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Properties
| Property Name | Value |
|---|
| Product | exonuclease 1-like protein |
| Orig transcript id | gnl|cribi|Naga_100049g36.2097.mrna |
| Orig protein id | gnl|cribi|Naga_100049g36.2097 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:448165..451067 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5631 ID=rna5631|Name=rna5631|organism=Nannochloropsis gaditana|type=mRNA|length=1184bp
CCGTGCGTGCGAGCGGCACGTGCAATGTGTTTTCTTCGAGCAAATTTGGG
CAAGCACTGTCCCATTCTTTTCGCTATAGTCGTACTTTTCATAAAAGCTT
CCAGATGTACATCCTCGCCACCAATGGACGATGCCCCTTGCTCTGTAAAA
GGTTTTGAAGCATATTGCGCAGAGTTCCACAAGGACTACAGTGCCAATTC
TCAAGAGCAAGCCCGGCGCTTCGAGGCTTGGGTCAAGTCTTGCCTATTCT
TAGAGCAGTACAAAGTGGACCATCCCGATGCCTCGTTCCATATGGGTTTC
AATCCGCTAAGTGACCGTCTTCCTGAAGAGCATGATGCCATTTTTGGGTT
GAAAGTTATACCTCGAGGGCGAGAGGCCCCGTCTGCCCCTTCTTCCTCCA
GCCTTTCAAGCGATAATTTAGACAGCCATCGAGGCCTTCAGGGTTTCCAC
AAGCACAACCGATCGGAGGAAGAGGATTCGAAGGAGCAGGGGGGCGAGAA
AAGCGAATATTTCGTTCCATCGGAATTGGCTAAAGATCTGTCTCCTAGAG
CTTTGCCCCCGGCGGTGGATTGGCGCACTGCCAATCTCAACCCTGAGGGT
GTTGTGGCCGTGACGCCGGTCAAAAATCAGGGTGCGTGCGGGGCTTGCTG
GGCATTCACGACCACCGCCGCCGTGGAGGGTGCAGTAGCAGTGACGACTG
GGGTCCTCAACGAACTGAGCAACCAGGAGCTGATCGACTGCGTGACGCAG
AATGAGGGGTGTAACGGCGGTGATTTCGACTATGCCTTTAAATTTGTCGT
CAGAAAGGGCTTGGCTAGCACCACTGATTATCAATTTACGCAATCGCAGG
GCAAGTGTCGATCTGGCGCATACCCGCTTGCCTCGCGTATCGCAGCGGCC
TACGAGACCGACCCCTGCAGCGAGAATGGCCTCTTGAGTATCGTGTCCCG
CCGCCCTGTGGCTGTGGCCATCGATGGATCCTGCGACGCTTTCATCCAAT
ACAAGGGGGGGATCTATACGCAGAGCTGCGGGTCGGATCTGAATCATGCG
GTGACCATTGTCGGCTACGGCACGGATGAGAGGACGGGGACGGACTATTG
GGTGAGTGCTTCCCCAGGGCCTTCGATGATCGATGTTCTATGACGAAGGC
CATCACGGGGTCTAATTGAAAAGGTTGGGTTAAG back to topprotein sequence of rna5631 >rna5631-protein ID=rna5631-protein|Name=rna5631|organism=Nannochloropsis gaditana|type=polypeptide|length=793bp
MGIQGLLSSLKPVTTPVHVRDLRGLRVGVDAYVWLHRGAYGCAAELCQGK
HTTQYLHVCFQRLNLLLRNGVGHVYIVFDGGPLPAKQNTEQERRARREES
RQKALQLMAEGHAKDAFAFFAKAIDVTPVMAKAWVDTIQAAKLANVSCVV
APYEADAQLAYMCRTGDLDAVFTEDSDLLATGCPRVLFKLNESTGMAQQI
MHADLFKRPIPGLGDLRTWAGESFLAMCILSGCDYLPSVPGLGLRSAYRL
IQRHKTASKAIRAMRFEAKHRVPTDYETRFFQALQTFRHQRVFDLTHRTL
THVHPLPPELIAASPSSLDHLGPWMEDAIAASIADCTLDPILRAPFPSII
TPTCPSRASRNCLKAPICASFSCRKKNSVPQSKIVAFLPSTGYREEVKIR
QMQHEVTVNSKDLSPKETSEGVENATVFKNVAYRPGLRRSTIPLALHGNK
RITSFLLSSNKKGLPKSIKDQSSVGNATNRSNYLDSVTPSRGQRRPGASP
GVTNGKEPLSGSERSPLLGVDQVCKDTITSEPAVSVACRGSHRSSWFGTT
EAGPLRSNGKMGLPSLPPMSTSKRRRTLGGRPSMFALRRFKSEDMTADMG
ASKNLGAFGGDVHESNMRIEEEDMWGGDHEGIRSDTAYGGYASDSLQPPT
PGTPCAGTATPKEIDAVEAETPTNRIEIYGTNPEYKIHQAADKCTQSAQT
ASGGDQSFKEMKLSPTLCNDMSKSEQAYRPPPTRHLHLRERKRRLEMPTA
QAQILERVGLRGTVSQSREINAPISLEVFRYEDSDWPLSPTFS back to topmRNA from alignment at CM002466.1:448165..451067+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5631 ID=rna5631|Name=rna5631|organism=Nannochloropsis gaditana|type=mRNA|length=2903bp|location=Sequence derived from alignment at CM002466.1:448165..451067+ (Nannochloropsis gaditana)
TGGCGCGAAACAACCAGTGTCAtagcagaggaagacggatAATTAGTCAT
TGCATCGACAAATGGTCATTGCGACACGCGAGCGGCGCTACAAAAATGTG
AATGCGCCTAGAATTCTCTTGTAGAAGCCGCTATTAGATTACGAAATCGC
GGTACGCATTGAATTGAATTGGGCTGTCAAAAATCGAAATGGCAAAAAGC
GCGGTAAACTGAAAAGCTTCAGATTGTCAGAAGCAGGTtacgacgacgaa
gagcaTAATACTGCGTGGGCGACATCACTCGAAATGGGAATTCAAGGTCT
ACTGAGCAGCTTAAAACCTGTCACAACCCCTGTGCATGTGCGAGATTTGA
GAGGCCTACGCGTGGGTGTAGACGCTTATGTATGGCTGCACCGGGGTGCC
TACGGCTGTGCAGCAGAGCTTTGCCAAGGAAAGCACACGACGCAGTATTT
GCACGTATGCTTTCAGCGCCTTAATCTTTTGCTACGTAACGGTGTCGGTC
ACGTCTACATCGTCTTCGACGGAGGGCCCTTGCCTGCCAAGCAAAATACT
GAACAAGAGCGCCGTGCCCGCCGAGAGGAAAGCCGTCAAAAAGCACTGCA
GTTGATGGCAGAGGGTCATGCAAAGGATGCGTTTGCTTTCTTTGCGAAAG
CTATAGACGTTACTCCTGTCATGGCCAAAGCGTGGGTGGACACCATCCAG
GCGGCCAAACTAGCCAACGTCTCGTGTGTGGTTGCGCCGTATGAAGCGGA
CGCTCAGCTAGCATACATGTGCCGCACGGGCGATCTGGACGCTGTTTTCA
CAGAGGACTCGGATCTTCTGGCCACGGGATGTCCTCGAGTACTATTTAAA
CTGAACGAGTCCACAGGCATGGCGCAGCAGATTATGCATGCTGACTTGTT
CAAGAGACCGATCCCAGGTCTGGGCGACCTcaggacgtgggcgggagAGT
CGTTTTTGGCCATGTGCATCCTGTCAGGCTGCGACTATCTACCCAGTGTC
CCTGGCTTGGGCCTGCGCTCAGCTTATCGACTAATTCAGCGACACAAAAC
AGCCAGCAAGGCGATTCGGGCGATGCGTTTCGAAGCCAAGCACAGGGTGC
CAACTGACTACGAGACACGTTTCTTCCAGGCCCTGCAAACTTTTCGGCAC
CAGCGAGTGTTTGATTTGACACATCGAACACTGACGCAtgtccatcctct
ccctccggaACTTATCGCGGCCTCCCCAAGCTCTCTGGATCACTTAGGCC
CCTGGATGGAGGATGCCATTGCGGCAAGCATCGCTGACTGCACGCTGGAC
CCCATCTTACGagctcctttcccgtccATCATAACGCCGACCTGCCCAAG
TCGTGCTTCACGCAACTGCTTAAAAGCCCCAATTTGCGCATCTTTTAGCT
GCAGAAAGAAAAACTCTGTACCTCAATCGAAAATTGTGGCTTTTCTCCCG
TCAACGGGATACcgagaggaagtgaagaTAAGACAAATGCAGCACGAAGT
CACAGTAAATAGTAAGGACCTTAGCCCTAAGGAAACTTCCGAGGGTGTTG
AAAATGCCACTGTATTCAAGAATGTTGCATATCGTCCTGGCCTCCGTAGA
AGTACGATCCCTCTGGCACTTCATGGAAACAAGCGCATTACAAGCTTCTT
ACTGTCATCAAATAAAAAAGGGCTGCCAAAATCAATCAAAGATCAAAGCA
GTGTTGGCAATGCAACCAACAGGAGCAATTATTTAGACTCTGTCACACCT
TCACGGGGTCAAAGACGACCTGGAGCGAGTCCAGGTGTCACAAATGGAAA
GGAACCGCTCTCAGGATCCGAGAGGTCTCCACTCCTAGGGGTGGATCAGG
TCTGTAAAGACACGATTACGAGTGAGCCGGCTGTCTCTGTTGCTTGTAGG
GGAAGTCACAGATCGAGCTGGTTTGGTACAACTGAAGCGGGGCCGCTCAG
GAGCAACGGAAAGATGGGATtgccgtccttgcccccgATGTCAACCTCCA
AGCGACGGAGGACGTTGGGTGGGCGCCCCTCCATGTTTGCCCTGCGGCGC
TTTAAAAGTGAAGATATGACTGCAGATATGGGCGCGTCCAAGAATCTCGG
AGCTTTCGGCGGGGATGTGCATGAGAGCAACATGCGtattgaggaggagg
acatgtgGGGTGGAGACCATGAGGGCATTCGAAGCGATACAGCGTATGGA
GGCTATGCATCGGACAGCCTGCAACCCCCCACACCGGGAACTCCGTGCGC
GGGAACGGCAACTCCCAAAGAAATAGATGCCGTTGAAGCAGAAACACCGA
CCAATAGAATAGAAATCTACGGAACCAACCCAGAATATAAAATTCATCAG
GCTGCTGACAAGTGCACGCAGTCCGCACAGACCGCCTCTGGTGGAGACCA
GTCATTCAAGGAAATGAAACTATCACCGACGCTCTGCAATGATATGTCAA
AATCGGAACAAGCATacaggcctcctccaactcgtcatcttcaccttcga
gaaagaaaaagacgccTAGAAATGCCAACGGCACAAGCACAGATACTAGA
AAGAGTAGGTTTACGAGGAACGGTATCGCAATCCCGAGAAATTAACGCGC
CAATATCGTTAGAAGTCTTTCGATACGAGGATAGTGACTGGCCTCTTTCG
CCTACCTTCTCATGAAAAGTGATTGGGGAAACACGAAGAAGGGCAGAACA
AGAACTCAAGAGCAGGCCTCTGGTACACACGTAGGATAGCGTAAATGGAG
AAAAGCACTTTCAAAAAATCAATTATGTTAGTTTTTTTGTTGGATATCGG
GAGAGAGGCACTAATAAAGAAGGAATGTAGATTGATTGATTAGGTATTTT
GTCACTTATCTGGAGCAATCATAGATCCACTATTTAGTTATCTGCTTTAC
CGC back to topCoding sequence (CDS) from alignment at CM002466.1:448165..451067+ >rna5631 ID=rna5631|Name=rna5631|organism=Nannochloropsis gaditana|type=CDS|length=2382bp|location=Sequence derived from alignment at CM002466.1:448165..451067+ (Nannochloropsis gaditana)
ATGGGAATTCAAGGTCTACTGAGCAGCTTAAAACCTGTCACAACCCCTGT
GCATGTGCGAGATTTGAGAGGCCTACGCGTGGGTGTAGACGCTTATGTAT
GGCTGCACCGGGGTGCCTACGGCTGTGCAGCAGAGCTTTGCCAAGGAAAG
CACACGACGCAGTATTTGCACGTATGCTTTCAGCGCCTTAATCTTTTGCT
ACGTAACGGTGTCGGTCACGTCTACATCGTCTTCGACGGAGGGCCCTTGC
CTGCCAAGCAAAATACTGAACAAGAGCGCCGTGCCCGCCGAGAGGAAAGC
CGTCAAAAAGCACTGCAGTTGATGGCAGAGGGTCATGCAAAGGATGCGTT
TGCTTTCTTTGCGAAAGCTATAGACGTTACTCCTGTCATGGCCAAAGCGT
GGGTGGACACCATCCAGGCGGCCAAACTAGCCAACGTCTCGTGTGTGGTT
GCGCCGTATGAAGCGGACGCTCAGCTAGCATACATGTGCCGCACGGGCGA
TCTGGACGCTGTTTTCACAGAGGACTCGGATCTTCTGGCCACGGGATGTC
CTCGAGTACTATTTAAACTGAACGAGTCCACAGGCATGGCGCAGCAGATT
ATGCATGCTGACTTGTTCAAGAGACCGATCCCAGGTCTGGGCGACCTcag
gacgtgggcgggagAGTCGTTTTTGGCCATGTGCATCCTGTCAGGCTGCG
ACTATCTACCCAGTGTCCCTGGCTTGGGCCTGCGCTCAGCTTATCGACTA
ATTCAGCGACACAAAACAGCCAGCAAGGCGATTCGGGCGATGCGTTTCGA
AGCCAAGCACAGGGTGCCAACTGACTACGAGACACGTTTCTTCCAGGCCC
TGCAAACTTTTCGGCACCAGCGAGTGTTTGATTTGACACATCGAACACTG
ACGCAtgtccatcctctccctccggaACTTATCGCGGCCTCCCCAAGCTC
TCTGGATCACTTAGGCCCCTGGATGGAGGATGCCATTGCGGCAAGCATCG
CTGACTGCACGCTGGACCCCATCTTACGagctcctttcccgtccATCATA
ACGCCGACCTGCCCAAGTCGTGCTTCACGCAACTGCTTAAAAGCCCCAAT
TTGCGCATCTTTTAGCTGCAGAAAGAAAAACTCTGTACCTCAATCGAAAA
TTGTGGCTTTTCTCCCGTCAACGGGATACcgagaggaagtgaagaTAAGA
CAAATGCAGCACGAAGTCACAGTAAATAGTAAGGACCTTAGCCCTAAGGA
AACTTCCGAGGGTGTTGAAAATGCCACTGTATTCAAGAATGTTGCATATC
GTCCTGGCCTCCGTAGAAGTACGATCCCTCTGGCACTTCATGGAAACAAG
CGCATTACAAGCTTCTTACTGTCATCAAATAAAAAAGGGCTGCCAAAATC
AATCAAAGATCAAAGCAGTGTTGGCAATGCAACCAACAGGAGCAATTATT
TAGACTCTGTCACACCTTCACGGGGTCAAAGACGACCTGGAGCGAGTCCA
GGTGTCACAAATGGAAAGGAACCGCTCTCAGGATCCGAGAGGTCTCCACT
CCTAGGGGTGGATCAGGTCTGTAAAGACACGATTACGAGTGAGCCGGCTG
TCTCTGTTGCTTGTAGGGGAAGTCACAGATCGAGCTGGTTTGGTACAACT
GAAGCGGGGCCGCTCAGGAGCAACGGAAAGATGGGATtgccgtccttgcc
cccgATGTCAACCTCCAAGCGACGGAGGACGTTGGGTGGGCGCCCCTCCA
TGTTTGCCCTGCGGCGCTTTAAAAGTGAAGATATGACTGCAGATATGGGC
GCGTCCAAGAATCTCGGAGCTTTCGGCGGGGATGTGCATGAGAGCAACAT
GCGtattgaggaggaggacatgtgGGGTGGAGACCATGAGGGCATTCGAA
GCGATACAGCGTATGGAGGCTATGCATCGGACAGCCTGCAACCCCCCACA
CCGGGAACTCCGTGCGCGGGAACGGCAACTCCCAAAGAAATAGATGCCGT
TGAAGCAGAAACACCGACCAATAGAATAGAAATCTACGGAACCAACCCAG
AATATAAAATTCATCAGGCTGCTGACAAGTGCACGCAGTCCGCACAGACC
GCCTCTGGTGGAGACCAGTCATTCAAGGAAATGAAACTATCACCGACGCT
CTGCAATGATATGTCAAAATCGGAACAAGCATacaggcctcctccaactc
gtcatcttcaccttcgagaaagaaaaagacgccTAGAAATGCCAACGGCA
CAAGCACAGATACTAGAAAGAGTAGGTTTACGAGGAACGGTATCGCAATC
CCGAGAAATTAACGCGCCAATATCGTTAGAAGTCTTTCGATACGAGGATA
GTGACTGGCCTCTTTCGCCTACCTTCTCATGA back to top
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