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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100878g5.372.mrna |
| Orig protein id | gnl|cribi|Naga_100878g5.372 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1383241..1384901 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna557 ID=rna557|Name=rna557|organism=Nannochloropsis gaditana|type=mRNA|length=3206bp
CGCAGAGCAACATTGTACGCATATCACTACCATGAAAAGCGGGTAGGAAG
GGTTCAAGGAGGGAAAAAGAAGGAAAAGAAGCTCTTCAAGGTCTCCAAAA
CGGCGACATGTGGAGCATTGTTCCTCCTAGAGGGACTTGCACGGTGTCAA
GTCTGCCCTGGTGGGAAACAATGAGATGGGTGGCGGGAGGAGATGCTTTT
CCCATTTTATGTTTTTACTGATTATTACCCTGGAGCTAGAGCAGCTACGG
GAATGGAATGTCTGCAATCTCTATGGAGTACGTGGCCCTCAACAACAGGC
AATCGGGTAGTCTTAAGAAGAGGAAGCGAGGAAGGAGAAGCGGAGCTGCA
GGTCCACAAAGAGGCGTATACAGCAGTCTCGGCTATGGGCAAGTGTAAAT
GTACGCTTGGATATTTTATGATGTCCGCAGGCTTTTCGTCATGATATGCT
CGGCTTGGCGTGAAGCCCTTCGAGGCGGCGGCACAGCCATGCTGTGCGAC
AAAGTAAGGAAAGACCGAATATTATCAACCTGCCCGGGTCTCTTTATTTT
CTGTGGGATTAAAGTCTGAACTGCAAGAAGTGTGGATCGCTGTCCGAGAC
AAGTGGAGAAACTCCTACTCTTACGGAATAAAGGCATCGAGAGGGTTAAA
GATAAACGACAGCGTTGCTCCGGGCCGTATATGGAGCAGAACGCCGGAAT
GACCCAGCGACATCCGCATGGGGACGGTGTGGTCGCAGACAGGGCCGCAT
TCGAATCAAAGTACCAGTTTGTCCGGGCCATTGGAGACGGGGGCCAGGCC
GGCGTCTACGAATACCGTCGTCGCGAGGCCCCAGAGGAGCGCGTGGCAGT
GAAAGAATTTGGCAGCTTGACCTCACGGGAATGGCGCATACTGGCGGCGG
TGCGCCACCCACACATTTGTGGGCTGGTGGATGCGGCACGTTACGAGAAT
CCACGGGTCCGTACCACCAAAATTGTCGTGGATTGCATGGACATGAACCT
GCAATCCTTTTTGCAGGCGCGTCAGCGGCTGGCGGGCAAGAGGGGGAAGC
CGAGCGTGGGGGAGAACAAAGAAAACAGGAGCACAGCTTGTGTCAGTGGG
AATGACAAACAAGAGGGCAGGTGTATGGGAAAGGGGAACCTCCCATGGTT
TGACAAGGCTTTGCTACAACAACAAGAGAAGGAGCAACGTCGGTTGCATA
AAGCCAAGAAAGGCAGGGAGGGGTGGGACGAGGGGGAAGGAGAAGACTCA
AACCTGCTCAAAGCGGCGATGGACGTGGAAACGGTGCGGGAGATTTTGTA
CGCGGTGACCCTGGCCCTTGACTACCTCCACCACAAGCTGATCGTGCACT
TGGACATCAAGCTCGACAACATCCTTCTCCGCCTTGACAGCCAGGACAAG
TCATCCATCGCCCGAGACCCAGAGAGTGGTCGGCTCTCCATCAAACTGGC
GGACTTCGGCCTCGCTATGCTGCTTGGAGGGACGTCGCCCTGCCCTCCCT
CCCCCTCTCCTTCCCCTCCTCGCGCCCCCGGCTCTCCCCCCTCCCTTCCT
GACCCGGAGACGGAGCACACACCCCGCTTTGCCGCCGCGGGCACCTGTCA
CTACATGGCTCCTGAGGTCGAGTTCGATTCTCGGTTCGGGGTGCAAGCCG
ACATATTCAGTCTGGGCGTGGTCCTGCATGTCCTCTTGACGGGCGGGCGT
TTCCCCCAGACGGCCTTGGGTGAACCCGCCGTGCTTAGGGACGACGCGGA
AGGAAAAGGCACAATCCCGGAAGTGGATGGCTTGCGGAGCCTGGTTCAGG
CTATGCTACATGGAGATCCTTACCGACGGCCCCACGCGTTTCACATCCTC
GCGCATCCTTTCTTGGCCCCCGTGCGTCGAGACGGGGATACCCTGCTGGG
AGACTTGGTGGACGAATCGGAGAAAGCGGCCCGGGTGATGCTGCTTTCGA
TCCGGCGGGGACAAGGCAAAACACGCGCGTCGGGGAAGGAAAGCCGACGG
TCGGGGGTACGGGGGGGGGCGACGCCATGGAAGTGGAAGGGGAGCAAGCT
TGTCCTCCGCCCTCCCCTCCTCCTTCCTCCCCCCCACCCCCCCCGCGGGT
TCCCGCCCTCCCCACCACCCGTTCCCTCTCCCGCTCCATCCTGGCTCAGG
AACCCCCACCGTTGCCCCTGTACACCGCCTACATGGACTTGGCGGAGATC
GACGATGTTCGGGCCACCGTGGTAGTGTGTGGGCGGAAGGAAGGGATGCT
GCGGGTCAAGAAAAGCGAGGTTTCCACCTTAGGCGCCATATTGATGCGGG
AACGGGCCGGGTCGACCACAGAGCTGGGGCAAGTGATGAGGGTGGAAGGG
GAGGAAGGGGAGAGGGCAGACATGAGGATGGAGGTAGAGGCGGAGGGCGG
GAAGGAGGAAGGGGCCGCATGGCTGGGAAAGAAGGCCTGCCGTCTCCAAC
GTTTGGTGCGACGGTCGGGCCAGCCGTTTGAGTACATGCGGGACCTGTGG
GTGGCGATGGTCGGGATGGAAGGGGGGAGGATGGGTTTGACCCGGGAATC
GATCTGGAGCATCTACCAAGAACTCCGCCGGCTGGCCCCCATGCTGGCTG
CCCAAGCAGGCACGGCGTTGTACTTGCCCATGATTGGGTGTGGGAGAGGT
CAGACTGTGGGTGGTTTCGCCTCGCCCGGCCTGGTGCGACAAGCGATCAT
TCAAGAGTCGGTGGGTTTCGCGCAATTTTTGGCCCAAGCCATCCCCAGCC
CGCGCTTGGAATGCGTCGTGCTGTACACTTGGGAGAAGGACTCGATGGGC
GTGTTAATGGACTCCCTCCGCGTCTTCAAGGAGAAGTTCAGGGGCATGAT
GAGCGCCCGTTTGGACGAGGAGGAGTACGGGCGCTATGTACGGGTCCTGC
ATGCGGCGGCCGCCGCTGCCACTGCCTCCCGTCCCTCCACCTGCCCGCCT
TCCTTCCCCCCTTCCTCCCCTACAACCGGAGACGTGCCCATGTCCATTGC
CAGCTCCGTCTCCTTTTCCTCTTCCCCCCCGTCCTCCCTCCCGCCCTCCT
CTCTTCTCGCCTGTGACCTGGAGCTCGAATCACGCCTGCGTGCCTTGACA
TCCCTCGATTCCTACCCGGACGTATGCCAGGCGTGCTGGGCCCTGGGACA
ATACCTGACCACTGCGTACAGAGAGCGGTTCACGGGCGAGGATCTGGAAA
CACAAT back to topprotein sequence of rna557 >rna557-protein ID=rna557-protein|Name=rna557|organism=Nannochloropsis gaditana|type=polypeptide|length=268bp
MMFSSRVMILFAASLFLMTVPASALSGRTSTTARKVNNFNFCARPFLDSL
SFWPSSDVLEGLGNDTFALPYFFIPYSKVPDLDIYDLGVFANLMSSTFGF
SSNIVPCANAAAGDFNSTSMGTLVGSCAPIQTDVNATQIIEALLDGPLRR
LRELEVPQEKKQAHRRIQEELLDYLTTVCYCRWTAVFTAPKTKWGENTGM
SGVSIRSSVETVEDYVETSMGNLRSNKPILLSSSVEGLGDAPEAALETAY
TQYTVQYFKKGWNPFYSK back to topmRNA from alignment at CM002455.1:1383241..1384901- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna557 ID=rna557|Name=rna557|organism=Nannochloropsis gaditana|type=mRNA|length=1661bp|location=Sequence derived from alignment at CM002455.1:1383241..1384901- (Nannochloropsis gaditana)
CGAAAGCTCTGACATGTGGCAAGTGACTCGATCGTATGCTTAAGATATTT
CTGTTCCTTCTCCATACCATGCACTCTTGTAGCTTTCAGACACTCCGTCT
CACCTGGTCGCAATGATGTTCTCCTCGCGTGTGATGATACTTTTTGCGGC
GAGCCTGTTCCTGATGACTGTACCTGCCTCAGCCTTAAGCGGCCGCACCA
GCACCACTGCCCGCAAGGTCAACAATTTCAATTTTTGTGCTCGACCTTTC
TTGGATTCCTTGTCCTTCTGGCCCTCCAGCGACGTCCTTGAAGGCTTGGG
TAACGACACCTTCGCACTCCCCTATTTTTTCATTCCCTATTCCAAAGTCC
CCGACTTGGACATCTATGACTTGGGAGTCTTTGCAAACCTCGTAAGTACT
GTGTAGTCTAGACATATGAATGTAGCTGTCGTGATAGAAAGTGATTTCGT
CGCCCTATTTCTCCACACCCTGCTTGCGTGCTGAACCCCACGTAGATGAG
CAGCACGTTCGGATTTTCTTCCAACATTGTGCCCTGCGCCAATGCTGCAG
CTGGAGACTTTAACAGCACCTCAATGGGCACTCTTGTAGGCTCGTGCGCT
CCCATTCAAACGTGAGTACATCTGAGAAAAGCTTCCCGGGGCAAAGGCAC
CCTCGATCCTAAAAAACAAGAAAGGTCGTATCCATGCATCTTGAACCCTG
GTCTCTCGCTCACAGGGACGTCAATGCCACTCAAATTATTGAGGCCTTAC
TGGATGGCCCCCTTCGTCGTCTGCGAGAATTGGAGGTCCCACAAGAGAAA
AAGCAGGCGCACCGTCGCATCCAAGAAGAACTTCTCGATTACTTGACGAC
CGTCTGCTACTGCAGGTGGACGGCGGTTTTTACGGCCCCGAAAACCAAAT
GGGGAGAGAACACGGGAATGTCGGGAGTCTCTATCCGCTCCTCTGTCGAA
ACTGTCGAGGACTATGTGGAGACCAGCATGGGCAATCTCCGCAGCAACAA
ACCTATCCTCCTCTCCTCTTCCGTTGAGGGACTAGGTGACGCGCCGGAGG
CTGCCTTGGAGACGGCGTACACGCAGTACACCGTGCAGTATTTCAAGAAG
GGATGGAACCCGTTCTACAGCAAGTAAACTCTGGACATGTGTATCCTCTC
ACATTGGGCTACTATCGCTATTCTTTCACGTAAATGGGTGTCAAAAGTAC
GATTGTCATAGCGTGGCGCCGCGCGGGGTGTGCTGCTCTCTCTGGAGACG
TGTTGGCTCTCGAAGTCATCACGTGCGTATCGGAAGGGTAGCTGTGCCCG
CATTGTGTGTGTCTTGGACGGTAAAGCATATGTAGTGATTGTTGGATGAG
TAAGGTTTGTGGTATCTAGCATGAAGACAGGACTTATCTCTCATCGGCAT
TCATGGATAATCGCTTCGTGTCGTGTCTGGGAGTGCTGTCGGTCTTCCAA
GAGTAGAGGTTATCAGCGGGCTATGGCCGCCTTGTGTGTGTCTTCTGAAT
GTTGTTCGATGGGTGAGTTTGTCGTATCTGGTAAGGTTTTTTTGGCCTGC
ATCCACAGATATAGACACCATGTCGTGCCTGGGACGATCGTTGGTCTCTT
AGGAATGAAGCATTTAGCAGCAAAGTAATCGTAGCTAACGTAATGAGGGA
ACCTCGTTCTA back to topCoding sequence (CDS) from alignment at CM002455.1:1383241..1384901- >rna557 ID=rna557|Name=rna557|organism=Nannochloropsis gaditana|type=CDS|length=2421bp|location=Sequence derived from alignment at CM002455.1:1383241..1384901- (Nannochloropsis gaditana)
GGACGTCAATGCCACTCAAATTATTGAGGCCTTACTGGATGGCCCCCTTC
GTCGTCTGCGAGAATTGGAGGTCCCACAAGAGAAAAAGCAGGCGCACCGT
CGCATCCAAGAAGAACTTCTCGATTACTTGACGACCGTCTGCTACTGCAG
GTGGACGGCGGTTTTTACGGCCCCGAAAACCAAATGGGGAGAGAACACGG
GAATGTCGGGAGTCTCTATCCGCTCCTCTGTCGAAACTGTCGAGGACTAT
GTGGAGACCAGCATGGGCAATCTCCGCAGCAACAAACCTATCCTCCTCTC
CTCTTCCGTTGAGGGACTAGGTGACGCGCCGGAGGCTGCCTTGGAGACGG
CGTACACGCAGTACACCGTGCAGTATTTCAAGAAGGGATGGAACCCGTTC
TACAGCAAGTAAATGAGCAGCACGTTCGGATTTTCTTCCAACATTGTGCC
CTGCGCCAATGCTGCAGCTGGAGACTTTAACAGCACCTCAATGGGCACTC
TTGTAGGCTCGTGCGCTCCCATTCAAACATGATGTTCTCCTCGCGTGTGA
TGATACTTTTTGCGGCGAGCCTGTTCCTGATGACTGTACCTGCCTCAGCC
TTAAGCGGCCGCACCAGCACCACTGCCCGCAAGGTCAACAATTTCAATTT
TTGTGCTCGACCTTTCTTGGATTCCTTGTCCTTCTGGCCCTCCAGCGACG
TCCTTGAAGGCTTGGGTAACGACACCTTCGCACTCCCCTATTTTTTCATT
CCCTATTCCAAAGTCCCCGACTTGGACATCTATGACTTGGGAGTCTTTGC
AAACCTCGGACGTCAATGCCACTCAAATTATTGAGGCCTTACTGGATGGC
CCCCTTCGTCGTCTGCGAGAATTGGAGGTCCCACAAGAGAAAAAGCAGGC
GCACCGTCGCATCCAAGAAGAACTTCTCGATTACTTGACGACCGTCTGCT
ACTGCAGGTGGACGGCGGTTTTTACGGCCCCGAAAACCAAATGGGGAGAG
AACACGGGAATGTCGGGAGTCTCTATCCGCTCCTCTGTCGAAACTGTCGA
GGACTATGTGGAGACCAGCATGGGCAATCTCCGCAGCAACAAACCTATCC
TCCTCTCCTCTTCCGTTGAGGGACTAGGTGACGCGCCGGAGGCTGCCTTG
GAGACGGCGTACACGCAGTACACCGTGCAGTATTTCAAGAAGGGATGGAA
CCCGTTCTACAGCAAGTAAATGAGCAGCACGTTCGGATTTTCTTCCAACA
TTGTGCCCTGCGCCAATGCTGCAGCTGGAGACTTTAACAGCACCTCAATG
GGCACTCTTGTAGGCTCGTGCGCTCCCATTCAAACATGATGTTCTCCTCG
CGTGTGATGATACTTTTTGCGGCGAGCCTGTTCCTGATGACTGTACCTGC
CTCAGCCTTAAGCGGCCGCACCAGCACCACTGCCCGCAAGGTCAACAATT
TCAATTTTTGTGCTCGACCTTTCTTGGATTCCTTGTCCTTCTGGCCCTCC
AGCGACGTCCTTGAAGGCTTGGGTAACGACACCTTCGCACTCCCCTATTT
TTTCATTCCCTATTCCAAAGTCCCCGACTTGGACATCTATGACTTGGGAG
TCTTTGCAAACCTCGGACGTCAATGCCACTCAAATTATTGAGGCCTTACT
GGATGGCCCCCTTCGTCGTCTGCGAGAATTGGAGGTCCCACAAGAGAAAA
AGCAGGCGCACCGTCGCATCCAAGAAGAACTTCTCGATTACTTGACGACC
GTCTGCTACTGCAGGTGGACGGCGGTTTTTACGGCCCCGAAAACCAAATG
GGGAGAGAACACGGGAATGTCGGGAGTCTCTATCCGCTCCTCTGTCGAAA
CTGTCGAGGACTATGTGGAGACCAGCATGGGCAATCTCCGCAGCAACAAA
CCTATCCTCCTCTCCTCTTCCGTTGAGGGACTAGGTGACGCGCCGGAGGC
TGCCTTGGAGACGGCGTACACGCAGTACACCGTGCAGTATTTCAAGAAGG
GATGGAACCCGTTCTACAGCAAGTAAATGAGCAGCACGTTCGGATTTTCT
TCCAACATTGTGCCCTGCGCCAATGCTGCAGCTGGAGACTTTAACAGCAC
CTCAATGGGCACTCTTGTAGGCTCGTGCGCTCCCATTCAAACATGATGTT
CTCCTCGCGTGTGATGATACTTTTTGCGGCGAGCCTGTTCCTGATGACTG
TACCTGCCTCAGCCTTAAGCGGCCGCACCAGCACCACTGCCCGCAAGGTC
AACAATTTCAATTTTTGTGCTCGACCTTTCTTGGATTCCTTGTCCTTCTG
GCCCTCCAGCGACGTCCTTGAAGGCTTGGGTAACGACACCTTCGCACTCC
CCTATTTTTTCATTCCCTATTCCAAAGTCCCCGACTTGGACATCTATGAC
TTGGGAGTCTTTGCAAACCTC back to top
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