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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101263g1.1215.mrna |
| Orig protein id | gnl|cribi|Naga_101263g1.1215 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:193956..195611 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5523 ID=rna5523|Name=rna5523|organism=Nannochloropsis gaditana|type=mRNA|length=1460bp
TCGCCGACGTTGTTGGGGCCGAGCCCCTCCTACCCTCCCGAGAGCCACAG
CCGCAGCAGCAGCAGTGGCACTTTCCACAAGACGGTGCCTGCGACGGGGG
CGTCTCTTCCCCTCGGGACCTGCCCTGCGAGTTCTTCCAAGTTGGAGCAT
TTGGTCATTCCCGCCTGCCTACAGTCTCCCCCCGCCCCCACCCCGCTCTC
CCCCGCGCGCCTGCCCCTCCGAGAGATGTACGCTTTCCTCCGCCAGCGGG
AACTGAGCTGGTTGCGCTCGCTTCCTCCCCCTTACCAAGCGGCCTTGGAC
CATGGGCACAGCGGGCAATCCTTCTGCGCGCACCACCTCACCCACTCGGG
CCGTCTCCTCCTCTGCTTGCTCAATCTGGCCCCCTGTGTGCCGATCCCCT
CTCACGAGATGTGGAAAGAGGACCAGGCGTCGGCCCTGCAGTCCTCATAT
ACGGAGGAACTGGCTTTCTTCGTCCTCAAACCGTGGATGGAGAAATTCGG
CCTGGGCGAGGAGGGCTTCAGGCTGAGTGCCCTTCCCAGGGTAAGGGAAG
GGAAGGAGGGAGAGGGAGAAAAAGAGAGGATGGAAGGGGGATGGTGCTTC
TGGAACGTGAAGCATCCAAAGGCCAATTTGGTCGCAACTCTGGTACTAGG
AGAAGAGGGCAAAGCGGAGGGTACGATGGAGGAAGCGCTGGGCTTGCCTA
CCCTCCCTCCCTCCGCCGTTTCCTCCCGAGAAACGGTTGACTGTCTATAT
AACGCCACAGATGTGGGCCCGTATGCGCATCCAGAATATCCGCGCTTGCA
TATCTGCTGCGTGCCCCTCCTCACCTTCTCATGCCATCCCACCACGGCCG
AGGCCACGGGGGCGCACTTTCGGAAGTGCGCCGACGCCTGTTGGTCCCTC
TTGGGGCTGAAGCTCTCCCTGGACATCGGCTTCTGTCAACGCTGGGAGAC
GCGTGCCCTAGCATCCCTGCTCGCGGTCGCTTTCCCACAGCTTGCGGAAG
ATCCGATGGCGCTCGATAAACTGATGGGAGAGGAGCGGAGGGCCAGGGGA
AGGAGAGAGGGCGCAGAGATAGAGGTTTGGGGTTGGCTACGGGATAAGGT
GCCTGTAATTGTAGCCGAGATAAGAAATATGAAGACAGAGGGGGGAGGAA
AGGATCAAGGCAAAGGGAAAAAGGAGGGATCCATCATGGTATTACCATGA
CAGGTTTTGCTTGCAAGGGTGAGAAGAATGGATGGGATGGAGGGATGGGG
AGGGCGCAATGAAGATGCGAAGGGAGAGGAACGCCTGGGTCGTGCAAGTA
CGCGGAACGAGGACACATCTTGCAATAAGAACGTTCATTGTAGACGTTGA
TATTTATAAATGGACCACGGATTAAATCGGGCCAGCACATGCCTATGGTT
CCACAAAAGTGTTCAAATAACGACGTGTAAAGAAACAAACAATTGAAGAG
GATGGCACAC back to topprotein sequence of rna5523 >rna5523-protein ID=rna5523-protein|Name=rna5523|organism=Nannochloropsis gaditana|type=polypeptide|length=334bp
QLPPSRGENLRVLVKHLVERHKETLEALGKDFPTFRGLLERAERNREFDE
QALAVASGSGVEGEEGGDGKGKGRKRRAGGGEEEDEAYFNEDEEEEEDGG
GERTGLPTASGGRPADALSACDVSQDGEDAFPGASTSAPSPAPSLPPLRL
VNYDDDEEEDVDPFWLGKGAAAVRKGQQGLQEEKPGLGRGNGGGGGGALA
RFGERKIVFNVLSTSLGKRVEEGEEEEEEEREEEEGESRRRKAAASVIGD
IFEDPSLMGGGQGEAGRASGTGAGTEVGRDGQGQEEHGEEPASEEGDEAG
SGAIKKLKSGEGDSPGASRSSSVPAPPSPSSTSS back to topmRNA from alignment at CM002466.1:193956..195611- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5523 ID=rna5523|Name=rna5523|organism=Nannochloropsis gaditana|type=mRNA|length=1656bp|location=Sequence derived from alignment at CM002466.1:193956..195611- (Nannochloropsis gaditana)
CCAACTCCCTCCCTCTAGGGGAGAGAACCTCAGGGTGCTGGTCAAGCACT
TGGTCGAGAGACACAAGGAGACGCTGGAGGCGTTGGGGAAGGATTTTCCC
ACCTTCCGCGGGCTTCTGGAACGCGCAGAGAGGAACAGGGAGTTCGACGA
GCAGGCCCTGGCAGTCGCCTCAGGTTCCGGCGTGGAGGGCGAGGAGGGCG
GGGACGGGAAGGGAAAAGGGAGGAAGCGAAGGGCGGGGGGGGGAGAGGAG
GAGGACGAGGCCTACTTCAACGAGGACGAGGAGGAAGAAGAGGACGGGGG
GGGGGAGAGGACAGGGCTCCCGACCGCCTCGGGAGGGCGCCCCGCGGATG
CCCTCTCAGCCTGTGACGTCTCCCAGGACGGAGAAGACGCTTTTCCCGGC
GCCTCAACCTCTGCGCCCTCTCCCGCCCCGTCCCTGCCGCCCTTGCGCCT
GGTCAATTACGACGACGATGAGGAGGAGGACGTGGATCCCTTCTGGCTGG
GGAAAGGAGCCGCGGCGGTCCGGAAGGGGCAGCAGGGGCTCCAGGAGGAG
AAGCCAGGACTTGGCCGGGGGAATGGGGGAGGGGGAGGGGGAGCCTTGGC
CCGCTTCGGAGAGCGAAAAATCGTGTTTAACGTGCTGTCGACCTCGTTGG
GAAAGCGGGTCGAGGAGGGAGAGGAGGAGGAGGAGGAGGAGAGGGAGGAG
GAAGAGGGAGAGAGCCGGCGAAGGAAAGCGGCGGCATCCGTGATCGGCGA
CATCTTCGAGGACCCTTCGCTGATGGGCGGAGGACAAGGCGAGGCAGGGC
GGGCGTCCGGGACGGGAGCAGGAACAGAGGTGGGGCGGGACGGGCAGGGT
CAGGAGGAGCACGGGGAGGAGCCGGCCTCTGAGGAGGGCGACGAAGCCGG
CAGTGGCGCGATCAAAAAGCTGAAGAGCGGCGAAGGGGACTCTCCCGGCG
CTTCTCGCTCCTCGTCCGTCCCCGCTCCCCCCTCCCCGTCTTCCACGTCC
TCCTGACCGTGATCTCGGCATCCGACGCCTTCGGCCTGGGAGCATCCCCA
GATTTTCCACGGAAGGCGGCACCGCACCCTTTTCCTCCTCTCCTTCCCCC
TCGCATACACCTCTTGTTCCCACGAACGTGCTGGCGCCCTGATGGATGGT
GGTCTCCGCGAGCCGAAAGGCATACTGCTTTGATTTGTCTCATTCAATCA
GATCGTGGCAGCGTCGCTGACGTGGAAAATGAGGCTGACACATAGAGGTA
TGAGCCCGGAGAACTCGGTCGTGAATAGGCTGACGCAGGAGAGAAACGTG
CTGTTCACCGGCACCGCGTTTCCAAGCGCCTGGCCGGGAGGTGTCGAAGT
AGAGTGGAGCGCACGCCACGACAGAGGCGGCGGGGGAGGACTAGGGGGCA
GAGAGGGGGAAGAGGGCGCATCCATATAAAGCGGGGAAGTCTGTTGTCGC
CAACCTAGACAGAGGAGGTGGACAGACGGTAAAGGCGGGAGTAGCTGCCA
TATTTGGCATTAACAATGAGGAAAGACTAAGAGCTTGTGTGTGTGTGTGC
CATCCTCTTCAATTGTTTGTTTCTTTACACGTCGTTATTTGAACACTTTT
GTGGAACCATAGGCATGTGCTGGCCCGATTTAATCCGTGGTCCATTTATA
AATATC back to topCoding sequence (CDS) from alignment at CM002466.1:193956..195611- >rna5523 ID=rna5523|Name=rna5523|organism=Nannochloropsis gaditana|type=CDS|length=1005bp|location=Sequence derived from alignment at CM002466.1:193956..195611- (Nannochloropsis gaditana)
CAACTCCCTCCCTCTAGGGGAGAGAACCTCAGGGTGCTGGTCAAGCACTT
GGTCGAGAGACACAAGGAGACGCTGGAGGCGTTGGGGAAGGATTTTCCCA
CCTTCCGCGGGCTTCTGGAACGCGCAGAGAGGAACAGGGAGTTCGACGAG
CAGGCCCTGGCAGTCGCCTCAGGTTCCGGCGTGGAGGGCGAGGAGGGCGG
GGACGGGAAGGGAAAAGGGAGGAAGCGAAGGGCGGGGGGGGGAGAGGAGG
AGGACGAGGCCTACTTCAACGAGGACGAGGAGGAAGAAGAGGACGGGGGG
GGGGAGAGGACAGGGCTCCCGACCGCCTCGGGAGGGCGCCCCGCGGATGC
CCTCTCAGCCTGTGACGTCTCCCAGGACGGAGAAGACGCTTTTCCCGGCG
CCTCAACCTCTGCGCCCTCTCCCGCCCCGTCCCTGCCGCCCTTGCGCCTG
GTCAATTACGACGACGATGAGGAGGAGGACGTGGATCCCTTCTGGCTGGG
GAAAGGAGCCGCGGCGGTCCGGAAGGGGCAGCAGGGGCTCCAGGAGGAGA
AGCCAGGACTTGGCCGGGGGAATGGGGGAGGGGGAGGGGGAGCCTTGGCC
CGCTTCGGAGAGCGAAAAATCGTGTTTAACGTGCTGTCGACCTCGTTGGG
AAAGCGGGTCGAGGAGGGAGAGGAGGAGGAGGAGGAGGAGAGGGAGGAGG
AAGAGGGAGAGAGCCGGCGAAGGAAAGCGGCGGCATCCGTGATCGGCGAC
ATCTTCGAGGACCCTTCGCTGATGGGCGGAGGACAAGGCGAGGCAGGGCG
GGCGTCCGGGACGGGAGCAGGAACAGAGGTGGGGCGGGACGGGCAGGGTC
AGGAGGAGCACGGGGAGGAGCCGGCCTCTGAGGAGGGCGACGAAGCCGGC
AGTGGCGCGATCAAAAAGCTGAAGAGCGGCGAAGGGGACTCTCCCGGCGC
TTCTCGCTCCTCGTCCGTCCCCGCTCCCCCCTCCCCGTCTTCCACGTCCT
CCTGA back to top
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