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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100049g3.2114.mrna |
| Orig protein id | gnl|cribi|Naga_100049g3.2114 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:525774..526806 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5664 ID=rna5664|Name=rna5664|organism=Nannochloropsis gaditana|type=mRNA|length=4722bp
ATGTACTCCTCCCTCGAACAAGTTTTGAATCCACAAATCCATGATGATGA
TTGCCATGAGGTGGTCGTAAGTGACGAGGAGACTCAGACGCAATTTTGCT
TCGAATGCGCAATGGACTGCTTCAAGTCACCGAACCTCCTCACGATTCAA
AAGCGACGCCTTTTGATAGGCATGAGTGCTGGGTTTACGCAATTGGACCG
CATTGACGAGGCTCAAGGGACTGAAACAGATCGAGACGAACACGGGAATA
GCGTCGACGAGCTTTCAAACTCACAGAAGCAGGCTACGATCGAACTCCCG
TGCAAGGTAGTAGGAGATCGCATCATTCGATCCTATTTTGAACACGTTGT
TCTTCGGTGTATGAACCCCATAGACGACGTTGACGTAATACCAATTCTTT
TGAAGACAACGATGCAACTCTTTGCTCACGCGACCTTGGATGAGCAAACC
GTAATGGCGTTGTACGAACAGTTGCTGCACACGTGTCGCGCCAACGGAAT
CCGCGAGAGCCTGCACATTATTCAGCTCCTTTCCACCATGCTCGAAAACG
CCGATAATAATGGCCCCATTCTTCATTTCGATCACCTACTTGAAAACATC
GAAGGAGAAGATATTTGGCACCATAATAACGGAACCAACGGACATCCATC
GCTCTCCTTCGCTACCTCTTTGGTGGCTTTTGTCGATCTTGTGGCAGGCG
ATTGTTTCCGGGATTTGTGTGGGGCAAGCAAAGATGGGAAAGAAAGATTT
GCATGCAATGAGAGTGGTGGGAGGGAGAGACAAGTTCAGCTTCTGCGCCT
CCTCCTCCTCCTTGTCCGAGGCCCGCGGACGAAGGCCCTCCTACTTAGGG
AGGGCGTCATGTCGCGGCACATGAATCGCATTCAAAGCCTCTCAAACCTA
GGGCAGGGATCTCTAGGAGCTGCAACGCTGATAAGAAGCGTGGAGGGTGC
GTGGATAAAAGCTATTCTGGCCTTATCTGTTGTCCTCATACCTTCGCCGG
ATCCAGGGCCATTCACCGACATTACCCTTGACACAACAAAATTGAAAACA
CGGAAACGGTGGTTATCGCAGAGAAATCTAGAACCTCTGGGGCGAGTAGC
AAAAAGTAAAGAAACTACAGCAGGGCTTCTGCCCTGGCATACGACGTTGG
CATCAACGCTGGCAAAAGATTTAATCATCAGTGCAGATTTGGAAGTGGCA
TTCGGAGCCGGGTCCTACCTCCTCCTCTTGCTCTCCTGTCTCCTTCACGG
TCCTGATAAAAGGGGGAACGAGCTGGCTGAGGAGTTGATACGAATTGGTC
TCGTCGAATTTTGCTTGGAGGGTATCCGAAACGTTTTGAGGTTTGCTGTA
AGCAACGGGCATCAGACGCAGCAGCAACGAAATCAGGAGCAAGGAGATAA
AATTACCCTTCTGCTGTGTCGCTTGATGTGGACACTGAGCCGTGCTCAAC
CTTTAGGATTTTACGGATCGCAGCGCTTTTCTCCGTCCTTGTTCAAGGAA
CTGGTTGAATTGTTGCAAGGCTTAGCGGAGAACGAAAGTTTGGCTCGCGT
CAGTCGCCTATCTTTGGAAATGGAGGATCCGCATGAGCTGGTTAGCTACG
AGGAAACGGAAAGTAAGGACTGGCTTGTAATGGATGCAAGCGCGCCGAAT
CTAGTCTTGAGTATCATTCACGCCAGTTTGACGCAGACACGTGTGATATA
TGACGAAGATTTGATGGGCAGATTGCTGCAGGTGCTTAGGCACTGCCAAA
ATAAGGATAATGAGGAGCACCCATTGAATTCGCAGCAAGATCCTACGAGC
AGCTTCTCGTCTACCTTCCCACTCCAGCTTTTACTCTTTTTATCGGAATA
TCTAGGGGCGATAAGCAACAAGCTTCTCTTCCCTTCTCATCCCATTCTGG
AAAGTTTTCTTCATTGCTTGAAAACCCAAATCATTTTTTTTCTCTGCTTC
CCTATATGCCTCCCATCCTATTCAAAAGCGGGGCCAACGTTTATGTTGAC
TTTGGCTCTGGCAAATCTACGTGTACTGGACATCCTTTCTGTCCGGCATT
ATCACCATCATCAGCCGCGGCTTCCTCCGTCGCAACCTAATCTTCTTTCC
CTCCTGCTGGACGCAGCGATGCAGCTTCTTGTGCTCTTTTCGGGCACAGA
GAGGCGAAGTCCAGGAGATGAATACGCGATTTGTCATTTGTACTCAAAGC
TTCTGCTGTTAATGTCAGATGCTGAAGAGAAATGTTGCACCACTGAATGC
ATGGGCAATGACATAGACCGAGACAGCCACAGGTTGAGTCAACTCTTGCT
GGATACAGGGGTGTTTGAAATGGCTATTCAACACATCAGTTATTTGGAAG
AAGGGGAGAACGTTGAAGAGAAAAACGTGGATGTATTCAGTCAAATAGCC
GCAAGGCTTTTGACAGACGTCTCCGACAAGTCCGAGGGATTGGATCCATG
TCATCTTACTCGCTTCGTAAGGCAAAACCTCAGGACCTTGCATTTTGCCA
CCCTCTCTGATGAAGTAGCAGAGATTTGGCTGTGGTTGTTGGCGCAAGAT
CTGCATTGTCTCTGTCGCTGGGAAGCAGAATACTTAGTAAATGGTTGCTC
GCGTTTCGAGCTGCTTCTACTCATATCCCGACGCGTGTGGCGAAAACGTA
GACCTCACGTTATAGTTCCGGGGGAGGAGATAAGCAAATTGCTTATAAGC
TGGGGAAAACAAGCACAGCAAGCAAGGGAAGAGGCCTATCTAGGGCGAAT
TCTGACTCCTCTTTCCATTAAGTTAATTCTTGATTTGGCCCTTGGAGGTA
GTAGCGTTCCTCGTCTCGCTCCAGAAGTGCGTGCTGGTTTGCAGACCGTT
CTACAAGCCTTTTGCGTGAGAGAAAACAAGGGAGTAGATACATTTTGTTC
TATCTATTTGTCATGCCACGGTCCATCCCATCTACACTCCTGCCTCGCTC
TTGCCGATGCTACGGGAGTGCAATTCATCGTTCACCGTTGGATGGACCAA
CTGGTCGAGGATAAATTGAACGTCGAGATATCAGAGGGAAGCAATGGGCC
CTCACTGTTTGCGCGAGTCTTACATACGTATTTCAACACGGGCGCGGGGG
ATGGTCGCAGCGTGCTTTTGGCCCTTTTACAGTACATGAAAGCCGCCTCC
TCGCATCGTCCGACGCCGCGTCTTGCCCAAGCTTTGACCTATCTTTACAC
TGCATCCTGTTGGTCTCAATTGTGGGCATCATGCGCGGACACGTGCAGTG
AAACATTGCAAATCTTGCACGACATGATTTTGCCCGTCCTAGTAGACGGC
TCAAGCATTTTAGAGGGCCAGACCGCGCTACGCCTCACAAATGTAACGAA
GGAGGAAAATCAGATCATGCCTGACGTGCAGACTTTAGCCGTGCAAGTCA
TTCAAATTGTCAAAGCCGCACTGCAACATGCTGCATGGTCCGCTGATTTT
ACACCTGTCTTGAAGACAACCAGCCGCATTCTCCTTCTTGCTACTGCCCC
CCCCTTGAAAAACCCGCACGTCGGAGCCGCGCTGCTCGCTTTAATCAACG
ATATTACTAGGCGAGGACACGATGAGTTTTTGAACCAGTGCGCAGGCATT
TTGGATCTTGCTTGGTCTTTTGAGAGCGCATCTCCGCGTCTCGCAACAAC
AAATGCACTTCTATATTGTCTACTGCTTCTTCACCACCGCTGCACGCGCA
CGCAAGCTCAACTCCAAGGCTTGCGGGGCGAGCATCAGACCAACGTGCAA
GTTAGGGCCGATGCAGACAGTTTCAAACCTTCTTGGCTGTCTCATGCATT
CTTTCGCATTGATTTTCTCGAAACATGTATCCAGCCGGACAATGATGATG
AGCCCACACAGGAAAGAAGAAGAGTTGCTCTGGCATTGCTTTGTTTGATG
ATGACTCGTGAAAATCGTACCTTCCCCACGCTGAGTCCGAGTAAATTGCA
GGGAGAAAAATGGGAAGTAAGCAAGGATAGCGCTTTCCGCAAAGGCTCCA
CAAAGTTTCGAAAAATGCGTCTAAATGTACAGGCCTGCTTACTGGACTCC
GATGCACGTGTGCGGGAGTGTGCCATGGCATTGCTTCTCCAACTCTGGGA
CTATGCTTCTCCTACAGCTTGGGATATATTTCTCTTGCAATCTCCTCCTG
TCATCTCTTCTCTTGCTTCTGGCACTTCCTCGTATGCACCCCTTTTCGTC
GCTGCCTGTCTTCTAAGTGGAGAAACAAGCATTCACAACGTAATCTGTAA
TCCTTTGGGAAACGAGACATTTCTTGTAGACCATCTTGTTGCTCGAGTGC
AAGCGGTAATCCACGGCGTACGTGCAGGAGAACGCGACTCTTTGCCCGCG
TACTACCCCTCACTGCTCTATTTTTTCCAAGCACTGACCCTAACCGGCCA
CATAAAACATGAGCAGCAATTGACCTTACAGCGCATTCTCAAACCATCAT
CACTAAAAAATGATGGACGGAGTGGAAACAAGAGCGACACTCAGTGGATG
TTGGCTGTAGATGATGCCCGCCTGGTGGACTACGACGAAAGTGCGTGCCA
AGAGCAAGATTTGGTTGATGTTGTCAAATACATGGATTACAGTGATCCTC
ATGATAGGTTGCGGATAACAACGACAGAGGGTCTGCGGTGTGGATCTACA
TGCGCGTATCCGACGCATCCTCGCGAGGTAGACCTTAAAAAAGTGGTAGA
AACATTGCAAACCATGAAGTGA back to topprotein sequence of rna5664 >rna5664-protein ID=rna5664-protein|Name=rna5664|organism=Nannochloropsis gaditana|type=polypeptide|length=252bp
MAPIVVRRRHFSTCTLVVCALFASGTAFVFPVAPSSSRPVSHTKMAASKS
PLSFGNVVKFWVGCSLLLTGHPSLANAVPDSAHVVTTSTILGSSSVPSSK
GVEVLNDFLRAVKAVKAEITSDKPTDLKYVQKAFDVEAVTTAVDGTLDAQ
MTGAAMDQVSIVGKRKVIDKVLRQVLSDVITVEDILRDMDPAKTGLSRFK
KVGKPLGKLENDLQRLTSALTSNGADDTAGAAGLEKPLFSLCPDGYLLCN
PE back to topmRNA from alignment at CM002466.1:525774..526806- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5664 ID=rna5664|Name=rna5664|organism=Nannochloropsis gaditana|type=mRNA|length=1033bp|location=Sequence derived from alignment at CM002466.1:525774..526806- (Nannochloropsis gaditana)
GAAGAAAGAGCGAAAATGCCAGTTTACGTCCTTACCACGCGTAGTGTGGC
AACTAATCCATAAACACAGGTCACCATGGCTCCAATAGTGGTGAGAAGAC
GACATTTTTCTACCTGTACACTGGTGGTGTGCGCTTTGTTCGCATCTGGC
ACTGCGTTTGTCTTCCCTGTTGCCCCTTCCTCGTCCAGGCCTGTCTCCCA
CACAAAAATGGCCGCGAGTAAATCACCCTTATCGTTCGGAAATGTGGTTA
AATTTTGGGTGGGTTGTAGCCTACTACTAACAGGACACCCTTCTCTAGCG
AATGCGGTGCCCGATTCAGCGCATGTCGTGACAACGTCGACAATCCTTGG
TTCAAGCTCTGTTCCCTCTAGCAAGGGTGTCGAAGTTCTGAACGACTTTT
TGCGCGCTGTTAAAGCAGTAAAAGCGGAAATAACCAGTGACAAACCGACA
GACTTGAAATATGTGCAGAAAGCGTTCGATGTTGAGGCGGTCACGACGGC
AGTCGACGGCACTTTGGATGCGCAAATGACCGGGGCAGCCATGGACCAGG
TTTCTATCGTAGGGAAACGAAAAGTCATCGACAAAGTATTGCGACAGGTT
CTCTCCGACGTAATAACGGTGGAAGATATCCTTCGCGACATGGACCCGGC
CAAAACTGGATTATCACGCTTTAAGAAGGTTGGTAAGCCCTTGGGAAAGC
TTGAGAATGATCTGCAACGATTGACCTCAGCCCTGACATCGAACGGCGCG
GATGACACGGCAGGAGCTGCTGGACTGGAGAAACCTCTTTTTTCATTGTG
TCCGGATGGGTATTTACTCTGCAACCCTGAATAGGTCGTGGGTATGACAT
GTGTCCCGGCCAAAAAGCAAGCTTTAATTGATGTTTTCATTTTAGCAAAG
AAATAGGCAACTGCATATTAAGAAAAGATCCCCCCCTCGAAATGCGTCGA
GCAATTTTTCTCTTTAAAGCGCTGTGGACTTCTTATTTTGGCGGCGATTG
GATGCGCATTCACTTCATGGTTTGCAATGTTTC back to topCoding sequence (CDS) from alignment at CM002466.1:525774..526806- >rna5664 ID=rna5664|Name=rna5664|organism=Nannochloropsis gaditana|type=CDS|length=759bp|location=Sequence derived from alignment at CM002466.1:525774..526806- (Nannochloropsis gaditana)
ATGGCTCCAATAGTGGTGAGAAGACGACATTTTTCTACCTGTACACTGGT
GGTGTGCGCTTTGTTCGCATCTGGCACTGCGTTTGTCTTCCCTGTTGCCC
CTTCCTCGTCCAGGCCTGTCTCCCACACAAAAATGGCCGCGAGTAAATCA
CCCTTATCGTTCGGAAATGTGGTTAAATTTTGGGTGGGTTGTAGCCTACT
ACTAACAGGACACCCTTCTCTAGCGAATGCGGTGCCCGATTCAGCGCATG
TCGTGACAACGTCGACAATCCTTGGTTCAAGCTCTGTTCCCTCTAGCAAG
GGTGTCGAAGTTCTGAACGACTTTTTGCGCGCTGTTAAAGCAGTAAAAGC
GGAAATAACCAGTGACAAACCGACAGACTTGAAATATGTGCAGAAAGCGT
TCGATGTTGAGGCGGTCACGACGGCAGTCGACGGCACTTTGGATGCGCAA
ATGACCGGGGCAGCCATGGACCAGGTTTCTATCGTAGGGAAACGAAAAGT
CATCGACAAAGTATTGCGACAGGTTCTCTCCGACGTAATAACGGTGGAAG
ATATCCTTCGCGACATGGACCCGGCCAAAACTGGATTATCACGCTTTAAG
AAGGTTGGTAAGCCCTTGGGAAAGCTTGAGAATGATCTGCAACGATTGAC
CTCAGCCCTGACATCGAACGGCGCGGATGACACGGCAGGAGCTGCTGGAC
TGGAGAAACCTCTTTTTTCATTGTGTCCGGATGGGTATTTACTCTGCAAC
CCTGAATAG back to top
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