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Properties
| Property Name | Value |
|---|
| Product | fructose- -bisphosphate |
| Orig transcript id | gnl|cribi|Naga_100049g16.2116.mrna |
| Orig protein id | gnl|cribi|Naga_100049g16.2116 |
| Gene | FBA1 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:490350..493563 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5650 ID=rna5650|Name=rna5650|organism=Nannochloropsis gaditana|type=mRNA|length=1083bp
ATGTCCTCTTTGGCAGCCGCGCAAGCCGATGGTTACTACCGTCCACCTGA
CTGGGATGGAAAATCCTCTTTGAAAAAAATCACGGGGTCTAAAGGGCACA
ACCAATACACGCAAAGTGGAATTATCCGCTTCGAGCTACCGTACAACAGC
TGGTGCTTAAAATGTGATCGTCACATTGGTAAAGGTGTGCGCTTTAACGC
CAAGAAAATTCAGGCGGGGAATTACTTCTCCACAAAAATATGGGAGTTTC
ACATGAAATGTGCCTCATGCAAAAACCGCTTGGTGATCAGGACGGACCCG
AAAAATTGCGACTACGAGTTTGTGGAGGGCATTCGACGCCGCGAGCAAGA
ATACGACCCGGAAGCCATCGGTTTGCCTGTCTTGTCAGCCGAACCCACGG
GAGCGAGTGACTTGGCAGGAGCTGCCACTACTCCTTCCTCTGCCAACGCC
CCGAACGGGGGTGTCTCGGCCGACCCCCTGGCCGCCTTGGAGCGGGGTAA
GGACCAGATACGACGGACGAACGCCGCGGCGGCCCGCTTGCAGGAGCTCA
TGGAGGCCTCGGACCGCCTCGAAGCCGATTCAAGTGGGGTCAACCGGCTG
CTACGCAACAAGTTTCGGGCGGAGAAAAAGGTTTTGGAAGACTTGGACCG
GGAAAGTGCCGAAAAGGGCCTCCGCTTCCGACTCCTCCCCCCCAGCGCGG
AAGACGCTCGCATGGCCCCGATGGCCTTGCTGGAGGGAGGCACCGGGGGT
CTGACAAGGGCACGTCGAGAAGGTTTCCACAAAGCAGCCAGGACCAAGCT
CACCAGTATTATGAGTTCCTCCATTTTTGACGATCCAGGGGCAGGAAGAA
GATCATCCTCAGGCTCCTCGGCTTTGGTGGTGGGCAGCAAGAGAGGGGAC
CCGACGAAGCGGAGCAAAGCAGTCTTGAATGCGGAAACTCAAAAGGACCT
GGCAGTGAAGCGGGCTAGATTAGGAATTGATTCTTCCCATTTCAAAGCAT
CCCAGGCAGCCAATGCCTCGACGTCAGCCCTTCTCATGGTGCCGTTCGCG
CCTACCCGGAGGAAAGAAAGGCGAAAGAGCTGA back to topprotein sequence of rna5650 >rna5650-protein ID=rna5650-protein|Name=rna5650|organism=Nannochloropsis gaditana|type=polypeptide|length=437bp
MSTASPSSAPQAPASSHGLEAYHLHLMEAAKLAAQLTQHQKNALETIANQ
MARPGRGLLAADESVPTLGKRLVAAGLVNDEETRRAYREVLFSHPDLGEY
LSGAILFSETLGQKAVKDAEGRLFPALLQSKGVLPGVKVDLGLEPLEYSA
RETHTKGMNDLMERCQEFYAQGARFAKWRAVIRIDEAANLPTRACMQINS
AELARYAATCQACGLVPIVEPEILIEGAHSAETFARVTEAALSEVYYTLA
QAKVFLEGTLLKPQMIMPGVDSPSEGRPRPEEAARRTLEALRRRVPPAVP
GVVFLSGGQTEEQATQNLNLINQLAKRPASPFRPSSTTCPWILSFSFGRS
LQASVLATWDGKDKNYEKAMEVAGALAKANAQAQLGEYQGPHPSVLKGQS
LHETNRGWGANAGEGGGKGESTAGATATVPPSGETAA back to topmRNA from alignment at CM002466.1:490350..493563+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5650 ID=rna5650|Name=rna5650|organism=Nannochloropsis gaditana|type=mRNA|length=3214bp|location=Sequence derived from alignment at CM002466.1:490350..493563+ (Nannochloropsis gaditana)
GGGGCGttggcagaggaaggagtaGTGGCAGCTCCTGCCAAGTCACTCGC
TCCCGTGGGTTCGGCTGACAAGACAGGCAAACCGATGGCTTCCGGGTCGT
ATTCTTGCTCGCGGCGTCGAATGCCCTCCACAAACTCGTAGTCGCAATTT
TTCGGGTCCGTCCTGATCACCAAGCGGTTTTTGCATGAGGCACATTTCAT
GTGAAACTCCCATATTTTTGTGGAGAAGTAATTCCCCGCCTGTGTGTGGa
ttgaagggggggggcgagccCAGCAGCTTACAATAAGTACATGCGACTGG
AAATATAAAGACTTGTCGCACCTTACCTGAATTTTCTTGGCGTTAAAGCG
CACACCTTTACCAATGTGACGATCACATTTTAAGCACCAGCTGTTGTACG
GTAGCTCGAAGCGGATAATTCCACTTTGCGTGTATTGGTTGTGCCCTGCA
TGCGGGAGGAGTTAGCGGTAATCGAGTGCCCCAGGAAGCCTTCTTCCATG
TTACACGCACCTTTAGACCCCGTGATTTTTTTCAAAGAGGATTTTCCATC
CCAGTCAGGTGGACGGTAGTAACCATCGGCTTGCGCGGCTGCCAAAGAGG
ACATGCTCTCTGGCGCCTAAGAATGTTATCAGCCGACAGACGACAACGGG
CTCAGGACCCTGAGACCAATCGGGGCCAGGATGGTCGACCGTCGAACGAT
ACTCCGATGTCAGATATCTTCCAGCAGTCCTGTCTTGTGAGTCGTTTGTG
ATGCTGAAGATGAAGGCATGGTTCTAGGGTTTTTCTTGTCACTAACGGAT
TTCTTATCCCGTGCTCTGCTCGCTCATCTCTGATGAGATCAGGGATCAAA
ACACGCTAGCAACGTGTGTCTTCAAAAAAGAAGCGAGAATCACCAAAATT
CTTACGGCTACTAAACCCTTTAAGACTCGCTTACTTAATTCAGCATGTCT
CTCACGGTGCATTAACTTCCATGAAAGATCGACGCTAACAACCtactcca
cctcccccccttgcagCACCCGGGGCCCGACCATGTCGACAGCATCTCCC
TCAAGTGCCCCCCAAGCACCCGCGTCTTCACATGGACTCGAAGCGTATCA
CCTCCATTTGATGGAGGCCGCGAAGCTGGCTGCGCAATTGACGCAGCATC
AAAAAAATGCGCTCGAGACAATTGCGAATCAGATGGCACGGCCGGGGCGC
GGACTCCTAGCAGCCGACGAGAGCGTGCCCACGCTGGGGAAACGCCTGGT
AGCCGCCGGATTGGTGAATGATGAAGAAACGCGAAGGGCGTACCGGGAAG
TCCTGTTTTCTCATCCGGATCTGGGTGAGTATCTGAGCGGCGCAATCCTT
TTCTCGGAGACCCTCGGACAGAAGGCGGTaaaggacgcggagggccGCCT
GTTTCCCGCCTTGCTGCAAAGCAAAGGGGTTCTTCCCGGGGTGAAAGTAG
ACTTAGGCCTGGAACCGTTGGAGTACAGTGCTCGAGAGACGCATACCAAA
GGCATGAACGATTTAATGGAGCGATGTCAGGAATTTTACGCTCAAGGGGC
ACGCTTCGCCAAGTGGCGTGCTGTCATCCGGATCGACGAAGCAGCTAATC
TGCCGACCCGTGCATGCATGCAAATCAACAGCGCAGAGCTAGCTCGCTAC
GCGGCTACATGCCAGGCATGTGGTTTGGTGCCGATTGTGGAGCCCGAAAT
ATTGATAGAGGGGGCACATTCAGCTGAGACTTTTGCGCGGGTGACAGAGG
CGGCCTTGAGCGAGGTATACTACACGCTGGCGCAGGCCAAGGTTTTTCTG
GAAGGGTACGTAAACCAGCTTGTGAGGACACGCGAATATCCGCGTTGGCC
AGCCGCCTGGTCCCCCTATGGTCACTCTCCGTCGTTGGGGCGCCTCTGGA
ATCGCATTCAGTTCCGCGTGCAACACAGTAGGTGAATGTCTTCTtacccc
ccttccccaacGCCCAGAACCCTTCTGAAACCGCAGATGATCATGCCTGG
CGTGGACAGTCCCTCCGAGGGTCGGCCCCgcccggaggaggcagcgaggc
gcACGTTAGAGGCCCTACGGAGACGGGTGCCGCCTGCCGTGCCCGGGGTC
GTCTTTTTATCAGGTACACGACAAGGATTCATTTCCTTTCGAGTGTCTCT
TTGCGCGCATATTCGGGAGCGTGGAGGCTTCTCACACACTCTTACCACCC
TTCCTGTCCGGACTCTGCCCCCTCTTCTGGGCCTTTCCATATTGGCAACT
GCTCAGGCGGACAAACAGAAGAACAAGCCACGCAAAATCTCAACCTCATC
AACCAGCTCGCAAAACGTCCAGCTTCCCCCTTCCGGCCTTCCTCTACGAC
GTGCCCCTGgatcctgtccttctccttcggtCGCTCCTTACAGGCAAGTG
TATTGGCAACGTGGGACGGCAAGGACAAAAACTACGAGAAAGCGATGGAA
GTTGCCGGAGCGCTGGCAAAAGCGAATGCACAGGCCCAGCTAGGCGAGTA
TCAAGGGCCTCATCCCTCAGTGCTCAAGGGTCAGAGTTTGCACGAGACGA
ACCGCGGATGGGGCGCTAATGcaggggagggtggtgggaaaGGTGAGTCA
ACAGCGGGGGCCACGGCGACAGTTCCACCATCGGGAGAAACTGCGGCGTG
ACGTTCcatggcaggaggagatgaggggggggcagcccAGTAGACGGTGA
TAATTGGCAAGTAAATGAATGTCGTGTGTGGACTTCAGGCGTACACGACG
AGCTGTTAAGGAATGAAGTCGCGTGGATCTGGAGGACGCGTGTGGCCTGG
GATAAAATAGACCACCGGCATGCAATCTTGGGTGCATGAACTGAGTGATA
ATGCTTTCACAAAATTGAATGACagtgaagagaaggaagattgCATAGAT
AGCATTTTCGACGTCAGGCTCGTGCGTACAGGGAGGGATTTTCTTCGGCA
CACAGTCCTCTGCAATGCCCAGCCTTCCTGGTAGGGACGTGATACCATTC
AAATATCTCCCGCCATGTACCTGTCGCACAGGACGACCCAATGGCACACA
TTTCCAGTCCGAACATTTCTTCTTTGAGCGCTACTCAGACTTGTGTAATC
TATGAAATGCTTTTGCAGTCGTTTCTTAACTCTCAATCCGACACACACTC
GCTTTATGCATCCTCAAGAACATGTCACAGCGTTTCTCCGACACAAAAAT
TACTTCTTTCTAGA back to topCoding sequence (CDS) from alignment at CM002466.1:490350..493563+ >rna5650 ID=rna5650|Name=rna5650|organism=Nannochloropsis gaditana|type=CDS|length=3942bp|location=Sequence derived from alignment at CM002466.1:490350..493563+ (Nannochloropsis gaditana)
ATGTCGACAGCATCTCCCTCAAGTGCCCCCCAAGCACCCGCGTCTTCACA
TGGACTCGAAGCGTATCACCTCCATTTGATGGAGGCCGCGAAGCTGGCTG
CGCAATTGACGCAGCATCAAAAAAATGCGCTCGAGACAATTGCGAATCAG
ATGGCACGGCCGGGGCGCGGACTCCTAGCAGCCGACGAGAGCGTGCCCAC
GCTGGGGAAACGCCTGGTAGCCGCCGGATTGGTGAATGATGAAGAAACGC
GAAGGGCGTACCGGGAAGTCCTGTTTTCTCATCCGGATCTGGGTGAGTAT
CTGAGCGGCGCAATCCTTTTCTCGGAGACCCTCGGACAGAAGGCGGTaaa
ggacgcggagggccGCCTGTTTCCCGCCTTGCTGCAAAGCAAAGGGGTTC
TTCCCGGGGTGAAAGTAGACTTAGGCCTGGAACCGTTGGAGTACAGTGCT
CGAGAGACGCATACCAAAGGCATGAACGATTTAATGGAGCGATGTCAGGA
ATTTTACGCTCAAGGGGCACGCTTCGCCAAGTGGCGTGCTGTCATCCGGA
TCGACGAAGCAGCTAATCTGCCGACCCGTGCATGCATGCAAATCAACAGC
GCAGAGCTAGCTCGCTACGCGGCTACATGCCAGGCATGTGGTTTGGTGCC
GATTGTGGAGCCCGAAATATTGATAGAGGGGGCACATTCAGCTGAGACTT
TTGCGCGGGTGACAGAGGCGGCCTTGAGCGAGGTATACTACACGCTGGCG
CAGGCCAAGGTTTTTCTGGAAGGAACCCTTCTGAAACCGCAGATGATCAT
GCCTGGCGTGGACAGTCCCTCCGAGGGTCGGCCCCgcccggaggaggcag
cgaggcgcACGTTAGAGGCCCTACGGAGACGGGTGCCGCCTGCCGTGCCC
GGGGTCGTCTTTTTATCAGGCGGACAAACAGAAGAACAAGCCACGCAAAA
TCTCAACCTCATCAACCAGCTCGCAAAACGTCCAGCTTCCCCCTTCCGGC
CTTCCTCTACGACGTGCCCCTGgatcctgtccttctccttcggtCGCTCC
TTACAGGCAAGTGTATTGGCAACGTGGGACGGCAAGGACAAAAACTACGA
GAAAGCGATGGAAGTTGCCGGAGCGCTGGCAAAAGCGAATGCACAGGCCC
AGCTAGGCGAGTATCAAGGGCCTCATCCCTCAGTGCTCAAGGGTCAGAGT
TTGCACGAGACGAACCGCGGATGGGGCGCTAATGcaggggagggtggtgg
gaaaGGTGAGTCAACAGCGGGGGCCACGGCGACAGTTCCACCATCGGGAG
AAACTGCGGCGTGAATGTCGACAGCATCTCCCTCAAGTGCCCCCCAAGCA
CCCGCGTCTTCACATGGACTCGAAGCGTATCACCTCCATTTGATGGAGGC
CGCGAAGCTGGCTGCGCAATTGACGCAGCATCAAAAAAATGCGCTCGAGA
CAATTGCGAATCAGATGGCACGGCCGGGGCGCGGACTCCTAGCAGCCGAC
GAGAGCGTGCCCACGCTGGGGAAACGCCTGGTAGCCGCCGGATTGGTGAA
TGATGAAGAAACGCGAAGGGCGTACCGGGAAGTCCTGTTTTCTCATCCGG
ATCTGGGTGAGTATCTGAGCGGCGCAATCCTTTTCTCGGAGACCCTCGGA
CAGAAGGCGGTaaaggacgcggagggccGCCTGTTTCCCGCCTTGCTGCA
AAGCAAAGGGGTTCTTCCCGGGGTGAAAGTAGACTTAGGCCTGGAACCGT
TGGAGTACAGTGCTCGAGAGACGCATACCAAAGGCATGAACGATTTAATG
GAGCGATGTCAGGAATTTTACGCTCAAGGGGCACGCTTCGCCAAGTGGCG
TGCTGTCATCCGGATCGACGAAGCAGCTAATCTGCCGACCCGTGCATGCA
TGCAAATCAACAGCGCAGAGCTAGCTCGCTACGCGGCTACATGCCAGGCA
TGTGGTTTGGTGCCGATTGTGGAGCCCGAAATATTGATAGAGGGGGCACA
TTCAGCTGAGACTTTTGCGCGGGTGACAGAGGCGGCCTTGAGCGAGGTAT
ACTACACGCTGGCGCAGGCCAAGGTTTTTCTGGAAGGAACCCTTCTGAAA
CCGCAGATGATCATGCCTGGCGTGGACAGTCCCTCCGAGGGTCGGCCCCg
cccggaggaggcagcgaggcgcACGTTAGAGGCCCTACGGAGACGGGTGC
CGCCTGCCGTGCCCGGGGTCGTCTTTTTATCAGGCGGACAAACAGAAGAA
CAAGCCACGCAAAATCTCAACCTCATCAACCAGCTCGCAAAACGTCCAGC
TTCCCCCTTCCGGCCTTCCTCTACGACGTGCCCCTGgatcctgtccttct
ccttcggtCGCTCCTTACAGGCAAGTGTATTGGCAACGTGGGACGGCAAG
GACAAAAACTACGAGAAAGCGATGGAAGTTGCCGGAGCGCTGGCAAAAGC
GAATGCACAGGCCCAGCTAGGCGAGTATCAAGGGCCTCATCCCTCAGTGC
TCAAGGGTCAGAGTTTGCACGAGACGAACCGCGGATGGGGCGCTAATGca
ggggagggtggtgggaaaGGTGAGTCAACAGCGGGGGCCACGGCGACAGT
TCCACCATCGGGAGAAACTGCGGCGTGAATGTCGACAGCATCTCCCTCAA
GTGCCCCCCAAGCACCCGCGTCTTCACATGGACTCGAAGCGTATCACCTC
CATTTGATGGAGGCCGCGAAGCTGGCTGCGCAATTGACGCAGCATCAAAA
AAATGCGCTCGAGACAATTGCGAATCAGATGGCACGGCCGGGGCGCGGAC
TCCTAGCAGCCGACGAGAGCGTGCCCACGCTGGGGAAACGCCTGGTAGCC
GCCGGATTGGTGAATGATGAAGAAACGCGAAGGGCGTACCGGGAAGTCCT
GTTTTCTCATCCGGATCTGGGTGAGTATCTGAGCGGCGCAATCCTTTTCT
CGGAGACCCTCGGACAGAAGGCGGTaaaggacgcggagggccGCCTGTTT
CCCGCCTTGCTGCAAAGCAAAGGGGTTCTTCCCGGGGTGAAAGTAGACTT
AGGCCTGGAACCGTTGGAGTACAGTGCTCGAGAGACGCATACCAAAGGCA
TGAACGATTTAATGGAGCGATGTCAGGAATTTTACGCTCAAGGGGCACGC
TTCGCCAAGTGGCGTGCTGTCATCCGGATCGACGAAGCAGCTAATCTGCC
GACCCGTGCATGCATGCAAATCAACAGCGCAGAGCTAGCTCGCTACGCGG
CTACATGCCAGGCATGTGGTTTGGTGCCGATTGTGGAGCCCGAAATATTG
ATAGAGGGGGCACATTCAGCTGAGACTTTTGCGCGGGTGACAGAGGCGGC
CTTGAGCGAGGTATACTACACGCTGGCGCAGGCCAAGGTTTTTCTGGAAG
GAACCCTTCTGAAACCGCAGATGATCATGCCTGGCGTGGACAGTCCCTCC
GAGGGTCGGCCCCgcccggaggaggcagcgaggcgcACGTTAGAGGCCCT
ACGGAGACGGGTGCCGCCTGCCGTGCCCGGGGTCGTCTTTTTATCAGGCG
GACAAACAGAAGAACAAGCCACGCAAAATCTCAACCTCATCAACCAGCTC
GCAAAACGTCCAGCTTCCCCCTTCCGGCCTTCCTCTACGACGTGCCCCTG
gatcctgtccttctccttcggtCGCTCCTTACAGGCAAGTGTATTGGCAA
CGTGGGACGGCAAGGACAAAAACTACGAGAAAGCGATGGAAGTTGCCGGA
GCGCTGGCAAAAGCGAATGCACAGGCCCAGCTAGGCGAGTATCAAGGGCC
TCATCCCTCAGTGCTCAAGGGTCAGAGTTTGCACGAGACGAACCGCGGAT
GGGGCGCTAATGcaggggagggtggtgggaaaGGTGAGTCAACAGCGGGG
GCCACGGCGACAGTTCCACCATCGGGAGAAACTGCGGCGTGA back to top
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