEVKRFE
EMVGTKFATAHPDTAAKNAAHA back to topmRNA from alignment at CM002466.1:526912..528822+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5665 ID=rna5665|Name=rna5665|organism=Nannochloropsis gaditana|type=mRNA|length=1911bp|location=Sequence derived from alignment at CM002466.1:526912..528822+ (Nannochloropsis gaditana)
AATCAAGGCGATTCAAGCCACACATTTACATAGCGTGCGACCCCAAAGAC
ACTTGTCTGTGACTTTGTGGGCATTGACCAGTGTGTTTGATGTCAAACAG
GAAAGGGTGGATCGGGGTTGGACAGTGTCGGCATCGGCCGGGCATCTGGG
GGCTTGCCCCCCCTGGAGATCTTGGGCCACACGCACGTTGGTTTGCTTCA
TTCGTGCGGTGACGAAGGCAGGAGGATTGCTCAAGTAACCTGCGTTTCGA
GTTGTTGATGGTCTGGGTGCGACGACTGCCCATGTGTATCGGCGGTGGCC
TGGACTGCTATGAAGCAAGGACGTGGATGCTGGCTTGGGTCGCCCACGTC
GACCCCCACCCCGATCTAGTCTCACCGACCCCTCTCCGTGTAGACAGACC
CGCACATGCCCACCAAAGCCACAAACTCATACAAACGACAGCTATAACTG
ACATACATATCCGTCTTGTTCGTCCTGTCCGGACCTTCAAGATGGCTGTG
ATGTTTTCCGGCTTCTTCAGCTTTAGTCAacattctcttccccccctccc
ttcccttttcgtTCAAAACAGAACTCCCCTCCAATTTAAGACATTCCCAG
ACCATGAAGTGCTCATTACTTCTTGCCCTGGTGGCTCCGACCATGGCATT
CATCCCGATGAAGCCTGTTGTACCTATGGCAAAAGCCCAAGCTCGCGTGA
AAGGGCAAACGCGTATGCAGGCGGACATGCCCGGCCTTGCCTCCGCTCCT
GGCCAGCCCACCATCGAAAGCTGGTTGCTCGACAATTCCGAGAAGAAACT
ATGTAAGTAAAATTGGGAGAGAAAGGTCCATAATTTGCGTAGAGTTGTTT
CGATGCTTTTAAGAATCCTGACTGGCGTCCACTCGCACTCGGCATGATTC
GGTGCGGCATGATTCGGTGCTTACTTTCCCTACCGGCGGTTCTCTTCCTT
ATGTCGCTCGCTCAACAGCCAAGGCTGTCTTGGGCCTCTTCAGCGCTTGC
AAGGAGATCGCATACAAAATCCGCACCGCCTCTTGTGACAAAATGGCCTG
CTTCAACGAGTTTGGGGACGAGCAGCTCGCCATCGACATCCTGGCCAACA
ACGTCTTGTTCCAGAACTTGAAGGACTCCGGCGTGgtcgccacggcctcc
tccgagGAGACCCCGACTGAGGACCCGATGGGCGGCGAGGGCTACTCGGT
GGCCTTCGACCCTCTGGAcggctcctccatcatcgacaCGAACTTCGCGG
TGGGCACCATCTTCGGGGTCTGGCCCGGCTCCCGCCTGACCGGGATCACA
GGCCGAGAGCTGGCTGCCTCCGGGATCGCCGTGTATGGGCCACGTACGAC
CATCACCTTTGCCATTGACGGTGTGGAGGGCGCGCACGAGTTCTTGCTCG
TGGACGACTTCACGGCCCGCCACGGCCAGTGGATCAAGACCAACACCTTC
ACGAGCATCGGCGAAGGGAAGCTGTACGCCCCGGGCAACCTGCGCGCGAC
CAACGACAACCCCGGCTACGATGCTCTGCACAAGTACTGGCTACAGAACA
AATACCAGCTCCGGTACACGGGCGGCATGGTGCCGGACGTGAACCAGATC
ATGGTCAAGGGCAAGGGTGTCTTCGTCAACCCCGAGTCCCCTtccgccaa
ggccaagctccgcctcctctacgAGGTGGCGCCCATTGGGTACGTGATCG
AGAAGGCCGGCGGTGCGTCCTCGTACGGGGCCGGCTCTGTCCTCGACCTG
AAGGTGTACAAGACCGAGGACCGCACTCAAGTCGCGTACGGGAGCAAGGA
CGAGGTCAAGCGTTTCGAAGAGATGGTGGGAACCAAGTTTGCCACTGCCC
ACCCGGACACTGCCGCCAAGAATGCCGCGCATGCCTAGACAGACAGtggg
agatgagggag back to topCoding sequence (CDS) from alignment at CM002466.1:526912..528822+ >rna5665 ID=rna5665|Name=rna5665|organism=Nannochloropsis gaditana|type=CDS|length=2238bp|location=Sequence derived from alignment at CM002466.1:526912..528822+ (Nannochloropsis gaditana)
ATGAAGTGCTCATTACTTCTTGCCCTGGTGGCTCCGACCATGGCATTCAT
CCCGATGAAGCCTGTTGTACCTATGGCAAAAGCCCAAGCTCGCGTGAAAG
GGCAAACGCGTATGCAGGCGGACATGCCCGGCCTTGCCTCCGCTCCTGGC
CAGCCCACCATCGAAAGCTGGTTGCTCGACAATTCCGAGAAGAAACTATC
CAAGGCTGTCTTGGGCCTCTTCAGCGCTTGCAAGGAGATCGCATACAAAA
TCCGCACCGCCTCTTGTGACAAAATGGCCTGCTTCAACGAGTTTGGGGAC
GAGCAGCTCGCCATCGACATCCTGGCCAACAACGTCTTGTTCCAGAACTT
GAAGGACTCCGGCGTGgtcgccacggcctcctccgagGAGACCCCGACTG
AGGACCCGATGGGCGGCGAGGGCTACTCGGTGGCCTTCGACCCTCTGGAc
ggctcctccatcatcgacaCGAACTTCGCGGTGGGCACCATCTTCGGGGT
CTGGCCCGGCTCCCGCCTGACCGGGATCACAGGCCGAGAGCTGGCTGCCT
CCGGGATCGCCGTGTATGGGCCACGTACGACCATCACCTTTGCCATTGAC
GGTGTGGAGGGCGCGCACGAGTTCTTGCTCGTGGACGACTTCACGGCCCG
CCACGGCCAGTGGATCAAGACCAACACCTTCACGAGCATCGGCGAAGGGA
AGCTGTACGCCCCGGGCAACCTGCGCGCGACCAACGACAACCCCGGCTAC
GATGCTCTGCACAAGTACTGGCTACAGAACAAATACCAGCTCCGGTACAC
GGGCGGCATGGTGCCGGACGTGAACCAGATCATGGTCAAGGGCAAGGGTG
TCTTCGTCAACCCCGAGTCCCCTtccgccaaggccaagctccgcctcctc
tacgAGGTGGCGCCCATTGGGTACGTGATCGAGAAGGCCGGCGGTGCGTC
CTCGTACGGGGCCGGCTCTGTCCTCGACCTGAAGGTGTACAAGACCGAGG
ACCGCACTCAAGTCGCGTACGGGAGCAAGGACGAGGTCAAGCGTTTCGAA
GAGATGGTGGGAACCAAGTTTGCCACTGCCCACCCGGACACTGCCGCCAA
GAATGCCGCGCATGCCTAGATGAAGTGCTCATTACTTCTTGCCCTGGTGG
CTCCGACCATGGCATTCATCCCGATGAAGCCTGTTGTACCTATGGCAAAA
GCCCAAGCTCGCGTGAAAGGGCAAACGCGTATGCAGGCGGACATGCCCGG
CCTTGCCTCCGCTCCTGGCCAGCCCACCATCGAAAGCTGGTTGCTCGACA
ATTCCGAGAAGAAACTATCCAAGGCTGTCTTGGGCCTCTTCAGCGCTTGC
AAGGAGATCGCATACAAAATCCGCACCGCCTCTTGTGACAAAATGGCCTG
CTTCAACGAGTTTGGGGACGAGCAGCTCGCCATCGACATCCTGGCCAACA
ACGTCTTGTTCCAGAACTTGAAGGACTCCGGCGTGgtcgccacggcctcc
tccgagGAGACCCCGACTGAGGACCCGATGGGCGGCGAGGGCTACTCGGT
GGCCTTCGACCCTCTGGAcggctcctccatcatcgacaCGAACTTCGCGG
TGGGCACCATCTTCGGGGTCTGGCCCGGCTCCCGCCTGACCGGGATCACA
GGCCGAGAGCTGGCTGCCTCCGGGATCGCCGTGTATGGGCCACGTACGAC
CATCACCTTTGCCATTGACGGTGTGGAGGGCGCGCACGAGTTCTTGCTCG
TGGACGACTTCACGGCCCGCCACGGCCAGTGGATCAAGACCAACACCTTC
ACGAGCATCGGCGAAGGGAAGCTGTACGCCCCGGGCAACCTGCGCGCGAC
CAACGACAACCCCGGCTACGATGCTCTGCACAAGTACTGGCTACAGAACA
AATACCAGCTCCGGTACACGGGCGGCATGGTGCCGGACGTGAACCAGATC
ATGGTCAAGGGCAAGGGTGTCTTCGTCAACCCCGAGTCCCCTtccgccaa
ggccaagctccgcctcctctacgAGGTGGCGCCCATTGGGTACGTGATCG
AGAAGGCCGGCGGTGCGTCCTCGTACGGGGCCGGCTCTGTCCTCGACCTG
AAGGTGTACAAGACCGAGGACCGCACTCAAGTCGCGTACGGGAGCAAGGA
CGAGGTCAAGCGTTTCGAAGAGATGGTGGGAACCAAGTTTGCCACTGCCC
ACCCGGACACTGCCGCCAAGAATGCCGCGCATGCCTAG back to top
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