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Properties
| Property Name | Value |
|---|
| Product | hydroxyacylglutathione mitochondrial |
| Orig transcript id | gnl|cribi|Naga_100994g1.6015.mrna |
| Orig protein id | gnl|cribi|Naga_100994g1.6015 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1376454..1378262 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna553 ID=rna553|Name=rna553|organism=Nannochloropsis gaditana|type=mRNA|length=1131bp
TAGGCATGCACGATCGGCCGTTGCTGGTATACGCACCATCTCGAGCTCTC
TTTGTCGTCCTCACAGGATCTTTTTTGCTGTACCAAGCCCTTGGCGCCGC
CGTCTTACTTACGAGGACATATCCCTTTGGCGTCAAATATCACGATTCAA
GACCATCGTACGGTCGATCAAGCTTCGTCAACCCACCCATGTTATCGTCG
CTCCGTCCATTGCTGCACAGTGTGACAGGCATGGGGACGCTCGCGGCAGC
CGGAACCTCCTCCCCCCCGGCCTCCTCATGCTCCACCACTCCCGCCCTGC
CCCCTTGCGCCCGTGTCATCCCCGTTCCTATTCTCAGCGACAATTTTGCT
TACTTGGTTGTGGACCCTCAAACCGGAAAAGCTGCGTGTGTCGATCCTGC
CGAGCCAGCGAAGGTCCTGGCGGCCGCCCAACGCGAAGGCATTAAGCTGT
CCACCCTCCTTTGCACGCACAAACACTGGGATCACGCAGGCGGTAACGAA
GAAATGGCGCGCATGCTGCCCGGTTTGGAGGTGGTGACGACCAAGTTTGA
GGACATCCCTGCCGCCACCATCCGCTTGGGCGACGACGATGTCTACACGC
TTGGATCCCTGAGCGTGCGTGCTCTCTACACACCCTGCCACACCAAAGGC
CACGTGCTGTTTCTCGTGACGCCACAGGACGAGGCAGGGCCGGGGACGAG
CCCGACGGCCCCTGTCCTTTTCTCGGGCGACACATTGTTCGTGGGAGGCT
GCGGCCGGTTTTTCGAAGGCGACGGCGCGCAGATGGTGGAGGCGCTTATG
GGCCGCGTTGCCAGCCTCTCCCCCGAGACCCTGGTCTATTGCGGGCACGA
ATATACCCAATCCAACCTGGCCTTTGCCATGTCGGTGGAGCCTGAAAATG
CTGCCCTTCGCGCCAAAATCGCTGTTGCCACGGCTGCCCTGCGCTCAGGA
CAGCCGACCGTCCCCTCCACGGTAGGGAGCGAGCTGGAGATTAACCCCTT
CATGCGTGTGGGGGAGGCCGCGGTGATAAAGGCCGCGAGGGAGAAAGGGG
GGGCGGCGGGGGAGGATCCAGTCAGTGTGATGACGGCATTGCGGGAAATG
AAGAATATTTTCAAAGGTTGATGGGGGAGGG back to topprotein sequence of rna553 >rna553-protein ID=rna553-protein|Name=rna553|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
MHDRPLLVYAPSRALFVVLTGSFLLYQALGAAVLLTRTYPFGVKYHDSRP
SYGRSSFVNPPMLSSLRPLLHSGQILSGSIKRSLLRSLKRSPFHRPGLTG
LIVTGMGTLAAAGTSSPPASSCSTTPALPPCARVIPVPILSDNFAYLVVD
PQTGKAACVDPAEPAKVLAAAQREGIKLSTLLCTHKHWDHAGGNEEMARM
LPGLEVVTTKFEDIPAATIRLGDDDVYTLGSLSVRALYTPCHTKGHVLFL
VTPQDEAGPGTSPTAPVLFSGDTLFVGGCGRFFEGDGAQMVEALMGRVAS
LSPETLVYCGHEYTQSNLAFAMSVEPENAALRAKIAVATAALRSGQPTVP
STVGSELEINPFMRVGEAAVIKAAREKGGAAGEDPVSVMTALREMKNIFK
G back to topmRNA from alignment at CM002455.1:1376454..1378262+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna553 ID=rna553|Name=rna553|organism=Nannochloropsis gaditana|type=mRNA|length=1809bp|location=Sequence derived from alignment at CM002455.1:1376454..1378262+ (Nannochloropsis gaditana)
GGCATGCACGATCGGCCGTTGCTGGTATACGCACCATCTCGAGCTCTCTT
TGTCGTCCTCACAGGATCTTTTTTGCTGTACCAAGCCCTTGGCGCCGCCG
TCTTACTTACGAGGACATATCCCTTTGGCGTCAAATATCACGATTCAAGA
CCATCGTACGGTCGATCAAGCTTCGTCAACCCACCCATGTTATCGTCGCT
CCGTCCATTGCTGCACAGTGGTACGTTCTTTGATGACCCTGCATGTGAGA
CGACAGGCATGGGGAGGTTAATCCGGAAGGTCATATATTTTCTGATTTTG
ACGCAACCACCCCACTTTCTCGTAGGACAAATTTTGTCCGGCTCTATTAA
ACGTAGTCTATTGCGATCGTTAAAACGCTCCCCCTTTCACCGGCCCGGCT
TGACCGGCCTGATAGTGACAGGCATGGGGACGCTCGCGGCAGCcggaacc
tcctcccccccggcctcctcaTGCTCCACcactcccgccctgcccccttg
CGCCCGTGTCATCCCCGTTCCTATTCTCAGCGACAATTTTGCTTACTTGG
TTGTGGACCCTCAAACCGGAAAAGCTGCGTGTGTCGATCCTGCCGAGCCA
GCGAAGGTCCTGGCGGCCGCCCAACGCGAAGGCATTAAGCTGTCCACCCT
CCTTTGCACGCACAAACACTGGGATCACGCAGGCGGTAACGAAGAAATGG
CGCGCATGCTGCCCGGTttggaggtggtgacgacCAAGTTTGAGGACATC
CCTGCCGCCACCATCCGCTTGGGCGACGACGATGTCTACACGCTTGGATC
CCTGAGCGTGCGTGCTCTCTACACACCCTGCCACACCAAAGGCCACGTGC
TGTTTCTCGTGACGCCacaggacgaggcagggcCGGGGACGAGCCCGACG
GCCCCTGTCCTTTTCTCGGGCGACACATTGTTCGTGGGAGGCTGCGGCCG
GTTTTTCGAAGGCGACGGCGCGcagatggtggaggcgctTATGGGCCGCG
TTGCCAGCCTCTCCCCCGAGACCCTGGTCTATTGCGGGTACGTCTTGCTA
ACACGGTgtttggaggaggaacaggggaTGTTGTGGCCCCGAGACGGGGG
TGTATTCGTTGGCTTGAGATAAGGCGGATGCCAGTATGTGGGTGGGGCGG
TCCTCTGTTAGCACACGAAACGACCCGATCGTCCCGGGCGCGTGCTGGAG
AGcagaggcagaggagaagaaagggtggcggagggtggaaggggctCATA
CCGAGTGAGAGAgccgagagagagagagaagccGTCGTGGGCGCATTGGT
TGATCTGTGGGACTGGATGGGGGGTGGGATGTgcatgggggggggcgacg
aaAGAGCGACCCTGGCAACGTCCAGCTTTCTCCCGTCGCATTGCGTCTCA
CCCTTTCCTTGGGCCGCAAAGGATGAGGGActtggcctccctctctcact
cccgccctccctcccgcccttccccccggcccctgtaCTCCAACACCCCC
GatatttccccctccctcacaggCACGAATATACCCAATCCAACCTGGCC
TTTGCCATGTCGGTGGAGCCTGAAAATGCTGcccttcgcgccaaaatcgC
TGTTGCCACGGCTGCCCTGCGCTCAGGACAGCCGACCGTCCCCTCCACGG
TAGGGAGCGAGCTGGAGATTAACCCCTTCATGCgtgtgggggaggccgcG
GTGATAAAGgccgcgagggagaaagggggggcggcgggggaggatcCAGT
CAGTGTGATGACGGCATTGCGGGAAATGAAGAATATTTTCAAAGGTTGAT
GGGGGAGGG back to topCoding sequence (CDS) from alignment at CM002455.1:1376454..1378262+ >rna553 ID=rna553|Name=rna553|organism=Nannochloropsis gaditana|type=CDS|length=3618bp|location=Sequence derived from alignment at CM002455.1:1376454..1378262+ (Nannochloropsis gaditana)
ATGCACGATCGGCCGTTGCTGGTATACGCACCATCTCGAGCTCTCTTTGT
CGTCCTCACAGGATCTTTTTTGCTGTACCAAGCCCTTGGCGCCGCCGTCT
TACTTACGAGGACATATCCCTTTGGCGTCAAATATCACGATTCAAGACCA
TCGTACGGTCGATCAAGCTTCGTCAACCCACCCATGTTATCGTCGCTCCG
TCCATTGCTGCACAGTGGACAAATTTTGTCCGGCTCTATTAAACGTAGTC
TATTGCGATCGTTAAAACGCTCCCCCTTTCACCGGCCCGGCTTGACCGGC
CTGATAGTGACAGGCATGGGGACGCTCGCGGCAGCcggaacctcctcccc
cccggcctcctcaTGCTCCACcactcccgccctgcccccttgCGCCCGTG
TCATCCCCGTTCCTATTCTCAGCGACAATTTTGCTTACTTGGTTGTGGAC
CCTCAAACCGGAAAAGCTGCGTGTGTCGATCCTGCCGAGCCAGCGAAGGT
CCTGGCGGCCGCCCAACGCGAAGGCATTAAGCTGTCCACCCTCCTTTGCA
CGCACAAACACTGGGATCACGCAGGCGGTAACGAAGAAATGGCGCGCATG
CTGCCCGGTttggaggtggtgacgacCAAGTTTGAGGACATCCCTGCCGC
CACCATCCGCTTGGGCGACGACGATGTCTACACGCTTGGATCCCTGAGCG
TGCGTGCTCTCTACACACCCTGCCACACCAAAGGCCACGTGCTGTTTCTC
GTGACGCCacaggacgaggcagggcCGGGGACGAGCCCGACGGCCCCTGT
CCTTTTCTCGGGCGACACATTGTTCGTGGGAGGCTGCGGCCGGTTTTTCG
AAGGCGACGGCGCGcagatggtggaggcgctTATGGGCCGCGTTGCCAGC
CTCTCCCCCGAGACCCTGGTCTATTGCGGgCACGAATATACCCAATCCAA
CCTGGCCTTTGCCATGTCGGTGGAGCCTGAAAATGCTGcccttcgcgcca
aaatcgCTGTTGCCACGGCTGCCCTGCGCTCAGGACAGCCGACCGTCCCC
TCCACGGTAGGGAGCGAGCTGGAGATTAACCCCTTCATGCgtgtggggga
ggccgcGGTGATAAAGgccgcgagggagaaagggggggcggcgggggagg
atcCAGTCAGTGTGATGACGGCATTGCGGGAAATGAAGAATATTTTCAAA
GGTTGAATGCACGATCGGCCGTTGCTGGTATACGCACCATCTCGAGCTCT
CTTTGTCGTCCTCACAGGATCTTTTTTGCTGTACCAAGCCCTTGGCGCCG
CCGTCTTACTTACGAGGACATATCCCTTTGGCGTCAAATATCACGATTCA
AGACCATCGTACGGTCGATCAAGCTTCGTCAACCCACCCATGTTATCGTC
GCTCCGTCCATTGCTGCACAGTGGACAAATTTTGTCCGGCTCTATTAAAC
GTAGTCTATTGCGATCGTTAAAACGCTCCCCCTTTCACCGGCCCGGCTTG
ACCGGCCTGATAGTGACAGGCATGGGGACGCTCGCGGCAGCcggaacctc
ctcccccccggcctcctcaTGCTCCACcactcccgccctgcccccttgCG
CCCGTGTCATCCCCGTTCCTATTCTCAGCGACAATTTTGCTTACTTGGTT
GTGGACCCTCAAACCGGAAAAGCTGCGTGTGTCGATCCTGCCGAGCCAGC
GAAGGTCCTGGCGGCCGCCCAACGCGAAGGCATTAAGCTGTCCACCCTCC
TTTGCACGCACAAACACTGGGATCACGCAGGCGGTAACGAAGAAATGGCG
CGCATGCTGCCCGGTttggaggtggtgacgacCAAGTTTGAGGACATCCC
TGCCGCCACCATCCGCTTGGGCGACGACGATGTCTACACGCTTGGATCCC
TGAGCGTGCGTGCTCTCTACACACCCTGCCACACCAAAGGCCACGTGCTG
TTTCTCGTGACGCCacaggacgaggcagggcCGGGGACGAGCCCGACGGC
CCCTGTCCTTTTCTCGGGCGACACATTGTTCGTGGGAGGCTGCGGCCGGT
TTTTCGAAGGCGACGGCGCGcagatggtggaggcgctTATGGGCCGCGTT
GCCAGCCTCTCCCCCGAGACCCTGGTCTATTGCGGgCACGAATATACCCA
ATCCAACCTGGCCTTTGCCATGTCGGTGGAGCCTGAAAATGCTGcccttc
gcgccaaaatcgCTGTTGCCACGGCTGCCCTGCGCTCAGGACAGCCGACC
GTCCCCTCCACGGTAGGGAGCGAGCTGGAGATTAACCCCTTCATGCgtgt
gggggaggccgcGGTGATAAAGgccgcgagggagaaagggggggcggcgg
gggaggatcCAGTCAGTGTGATGACGGCATTGCGGGAAATGAAGAATATT
TTCAAAGGTTGAATGCACGATCGGCCGTTGCTGGTATACGCACCATCTCG
AGCTCTCTTTGTCGTCCTCACAGGATCTTTTTTGCTGTACCAAGCCCTTG
GCGCCGCCGTCTTACTTACGAGGACATATCCCTTTGGCGTCAAATATCAC
GATTCAAGACCATCGTACGGTCGATCAAGCTTCGTCAACCCACCCATGTT
ATCGTCGCTCCGTCCATTGCTGCACAGTGGACAAATTTTGTCCGGCTCTA
TTAAACGTAGTCTATTGCGATCGTTAAAACGCTCCCCCTTTCACCGGCCC
GGCTTGACCGGCCTGATAGTGACAGGCATGGGGACGCTCGCGGCAGCcgg
aacctcctcccccccggcctcctcaTGCTCCACcactcccgccctgcccc
cttgCGCCCGTGTCATCCCCGTTCCTATTCTCAGCGACAATTTTGCTTAC
TTGGTTGTGGACCCTCAAACCGGAAAAGCTGCGTGTGTCGATCCTGCCGA
GCCAGCGAAGGTCCTGGCGGCCGCCCAACGCGAAGGCATTAAGCTGTCCA
CCCTCCTTTGCACGCACAAACACTGGGATCACGCAGGCGGTAACGAAGAA
ATGGCGCGCATGCTGCCCGGTttggaggtggtgacgacCAAGTTTGAGGA
CATCCCTGCCGCCACCATCCGCTTGGGCGACGACGATGTCTACACGCTTG
GATCCCTGAGCGTGCGTGCTCTCTACACACCCTGCCACACCAAAGGCCAC
GTGCTGTTTCTCGTGACGCCacaggacgaggcagggcCGGGGACGAGCCC
GACGGCCCCTGTCCTTTTCTCGGGCGACACATTGTTCGTGGGAGGCTGCG
GCCGGTTTTTCGAAGGCGACGGCGCGcagatggtggaggcgctTATGGGC
CGCGTTGCCAGCCTCTCCCCCGAGACCCTGGTCTATTGCGGgCACGAATA
TACCCAATCCAACCTGGCCTTTGCCATGTCGGTGGAGCCTGAAAATGCTG
cccttcgcgccaaaatcgCTGTTGCCACGGCTGCCCTGCGCTCAGGACAG
CCGACCGTCCCCTCCACGGTAGGGAGCGAGCTGGAGATTAACCCCTTCAT
GCgtgtgggggaggccgcGGTGATAAAGgccgcgagggagaaaggggggg
cggcgggggaggatcCAGTCAGTGTGATGACGGCATTGCGGGAAATGAAG
AATATTTTCAAAGGTTGA back to top
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