Properties
| Property Name | Value |
|---|
| Product | choline-phosphate cytidylyltransferase b |
| Orig transcript id | gnl|cribi|Naga_100049g31.2083.mrna |
| Orig protein id | gnl|cribi|Naga_100049g31.2083 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:458295..460698 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5637 ID=rna5637|Name=rna5637|organism=Nannochloropsis gaditana|type=mRNA|length=1125bp
ATGGCGCTTGTCCTGGCTGCTTCCTCCCTTCACCTCCTCTTCATCGTAAA
CTCTGCGCACTCTTACCAGATATCCCGCTCGCCCCAGTTTCACCAATATC
ATCGCAAAGAGGCGCTGCAGCAATCAGCTGGTATCGCTTCCGCCACGGCC
GCTGTGTGGCTCGGACCTTTGTCTGTGCCTCAACCCGCTGAGGCGACGGG
GTTGGACAACGTCGAACCTACAAGCTCAACAACCTCCCCCGATACGCCGG
CTATCAACCCTGACACTACACCAAGAAGCAAACTACTCGCCCGCTTCTCC
ACGTCCGATCTTACAAGCCCTGGGCTCTCAGGGCTTGGTGGCGCCAAGCT
TCTTTTCTTGCCGCAGTTCCTTTTTGGCACGTGGAACGCAACCTTATGCT
TGAAAGACATACAACTGCCACTCGGAGAGCGATTCGTCCCCCCACAAATA
TTACGTTCCCTAAATGCAGTGCAAATGGAAAAGCCTACGTCGTTCCCTCT
TCGCTTCTACTCGACCTTGCCTGACACAGGAGAGAACACCTTACGCGTCA
CCTTGGGGGAGGTCCCCAAGTCGGAGATCGTCCCGGATCGCGTGTATAAC
ACTAGGTCTGTTTTGGACGCCTTCTACGGCTACCCAGCCGTGGGCGAAAT
AGATTACGATATTTCCAAAAATCCGCTCCGTATGGACGTGGCTTTTGCAA
CCATGGGTCCAGATCTGCAACCCTTGCCCTCCCGAAGGCAACAGCTACTT
TTCAACAACTTGCAAAGCGATCGAGTCCGTCCCAATGACTTATTCGTCTG
CTCTGAGTACGTTCGCACTGTCACTTTGGGCCCTGGTCGGCGTGTGACGG
TCACAGATTCCGAAACCTTATCGCAGTACGAGCTGATGGAAGACGGGCGC
ATCGAGGGCAAGCAACGCGTGGCCTTTTACCTGACGCCCAACCCCAATAC
AGTGGAGGGGACCCTCTTCTTTGAGGCTAACAACAAAGCTGTCGCCTTGT
TTGATTATTCTTTCACAATGAAAAAGGTAGGAGATTGCGTGATGACACCG
AAGGCCGTGGAGCAATGCACGGCACCGGAAGGCAGCTACGTGAAGGTGAA
CGAACCAGTGGATGATGGCGCTTAG back to topprotein sequence of rna5637 >rna5637-protein ID=rna5637-protein|Name=rna5637|organism=Nannochloropsis gaditana|type=polypeptide|length=408bp
MTARQKRADVNKNGDSGGSKRLRERALGEETEATSEQRRDSVHLNEDQLQ
QPTAVTSSSASLSLSSSSSSSSSISSPSPRRQGIFVEKAETRRHFLSSFS
QSNPASPPSSSSSSSSLSASSVPSEDEGETYEVGHNDLKPKLDLLQEGDP
GTLTGVPIRLYADGVFDLFHFGHTKALEQAKKLYPHTYLMVGCCSDATTH
RYKGITVLSEEERYESLRHCRWVDEVIEDAPWVAHKDFLVEHNIDYVCHD
ALPYADTSGEAEDGDVYLHLKRMGKFLETQRTEGISTSDIINRIIVRYDD
YVLRQLQRGYSAKEMNVPQWKGTTLLTKKYLHDVATTTSKTLGELQLSFL
DLFNRNSDIRCTLRKRRKETWHRVSALLKTPFVVMGEGGKTKRGWNAAGA
PVSKKLKR back to topmRNA from alignment at CM002466.1:458295..460698- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5637 ID=rna5637|Name=rna5637|organism=Nannochloropsis gaditana|type=mRNA|length=2404bp|location=Sequence derived from alignment at CM002466.1:458295..460698- (Nannochloropsis gaditana)
GTCGACTCGAGTTCGTACGCTTGCCTGCTGCTCGAAGATAGGGCGCCATA
TCCTCTTGATCCGTCGGGCTGAAAAACAGCACGAACTGCAGCATTAATCA
CATAGATATGAACTGCTTAACGATTTGGAAAGCTGACGCATGATTTTCTC
TTCCGTTTTTTCGTAAAAACAGTCTCGTGATCAAGGTTGCCTGGCCGCGC
CTCTCCTTCAGCTAGCTTCGGGGCCTCAAAAATCATAAAAGCGTCGCGAG
CTTTCTTCAGCATCAACACGGTTCAGGTTTTAGTATGACTGCCCGACAAA
AACGCGCAGATGTCAATAAAAATGGTGATTCTGGCGGCAGTAAGCGGCTG
AGGGAAAGGGCACTGGGGGAGGAAACAGAAGCGACGTCCGAACAACGCCG
CGATTCTGTCCATTTGAACGAGGATCAGCTTCAGCAACCTACAGCAGTCA
CATCCTCGTCTGCATCGCTCTCTCTATCGTCTTCTTCGTCTTCTTCGTCG
TCCATTTCTTCGCCTTCTCCGCGTAGACAGGGCATCTTTGTCGAAAAGGC
CGAGACCAGGCGTCACTTCCTTTCCTCTTTTTCTCAGTCAAACCCCGCTT
CTCCTCCGTCTTCTTCCTCTTCCTCGTCCTCTCTTTCTGCGTCCTCAGTG
CCGTCTGAGGACGAAGGAGAAACTTACGAAGTGGGGCATAACGATCTGAA
ACCCAAGCTTGATCTCTTGCAAGAAGGAGACCCCGGCACCCTGACAGGCG
TTCCGATCCGATTGTATGCGGACGGTGTTTTCGATCTGTTCCATTTTGGG
CATACCAAGGCCCTGGAGCAGGCCAAGAAACTCTACCCCCACACGTACCT
GATGGTGGGGTGCTGCTCGGACGCGACGACGCACCGATACAAGGGCATCA
CGGTGCTGTCGGAGGAGGAGCGGTACGAGTCGCTCCGGCACTGCAGGTGG
GTGGACGAGGTGATCGAGGACGCGCCTTGGGTGGCGCACAAGGACTTCCT
TGTGGAACACAACATCGACTACGTCTGCCACGATGCCCTGCCCTACGCCG
ACACGTCGGGCGAGGCCGAAGACGGTGACGTCTACCTGCACTTGAAGCGC
ATGGGCAAGTTCTTGGAGACGCAGCGGACGGAGGGTATCTCCACGTCGGA
CATTATCAATCGGAGTAAGTAATAAAGAGGATCGTAGTGCGTCTGGTGGG
AACAGGAGGGTGGCCGGGTGCGAGGCGCGCCTCTCTTGCCTCCCATTACA
CTTGCCTTATCCCCTCTTCTTCTTTTGCCTCTCCCTTCAGTCATTGTCCG
CTACGACGACTATGTCCTCCGCCAGCTCCAACGGGGCTACAGCGCCAAGG
AGATGAACGTTCCCCAGTGGAAGGGGACCACCCTGCTCACCAAAAAGTAT
TTGCACGACGTGGCCACCACTACCTCCAAGACCTTGGGGGAGCTCCAGCT
TTCCTTTCTGGACCTCTTCAATCGAAACTCGGACATCCGCTGCACACTCC
GAAAGAGGAGAAAAGAGACGTGGCACCGTGTCTCGGCCTTGTTGAAGACA
CCCTTCGTTGTCATGGGGGAGGGAGGGAAAACGAAGCGAGGATGGAATGC
GGCGGGCGCCCCAGTGAGCAAGAAATTGAAACGCTGATATAGTGATAGGG
CGATGAAATTATGGGATTGTGAAATTTTTGAGATTTAGCTATCGCTGCGG
CCATTCGTTGGCTGTGAGCCTGGGCCTGCTCGACAGAAGTGGGAGAAGAC
ACTAGAAAAATTTAGCGCATGCGACGCAGAAAATGGTTTGCAAGATTAAT
ACCGAGGAAATGTCAGAGGAAAATGCGGACTTTTATGTGTGATGGGATCA
GGTGGTACGTGGTCTATCGACGTGTGTAAATCAGTCGGGATGGAGAGGAG
TGAATGTACGGGAGGTACGTGATAGACAGTGTGCGAGGACTCCATGAGGT
GAAAGTCTACAAAAGAGAAGGACAAGTTGGCCATCTGTCAAGGATACGGG
GTAGAGAACAAGGCTTGATGTTTAGGACAATGCCGATGGAGAAGTTGCAC
TAGGTCTAGGGTGTTGGCTCAGAAGGGAAAAATGCCTTTTTTGCAACTTG
AAATGATTGATTATCCTATTCTCTCGTCAAACGGAAACGTTGCGGTATGC
ATCTTTAGCGCGTCGCCATTTGTCCTCTAAATACATGAAATACTGTTCTT
CTTCTCTTTATTTGCCCCTTGCGTTGGATGTTCCCGTAACGGTTATCCCT
TCTAAGCGCCATCATCCACTGGTTCGTTCACCTTCACGTAGCTGCCTTCC
GGTGCCGTGCATTGCTCCACGGCCTTCGGTGTCATCACGCAATCTCCTAC
CTTTTTCATTGTGAAAGAATAATCAAACAAGGCGACAGCTTTGTTGTTAG
CCTC back to topCoding sequence (CDS) from alignment at CM002466.1:458295..460698- >rna5637 ID=rna5637|Name=rna5637|organism=Nannochloropsis gaditana|type=CDS|length=2454bp|location=Sequence derived from alignment at CM002466.1:458295..460698- (Nannochloropsis gaditana)
TCATTGTCCGCTACGACGACTATGTCCTCCGCCAGCTCCAACGGGGCTAC
AGCGCCAAGGAGATGAACGTTCCCCAGTGGAAGGGGACCACCCTGCTCAC
CAAAAAGTATTTGCACGACGTGGCCACCACTACCTCCAAGACCTTGGGGG
AGCTCCAGCTTTCCTTTCTGGACCTCTTCAATCGAAACTCGGACATCCGC
TGCACACTCCGAAAGAGGAGAAAAGAGACGTGGCACCGTGTCTCGGCCTT
GTTGAAGACACCCTTCGTTGTCATGGGGGAGGGAGGGAAAACGAAGCGAG
GATGGAATGCGGCGGGCGCCCCAGTGAGCAAGAAATTGAAACGCTGAATG
ACTGCCCGACAAAAACGCGCAGATGTCAATAAAAATGGTGATTCTGGCGG
CAGTAAGCGGCTGAGGGAAAGGGCACTGGGGGAGGAAACAGAAGCGACGT
CCGAACAACGCCGCGATTCTGTCCATTTGAACGAGGATCAGCTTCAGCAA
CCTACAGCAGTCACATCCTCGTCTGCATCGCTCTCTCTATCGTCTTCTTC
GTCTTCTTCGTCGTCCATTTCTTCGCCTTCTCCGCGTAGACAGGGCATCT
TTGTCGAAAAGGCCGAGACCAGGCGTCACTTCCTTTCCTCTTTTTCTCAG
TCAAACCCCGCTTCTCCTCCGTCTTCTTCCTCTTCCTCGTCCTCTCTTTC
TGCGTCCTCAGTGCCGTCTGAGGACGAAGGAGAAACTTACGAAGTGGGGC
ATAACGATCTGAAACCCAAGCTTGATCTCTTGCAAGAAGGAGACCCCGGC
ACCCTGACAGGCGTTCCGATCCGATTGTATGCGGACGGTGTTTTCGATCT
GTTCCATTTTGGGCATACCAAGGCCCTGGAGCAGGCCAAGAAACTCTACC
CCCACACGTACCTGATGGTGGGGTGCTGCTCGGACGCGACGACGCACCGA
TACAAGGGCATCACGGTGCTGTCGGAGGAGGAGCGGTACGAGTCGCTCCG
GCACTGCAGGTGGGTGGACGAGGTGATCGAGGACGCGCCTTGGGTGGCGC
ACAAGGACTTCCTTGTGGAACACAACATCGACTACGTCTGCCACGATGCC
CTGCCCTACGCCGACACGTCGGGCGAGGCCGAAGACGGTGACGTCTACCT
GCACTTGAAGCGCATGGGCAAGTTCTTGGAGACGCAGCGGACGGAGGGTA
TCTCCACGTCGGACATTATCAATCGGATCATTGTCCGCTACGACGACTAT
GTCCTCCGCCAGCTCCAACGGGGCTACAGCGCCAAGGAGATGAACGTTCC
CCAGTGGAAGGGGACCACCCTGCTCACCAAAAAGTATTTGCACGACGTGG
CCACCACTACCTCCAAGACCTTGGGGGAGCTCCAGCTTTCCTTTCTGGAC
CTCTTCAATCGAAACTCGGACATCCGCTGCACACTCCGAAAGAGGAGAAA
AGAGACGTGGCACCGTGTCTCGGCCTTGTTGAAGACACCCTTCGTTGTCA
TGGGGGAGGGAGGGAAAACGAAGCGAGGATGGAATGCGGCGGGCGCCCCA
GTGAGCAAGAAATTGAAACGCTGAATGACTGCCCGACAAAAACGCGCAGA
TGTCAATAAAAATGGTGATTCTGGCGGCAGTAAGCGGCTGAGGGAAAGGG
CACTGGGGGAGGAAACAGAAGCGACGTCCGAACAACGCCGCGATTCTGTC
CATTTGAACGAGGATCAGCTTCAGCAACCTACAGCAGTCACATCCTCGTC
TGCATCGCTCTCTCTATCGTCTTCTTCGTCTTCTTCGTCGTCCATTTCTT
CGCCTTCTCCGCGTAGACAGGGCATCTTTGTCGAAAAGGCCGAGACCAGG
CGTCACTTCCTTTCCTCTTTTTCTCAGTCAAACCCCGCTTCTCCTCCGTC
TTCTTCCTCTTCCTCGTCCTCTCTTTCTGCGTCCTCAGTGCCGTCTGAGG
ACGAAGGAGAAACTTACGAAGTGGGGCATAACGATCTGAAACCCAAGCTT
GATCTCTTGCAAGAAGGAGACCCCGGCACCCTGACAGGCGTTCCGATCCG
ATTGTATGCGGACGGTGTTTTCGATCTGTTCCATTTTGGGCATACCAAGG
CCCTGGAGCAGGCCAAGAAACTCTACCCCCACACGTACCTGATGGTGGGG
TGCTGCTCGGACGCGACGACGCACCGATACAAGGGCATCACGGTGCTGTC
GGAGGAGGAGCGGTACGAGTCGCTCCGGCACTGCAGGTGGGTGGACGAGG
TGATCGAGGACGCGCCTTGGGTGGCGCACAAGGACTTCCTTGTGGAACAC
AACATCGACTACGTCTGCCACGATGCCCTGCCCTACGCCGACACGTCGGG
CGAGGCCGAAGACGGTGACGTCTACCTGCACTTGAAGCGCATGGGCAAGT
TCTTGGAGACGCAGCGGACGGAGGGTATCTCCACGTCGGACATTATCAAT
CGGA back to top
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