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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF3419 |
| Orig transcript id | gnl|cribi|Naga_100016g36.2934.mrna |
| Orig protein id | gnl|cribi|Naga_100016g36.2934 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:311133..314424 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5571 ID=rna5571|Name=rna5571|organism=Nannochloropsis gaditana|type=mRNA|length=1338bp
GGGAAACAAATTGATGTCATACGACCAAGCTGTCCAGCGTTGTGGGGGGC
TGAAACTTATACCTTACACAACATATTACGTACGACCCAACACCACTCGA
TACAGGCGCGGAGTGGGAAAGCGCGCGGTCACATGATCATGAAAGAAAGA
CCCTAAAGGAGATCCTAAGAGGAAAATGTGCGTATATCGAAAGCAGAGAT
GGCATAGAGATGGTGCGTGGTCTCGTGACGCTAGACTGGACTAGCCCGAG
CGCCTGACATTTGACAAGTGCTCATGCCATCGGAAGGCGACGGTCCCGAA
GCGCATATCCTGCATTTGCGCGAAAAGTTGAAGGCTGTGGAGGCAAGGCG
CATCACACTGCACCGCCGACGAGCCCTTGTAGAGAAGAAACGGCGCCGGC
TTCAAGGTCTTCTTGATCTGTGGCAATCACTTAACAATTCGGCAGCAGAG
GCGCTGCTTGATTTGTCCGAAAGCCATCAAGCAACACATGGTTCAGAACT
TAGTGCAGGGGCACGACTCGAGGCGTTAACACAATTGAATGTCGCCAACG
ATTGTTTTCACGTGTGGCATTCAGGGCCCTTTGCCACGATGAATGGCTGC
AGTATCGGTCGACTGCCCGCTTTCGCGGCAGTGGAGTGGACAGACATCAA
CGCCGGACTCGGGCAGGCGATCCTTTTGCTTGACACACTAGTGAAGCAAA
CAGGCTTCCGCTTTCGTCGCCTCGAGCTCGTGCCATTCGGCTCCTTTTCC
AAGATCTTGAGATCCCCATGTGACTTGTCGGACGTGGAGACGAAGTTGAT
GCCGAACAGTCCTCGAATCACCGCCAGCAATGCCATGAGTTTCTACTACG
ACGAGGCCAACCTGGCGTTTTTCCCTCGTCGGAACATGAATGCGGCGCTG
GTTGCATTCCTGCAGTGCGTGGAGGAGTTCGGATCCCACGTGGAGGGGCT
AGACCCCACGATCCGCCTCCCGCACAGGGTGCAGGGCAACAAGATCGGCG
GTCTACCCATCGTCTTGACGCCCGGCGAAGAGGACACATGGAACCGAGCT
CTCAAGTACCTATTGACAGACCTGAAATGGCTCTCGGCCTGGAGTGCTCG
ACATGTACTGCTGTAAAGATTGATTCCTGTCCACGCAAAGCTCTGAACCG
TGAAAGCAACTCGAACGATCCTAAATGTTACTCCCCCGTTATCTACTTCT
TTTGCGATTCCTTCCACTTAAGATTTTTGCAGGTGCTTGATCTGTACTCG
CAATGTATAGCACAAGACTTAAATTGAGGTCCCCGCTCGACTATTTACCC
CCGTGCAGATAAGCAAAATGCTGTCGATCAGCAATTCT back to topprotein sequence of rna5571 >rna5571-protein ID=rna5571-protein|Name=rna5571|organism=Nannochloropsis gaditana|type=polypeptide|length=753bp
MCNVPRDHMTMAAKARAWRNEKFRAIKNRARRTRDKIKGRLQPSFSFIAR
FILRSVLLLLICAFAPLLLIFALFHDWLMKKFINYAYIYNVSWEDPRMDQ
EVFNLKDDDHVITIASAGCNVLDYIIEGARVTAVDFNACQIALTELKSVA
IQRLEFPEFFAIFAKNDTALLRKLYPTVLRPGLSAASAEFWDRYVVKIQS
FMYSGSSGFLAFLAFRVVLPLLHLGWIRQAILQRMSKDDFLVLCHTHEKQ
IAICSWLLDTMLPCFALFAGVPRRQMNLGFGRENFSVIVNHVLFNTDLVH
DNYFYLGYILGEYTEECCPRYLKAENFAAMKKHLLAGKLHLFHGSIEQAI
MKNAADGDELFTVASLLDHMDWMDKGMVTSEISLLVQRMDQERGRIYWRS
FSENVHIPPLVWMGAQKVDDIYENSMGDRVGMYFSTWIANLKDSEFVVTP
RCRSWRKDGGAYRSGLAAQLLTGAKIVTAPVWKRVVQASSGKERLGGKAD
SKNGEGRTDSAHERDMEAFYKFQKEGYDGFRENFLHARMDLIQAMPLKRK
GGMVWIDVGGGTARNLEFIPVEILRKYFKAIYVVDVSPSLLGVAQQRVAA
AGLTDLVHLIEHDFTAPSIFKTLPFLEGKVDMLTFSYSLSMIPDKTAALV
NALRFLQPNGHGVLGLADFFLASNEDSGLPTMLASLRRMEATFQRKWFEQ
DRVHLISPAILKRLEKATTCVWDERFRGGVPLLPVLRPYHGAYVALTGKS
KAQ back to topmRNA from alignment at CM002466.1:311133..314424- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5571 ID=rna5571|Name=rna5571|organism=Nannochloropsis gaditana|type=mRNA|length=3292bp|location=Sequence derived from alignment at CM002466.1:311133..314424- (Nannochloropsis gaditana)
TCACGGGGCATATACTATTCAAGCGGCGGCCATCGGATGCGAGAATCATC
TCAAAATCTTAAGCGTAGCCAACGCTTTTGATCGAGCTTACCACTAAAGT
AATCCTCATTAATTTTGCCCTGTCGCACAGGTTGGACATCACTCGCCGGC
CTGCCGTATTTCCAGGGCGACTCCGCAACCAACGAGAAATTGAGCTATCG
ATCCGGCCGGAAGTCCCATCCCCGTCGCTTGGCTTGCATCTATCTCCGCT
CCGCGACGCAAACAATGTGCAATGTTCCTCGCGATCACATGACTATGGCT
GCCAAAGCCCGGGCCTGGCGAAATGAGAAGTAAGTACTGCTGGGTAGAAG
GAGTCTGGCGGGCCGTTTGACGTCCCATGGTCCTCGCAGAGATAATTGAA
CAGCTCATTACGAACGCCATTAGAAGCGAGGACATTTTTGAAGGAGAACA
CACAATGAGGGAAGGGGCCTTACATCCCGCTATTCTCCTCCTTGATCCGC
AGGTTCAGGGCCATCAAGAACAGAGCCCGGCGCACTCGGGACAAGATCAA
GGGCCGACTGCAGCCCAGCTTCTCTTTCATCGCTCGTTTCATTCTGCGCA
GTGTGCTTCTTCTGTTGATCTGCGCATTCGCCCCGCTACTCCTCATTTTT
GCGCTCTTTCACGATTGGTTGATGAAAAAATTCATCAACTATGCCTACAT
ATACAATGTAAGCTGGGAGGACCCCCGCATGGATCAGGAAGTCTTCAATT
TGAAGGACGACGACCATGTCATCACAATCGCATCTGCTGGCTGCAACGTG
TTGGACTACATTATTGAGGGGGCCCGCGTCACGGCGGTTGATTTCAACGC
CTGCCAGATTGCCTTGACCGAGTTGAAATCAGTGGCGATCCAGCGTCTGG
AGTTTCCTGAGTTTTTTGCTATTTTTGCCAAGAACGACACGGCACTCCTT
CGAAAGCTCTACCCAACCGTCCTCCGACCCGGGCTATCCGCGGCTTCGGC
TGAATTTTGGGACCGATACGTGGTGAAGATTCAGTCCTTCATGTACTCGG
GCTCGTCGGGCTTTCTCGCCTTCCTGGCCTTCCGCGTGGTCTTGCCACTC
CTGCATCTGGGCTGGATCCGACAGGCTATTTTACAGCGCATGTCCAAGGA
CGATTTTCTGGTCTTGTGCCACACCCACGAAAAGCAGATCGCGATCTGCT
CCTGGCTCCTCGACACCATGCTGCCCTGTTTCGCGCTCTTTGCGGGCGTA
CCTCGTCGTCAGATGAACCTTGGCTTCGGCCGGGAAAACTTCAGCGTGAT
CGTCAACCACGTCTTGTTCAATACTGACCTGGTACATGACAACTACTTTT
ACCTGGGGTACATCCTGGGAGAGTACACGGAAGAGTGCTGCCCGCGGTAT
TTAAAGGCCGAGAACTTCGCTGCCATGAAGAAGCACCTCCTGGCTGGCAA
GCTCCATCTCTTCCACGGGTCCATTGAACAAGCCATCATGAAGAACGCGG
CCGACGGAGACGAGCTTTTCACCGTCGCCTCCTTGCTCGACCACATGGAC
TGGATGGATAAGGGCATGGTGACGTCCGAGATCTCCCTCTTGGTACAGCG
CATGGACCAGGAACGCGGCCGCATTTACTGGCGCTCTTTCTCGGAGAACG
TTCACATCCCGCCCCTCGTCTGGATGGGGGCCCAGAAGGTGGATGACATC
TACGAGAACAGCATGGGGGACCGGGTGGGCATGTACTTCTCCACGTGGAT
CGCGAACCTGAAGGACAGCGAGTTCGTGGTCACCCCTCGTTGCCGCTCCT
GGCGCAAGGACGGGGGGGCGTACCGCTCCGGCCTGGCGGCACAGTTGTTG
ACGGGCGCAAAGATTGTCACAGCCCCCGTCTGGAAGCGCGTGGTTCAGGC
CAGCAGCGGCAAGGAGAGGCTGGGCGGCAAGGCAGACAGCAAGAACGGAG
AGGGACGCACGGACAGTGCGCATGAACGAGACATGGAGGCATTCTACAAA
TTTCAAAAGGAGGGCTATGACGGCTTCCGTGAGAACTTCTTGCATGCGCG
CATGGACCTGATCCAAGCCATGCCCCTCAAGAGGAAGGGTGGCATGGTAT
GGATCGACGTTGGCGGTGGCACGGCCCGCAACCTGGAGTTCATTCCCGTC
GAGATCCTGCGCAAATACTTCAAAGCCATATACGTCGTCGATGTATCTCC
GTCCCTGCTAGGAGTCGCCCAGCAGCGTGTGGCAGCGGCTGGCTTGACCG
ACTTGGTGCACCTGATCGAGCACGACTTCACGGCCCCGTCTATCTTCAAG
ACCCTGCCCTTCCTGGAGGGGAAAGTCGACATGTTGACTTTCTCCTATTC
CCTCTCCATGATCCCCGACAAAACCGCCGCCCTGGTAAACGCCCTCCGTT
TCCTCCAACCCAACGGCCATGGCGTGCTTGGTCTGGCAGATTTCTTCTTG
GCCTCAAACGAGGATTCAGGCTTGCCCACCATGCTCGCCTCGCTCCGGCG
TATGGAAGCCACCTTCCAGCGGAAATGGTTCGAGCAGGACCGCGTTCACC
TCATCTCTCCCGCCATTCTCAAGCGTCTGGAGAAAGCAACGACGTGTGTG
TGGGACGAACGCTTTCGCGGCGGAGTGCCCCTCTTGCCGGTGCTCCGCCC
GTACCACGGTGCTTATGTCGCCTTGACCGGCAAATCAAAAGCCCAGTAGG
ATAGAAGCGAGGACCGAACATTGGCAGGAAGGTAGATGGAGCAGCATCAA
GATTATGTCGTTTGAACTCTCAACTGACGGGATGTTAGTCGTGATGATAG
GTCACGAAAATGTGATTTTGCGAAACAGTGCGTCCAGGCGTTAGCCCTCT
GGCGGGGCTTTCGTCAACATGCCGTTGACCTCCCGGTTCATAAAGGGTCG
GAGAGGTCTGTCCTTTCTGAAAATATTGAACTTTTAAACCCATCGTCCCA
AAGCAGTTCTTGAAAGGATAATTTAAGAGAAAGCAAATAGTTAGGAGGCA
GGAGACATGGATCCTAGATAAAGCGAACGGATAGAAGGCGGAAATATTGG
AAGCTTGGCCTTGAGTTAGCTGTTGTAGCGTGTCACTGTCTTGAATTCTA
CATCTGTGTGTGAAATTGTAAGAGGTAGAATTGCTGATCGACAGCATTTT
GCTTATCTGCACGGGGGTAAATAGTCGAGCGGGGACCTCAATTTAAGTCT
TGTGCTATACATTGCGAGTACAGATCAAGCACCTGCAAAAATCTTAAGTG
GAAGGAATCGCAAAAGAAGTAGATAACGGGGGAGTAACATTT back to topCoding sequence (CDS) from alignment at CM002466.1:311133..314424- >rna5571 ID=rna5571|Name=rna5571|organism=Nannochloropsis gaditana|type=CDS|length=4524bp|location=Sequence derived from alignment at CM002466.1:311133..314424- (Nannochloropsis gaditana)
GTTCAGGGCCATCAAGAACAGAGCCCGGCGCACTCGGGACAAGATCAAGG
GCCGACTGCAGCCCAGCTTCTCTTTCATCGCTCGTTTCATTCTGCGCAGT
GTGCTTCTTCTGTTGATCTGCGCATTCGCCCCGCTACTCCTCATTTTTGC
GCTCTTTCACGATTGGTTGATGAAAAAATTCATCAACTATGCCTACATAT
ACAATGTAAGCTGGGAGGACCCCCGCATGGATCAGGAAGTCTTCAATTTG
AAGGACGACGACCATGTCATCACAATCGCATCTGCTGGCTGCAACGTGTT
GGACTACATTATTGAGGGGGCCCGCGTCACGGCGGTTGATTTCAACGCCT
GCCAGATTGCCTTGACCGAGTTGAAATCAGTGGCGATCCAGCGTCTGGAG
TTTCCTGAGTTTTTTGCTATTTTTGCCAAGAACGACACGGCACTCCTTCG
AAAGCTCTACCCAACCGTCCTCCGACCCGGGCTATCCGCGGCTTCGGCTG
AATTTTGGGACCGATACGTGGTGAAGATTCAGTCCTTCATGTACTCGGGC
TCGTCGGGCTTTCTCGCCTTCCTGGCCTTCCGCGTGGTCTTGCCACTCCT
GCATCTGGGCTGGATCCGACAGGCTATTTTACAGCGCATGTCCAAGGACG
ATTTTCTGGTCTTGTGCCACACCCACGAAAAGCAGATCGCGATCTGCTCC
TGGCTCCTCGACACCATGCTGCCCTGTTTCGCGCTCTTTGCGGGCGTACC
TCGTCGTCAGATGAACCTTGGCTTCGGCCGGGAAAACTTCAGCGTGATCG
TCAACCACGTCTTGTTCAATACTGACCTGGTACATGACAACTACTTTTAC
CTGGGGTACATCCTGGGAGAGTACACGGAAGAGTGCTGCCCGCGGTATTT
AAAGGCCGAGAACTTCGCTGCCATGAAGAAGCACCTCCTGGCTGGCAAGC
TCCATCTCTTCCACGGGTCCATTGAACAAGCCATCATGAAGAACGCGGCC
GACGGAGACGAGCTTTTCACCGTCGCCTCCTTGCTCGACCACATGGACTG
GATGGATAAGGGCATGGTGACGTCCGAGATCTCCCTCTTGGTACAGCGCA
TGGACCAGGAACGCGGCCGCATTTACTGGCGCTCTTTCTCGGAGAACGTT
CACATCCCGCCCCTCGTCTGGATGGGGGCCCAGAAGGTGGATGACATCTA
CGAGAACAGCATGGGGGACCGGGTGGGCATGTACTTCTCCACGTGGATCG
CGAACCTGAAGGACAGCGAGTTCGTGGTCACCCCTCGTTGCCGCTCCTGG
CGCAAGGACGGGGGGGCGTACCGCTCCGGCCTGGCGGCACAGTTGTTGAC
GGGCGCAAAGATTGTCACAGCCCCCGTCTGGAAGCGCGTGGTTCAGGCCA
GCAGCGGCAAGGAGAGGCTGGGCGGCAAGGCAGACAGCAAGAACGGAGAG
GGACGCACGGACAGTGCGCATGAACGAGACATGGAGGCATTCTACAAATT
TCAAAAGGAGGGCTATGACGGCTTCCGTGAGAACTTCTTGCATGCGCGCA
TGGACCTGATCCAAGCCATGCCCCTCAAGAGGAAGGGTGGCATGGTATGG
ATCGACGTTGGCGGTGGCACGGCCCGCAACCTGGAGTTCATTCCCGTCGA
GATCCTGCGCAAATACTTCAAAGCCATATACGTCGTCGATGTATCTCCGT
CCCTGCTAGGAGTCGCCCAGCAGCGTGTGGCAGCGGCTGGCTTGACCGAC
TTGGTGCACCTGATCGAGCACGACTTCACGGCCCCGTCTATCTTCAAGAC
CCTGCCCTTCCTGGAGGGGAAAGTCGACATGTTGACTTTCTCCTATTCCC
TCTCCATGATCCCCGACAAAACCGCCGCCCTGGTAAACGCCCTCCGTTTC
CTCCAACCCAACGGCCATGGCGTGCTTGGTCTGGCAGATTTCTTCTTGGC
CTCAAACGAGGATTCAGGCTTGCCCACCATGCTCGCCTCGCTCCGGCGTA
TGGAAGCCACCTTCCAGCGGAAATGGTTCGAGCAGGACCGCGTTCACCTC
ATCTCTCCCGCCATTCTCAAGCGTCTGGAGAAAGCAACGACGTGTGTGTG
GGACGAACGCTTTCGCGGCGGAGTGCCCCTCTTGCCGGTGCTCCGCCCGT
ACCACGGTGCTTATGTCGCCTTGACCGGCAAATCAAAAGCCCAGTAGATG
TGCAATGTTCCTCGCGATCACATGACTATGGCTGCCAAAGCCCGGGCCTG
GCGAAATGAGAAGTTCAGGGCCATCAAGAACAGAGCCCGGCGCACTCGGG
ACAAGATCAAGGGCCGACTGCAGCCCAGCTTCTCTTTCATCGCTCGTTTC
ATTCTGCGCAGTGTGCTTCTTCTGTTGATCTGCGCATTCGCCCCGCTACT
CCTCATTTTTGCGCTCTTTCACGATTGGTTGATGAAAAAATTCATCAACT
ATGCCTACATATACAATGTAAGCTGGGAGGACCCCCGCATGGATCAGGAA
GTCTTCAATTTGAAGGACGACGACCATGTCATCACAATCGCATCTGCTGG
CTGCAACGTGTTGGACTACATTATTGAGGGGGCCCGCGTCACGGCGGTTG
ATTTCAACGCCTGCCAGATTGCCTTGACCGAGTTGAAATCAGTGGCGATC
CAGCGTCTGGAGTTTCCTGAGTTTTTTGCTATTTTTGCCAAGAACGACAC
GGCACTCCTTCGAAAGCTCTACCCAACCGTCCTCCGACCCGGGCTATCCG
CGGCTTCGGCTGAATTTTGGGACCGATACGTGGTGAAGATTCAGTCCTTC
ATGTACTCGGGCTCGTCGGGCTTTCTCGCCTTCCTGGCCTTCCGCGTGGT
CTTGCCACTCCTGCATCTGGGCTGGATCCGACAGGCTATTTTACAGCGCA
TGTCCAAGGACGATTTTCTGGTCTTGTGCCACACCCACGAAAAGCAGATC
GCGATCTGCTCCTGGCTCCTCGACACCATGCTGCCCTGTTTCGCGCTCTT
TGCGGGCGTACCTCGTCGTCAGATGAACCTTGGCTTCGGCCGGGAAAACT
TCAGCGTGATCGTCAACCACGTCTTGTTCAATACTGACCTGGTACATGAC
AACTACTTTTACCTGGGGTACATCCTGGGAGAGTACACGGAAGAGTGCTG
CCCGCGGTATTTAAAGGCCGAGAACTTCGCTGCCATGAAGAAGCACCTCC
TGGCTGGCAAGCTCCATCTCTTCCACGGGTCCATTGAACAAGCCATCATG
AAGAACGCGGCCGACGGAGACGAGCTTTTCACCGTCGCCTCCTTGCTCGA
CCACATGGACTGGATGGATAAGGGCATGGTGACGTCCGAGATCTCCCTCT
TGGTACAGCGCATGGACCAGGAACGCGGCCGCATTTACTGGCGCTCTTTC
TCGGAGAACGTTCACATCCCGCCCCTCGTCTGGATGGGGGCCCAGAAGGT
GGATGACATCTACGAGAACAGCATGGGGGACCGGGTGGGCATGTACTTCT
CCACGTGGATCGCGAACCTGAAGGACAGCGAGTTCGTGGTCACCCCTCGT
TGCCGCTCCTGGCGCAAGGACGGGGGGGCGTACCGCTCCGGCCTGGCGGC
ACAGTTGTTGACGGGCGCAAAGATTGTCACAGCCCCCGTCTGGAAGCGCG
TGGTTCAGGCCAGCAGCGGCAAGGAGAGGCTGGGCGGCAAGGCAGACAGC
AAGAACGGAGAGGGACGCACGGACAGTGCGCATGAACGAGACATGGAGGC
ATTCTACAAATTTCAAAAGGAGGGCTATGACGGCTTCCGTGAGAACTTCT
TGCATGCGCGCATGGACCTGATCCAAGCCATGCCCCTCAAGAGGAAGGGT
GGCATGGTATGGATCGACGTTGGCGGTGGCACGGCCCGCAACCTGGAGTT
CATTCCCGTCGAGATCCTGCGCAAATACTTCAAAGCCATATACGTCGTCG
ATGTATCTCCGTCCCTGCTAGGAGTCGCCCAGCAGCGTGTGGCAGCGGCT
GGCTTGACCGACTTGGTGCACCTGATCGAGCACGACTTCACGGCCCCGTC
TATCTTCAAGACCCTGCCCTTCCTGGAGGGGAAAGTCGACATGTTGACTT
TCTCCTATTCCCTCTCCATGATCCCCGACAAAACCGCCGCCCTGGTAAAC
GCCCTCCGTTTCCTCCAACCCAACGGCCATGGCGTGCTTGGTCTGGCAGA
TTTCTTCTTGGCCTCAAACGAGGATTCAGGCTTGCCCACCATGCTCGCCT
CGCTCCGGCGTATGGAAGCCACCTTCCAGCGGAAATGGTTCGAGCAGGAC
CGCGTTCACCTCATCTCTCCCGCCATTCTCAAGCGTCTGGAGAAAGCAAC
GACGTGTGTGTGGGACGAACGCTTTCGCGGCGGAGTGCCCCTCTTGCCGG
TGCTCCGCCCGTACCACGGTGCTTATGTCGCCTTGACCGGCAAATCAAAA
GCCCAGTAGATGTGCAATGTTCCTCGCGATCACATGACTATGGCTGCCAA
AGCCCGGGCCTGGCGAAATGAGAA back to top
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