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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100490g1.5291.mrna |
| Orig protein id | gnl|cribi|Naga_100490g1.5291 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:180990..182313 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5517 ID=rna5517|Name=rna5517|organism=Nannochloropsis gaditana|type=mRNA|length=3886bp
ACGCGTCTATTCGCACATTACCGTCACGACAGCTTTCGCGTGTGATGGCT
TGATAGCTCGATGGCCGGGAGTGGTGTCGTTTGGTCGGACCATCTTTGAG
GTGGAATTTTTGCTCTTGTCGGTAGTCTCTTGGGCTTCCCAGCACTGAAA
GACACTGTAATTCGTCCAACTTTTCGCTATGATGGTGTTGCCCCTTCATG
GCACTTTTCTGCTAGTCATAAAATTGTTGCTGCTTCATTCAGTACTACTA
GTCCGGTGTCTGGCAAGTGAGCCCCCAATTTTCTGCGACCCCGAGGTCCT
CGCCGTATGTCCCCACGACACGTTCATCCCCTACGAGGAGTTCTCCGTTT
CCTTCCCCGTGATCGAATACTGCATCCGGCCAAACAATGAAGGCTTTATC
CCTGTCACCCGGGACACATGCGAATCTTTTGTACGTGGTACCTGGACTGT
GCGCCCTGAATGGGCCGCACGCCGCGCGTCACATACGCTGCAGGAGCAAT
ACAGGTGCACGGTATGTCAAGCTTACAACGCCTCAGCGCTCGTCGCGGAC
AAAGCTGGCGTCTGGATTTTTACCCTCCATAACACGGGCAGCTACTCGAC
CAAGACCTTCAAACACTGGGGCTCTCTCTTGGGGGACGTGAGTCTAAACC
AGCTGGTCGTCTCAGGGACAGGGAAACGCTATTTGTTCGCCCTGGCCTCC
TACGCCTCGGCCATGAAGCTTTTGAACGCGTCAAGCAATGTCCTGGCCGC
ACAGCCTATGCCTGAAGAGCTGAAGATCTCCCCGCGCGTGGTCGACCGTG
CGTCGGTAATCGCTTCCTCTGTTCCCTCCCCGTCGCAGTCGGACGGAAGG
GGAGAGACCTCGACTCTGGCCATTTACTCCTTGATCAGCAGCCACACAGA
CACCATTCTTCGAGCCTCGTACCACGATGACGCGCTTCGTGCCATCCACG
AGGCCCTCGGGCTTCCTCTCTCCCCCGAGACGGCGGCCCGCGTGCCTCCC
TTGCCCCAGGCAGCCCCCCCCCAAGAGGTCGGCATAGTGGTCACTCATTC
GAACGCCGGGGTTGGGGGCAGCTCTCCAGGCGGCGGCTGCAACGATTGCA
CGGTAGAAACGACGGGCCACGGGAGCTACCTGGTCTCCAAGGTGCCGGTG
CAGGTGACGGCCGAGGTCGCGGCTAACGTGTCGCGGGCGCTCGCCTCGGC
TTTTGTCATCGACCTGGCCGTGCCGTTCTCGCTTTTCAACAAAGAGGCCG
CCTACCTGCTCCAGTCAGGGACGAACAGCACGAGCCTGGGGGTGGATGGG
AAGCGGGGGAGCACCTGGCTGTGGGACCAGGGGCTGACGGGGGAGGGCGA
GGTGGTGGGGTTGGCCGACACGGGCTTGGACGTTGCCAGCTGTTTTTTCC
ACGACTCGGAGCACCCCATCACCTTCGAACCGGTCTACGACCCGGACACA
GGCGCTGTCGTGCCCACTTACCAGAGCGCGGAGCATCGGAAGGTCCGGGA
GTACTTCGCCTACGCCGATGGAGGGGAAGGGGTTCTCTCCGGCCACGGGA
CGCACGTGGCAGGGTCCGCGGTAGGATACCCGGCGGAGATGGCTCCGACC
AGCAAAGGCTTCAAATTCCGGGGGGCGGCATGGGCAGCTAAACTCGCCTT
CTTTGACATCGGTCTTCCCCACGACACCTTTCTCTACCTCCCCCCCGACC
TCGCCACCGGCCTGTTCCCCCGCACCTACAACCTGGGCGGGCGCATCCAC
TGCAACTCCTGGGGGTCCAGCATCTCCGACAACAGCGCGGAGATGCGACA
GACGGACGCTTACTTGTGGGAGCACCAAGACTTCCTCATCCTCTACGCCT
CTGGGAACGGTGGTTCCCGGGCGGGGACGATTGGGACGCCTGCTTTGAGC
AAGAATTCGGTGGCTGTGGGCGCCACCACCAACAATGTGGACCGGCCAGA
CGTGGCCTTCTTCTCCTCGCGAGGACCCACCTTTGACATGCGCTTCGGGA
TCGATGTCTGTGCTCCTGGGTACTACGTGGCCAGCGCCTATTCCCAGGCG
GACAGCCCTCCGAACCAGTGTTACATTCAGGGGGTGGCGGGCACCAGCAT
GGCCACTCCCCACGTGGCTGGGACCGCGGCCCTCTTGCGCGGGTACTTTG
TGCGGGGCTTCTACCCTTTGGGCTGGCCAAGCGCTGCCCACGCCTTTGTG
CCCATGGGCGCCCTCTTGAAGGCCATGCTGATCAATTCCGCCCTGCCCAT
GACCGGTCCGGAGGCAACCAAGCACAACACGCGATTCATCCAATACCCCA
ACTACGATCAGGGCTACGGGTTGGTGGCTGCCAAGTTCGTCACCTACTTC
CAGGGGAGCGAGAACCCCAACGTCCTCTTCGTGGACGGGGCTTGGGAGGG
AGATGCAGAGGGGAAAGGCTGTGTCTCCTGCCCGCAGCTCAGCCAGGGCC
AGTCTGCGCGTTACGAGGTCGTTCCCACCTCGACTGCCACCCTCAAGGTG
ACCCTGGCATGGTACGACCACCCAGCCGCCGTGACCGTTTCCAGTCGGAC
TTTGATTAACGACCTGGATCTCACGGCCACCCAAGGGGACGGTAGCCGTT
ACTTCGCCAACGGCTGGACCTCCACGGCCGGGCCCAATTCCATTAACAAC
GTGGAGCAGCTGGTGATTCCCGACCCCTTGGTGGGCGTGCCCGTCTCCAT
CCAGGTCGTCGGCGCCTCCGTGGCCGCGGGGCCCCAGCCCTATGCCTTGG
TCATCACGGGCCAGTTCGAAAAAAGCCCGCAGCTGTTTCCCAATGCCGTC
CCGAAGGTCCTGTCCGTTGCCACGGATGGGAAGCAGGGGCTCTTGGTCGG
GCGAAATCTGCCTCGTGCGTCAGAGCACCCGCAGAGCTACACATGGAGCT
GTGTGAGTGACCCGGCCGTGCAGCTTGGCGCCCAAGTGCTCAGGTACTCC
CCGGAAACCGCCGAATTCCTGGCCGTGGTCTTCAACACCACGGCCTGCTC
CACTTTCACGGTGGCCATCACCTCCGATGGCTTCGAGGGAAACGCGAGCG
GGCCGTTCAACTACACCGAGAGGGCGGTCACCACCTTCTGCACGGCCGTC
GCTTCCGACGACACGTGTTGGGGCCTGACTGCCTGCGCCGGCCAATGCCT
CCAGACGGAACAAGTCGAGGGAGGGCGGACCACGGACGTCACCGACAGGA
CCTCCGTGCTGGTGGTGGTCGTCGTCCTCAGCCTATTGCTCGCCTGCTGC
GGCGGGCTTGTCTGGATGCGCAAGCATTGTCGGGACGAGGAGGAAGAGGA
CCTGTGGGAAACTACGGCCCCTCCGGCCGCCGCGTCTCCTCGCCCGCGGA
GGTCCAACAGGCTGGGAAAAAGGCCGCCGGCCTCGGTGGCGCCCATTGCT
TCCCCTGGAAAACCATCCAAGCACGGGAGGTAGCCCGCTTTCCCACACGC
CTCGCAGCACGAGCCCTCTAGCCCCTTGGCACGATTTTTCACGCGATTAA
AATACTGCGGGAGCGGCCCTTTTCTCATCGTGTCTAGGACCCTCGTCATC
TCCTTGGTCAAGTGGGAGGGAAGGGGCTAACCCCAGCCTCTATTTGTTTG
CATCTCTTCAGTAATGCAGCACCAGCTACAAGTCATTGTGGGCGTCTCTG
TCCTTGTGTGTCATACTCTGCGCCGTCCCGTGTGCATGGTGGGGGAAAGA
TTCATGAGGCTTGCATGTTATTACGCGTGATTGGACTCGTCTTTTTTTAT
GAACCTTACAACCACGCATAACAATTAGGATTCAGCAAACTGCTTTTAAA
CCAACACAAGAGACCAACCGGTCCAAGAAGATGCATCTACATTCTTTTTC
AGCTTTATGTTGCTCCATTTCCTTTCGACATTTCCG back to topprotein sequence of rna5517 >rna5517-protein ID=rna5517-protein|Name=rna5517|organism=Nannochloropsis gaditana|type=polypeptide|length=277bp
MPCPSPRPVSTASILECCLNADKSLRRGSIHKPDPPFPSYLPLHSLPSVA
TPWSSLLPTQGFWLTSTPPSSLHRGLCTNRCPCARTRRRGSKDESDCGNG
RGKGGLEPQARVLRRGEEEEGGREGKEAFRALPSPLAHPKSPSLQTASLS
HAPSLSSSSSSSSSSSPPQSPNAILRAAVSSPQTPLPFLLSLLSQHASRT
YFDTETAAAFLNRLGKEQGRGLSVVRKDRGLQALLARLLILGEGVEDEGE
AGGGRGAREDSLAPGEEMERQGLHADT back to topmRNA from alignment at CM002466.1:180990..182313- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5517 ID=rna5517|Name=rna5517|organism=Nannochloropsis gaditana|type=mRNA|length=1324bp|location=Sequence derived from alignment at CM002466.1:180990..182313- (Nannochloropsis gaditana)
CACCACAGGGTCGAATGCGCAAGGCTCCGACATGAGACAATGCTCGGATT
GTGCCTCGGTGCTGAAAGTGGGGCAGGAAGAGTAAGGTTTTTGCAGGCAA
AGGCCCTTGGTCGTGGTTGAGGACGATCGCAGTGCTGTTGGACCTGCCGC
CCCGACGGGTCAAGACGCATCCTTTTCTTTGGTCGGAAAAAAGGGGGGAG
TGAAAGGGCTTGACTGGGCGACGTCATCTCACATCGAGGTCATGAAGACA
AAGCTACGACCTGGTTGGTGCTTGCCTCTTTTCCTGCTCATCGGTAAGAA
CGGAAGTTCCTCAAGAATTGGTATCAGAGGCTGAGTTGAATGTGTCCATG
TGTATCTTCAACAAAGCAACTCAGCCCCGCGTTGACTCTAAGCCTAAGCC
TTGTGTTGCACGCTAGACGGCATTGCCGCAGACCCTGGGGCCCGCATGGC
ATTTCTATGACTATCTCTGGTGTCCTGTGGCCCCTGCATGCCTTGCCCCT
CGCCTCGTCCTGTTTCCACAGCATCCATCCTTGAGTGCTGCCTGAACGCC
GACAAATCCTTGCGTCGAGGCAGCATCCACAAGCCTGACCCTCCTTTCCC
GTCTTATCTCCCTCTGCACTCCCTCCCTTCAGTGGCCACGCCCTGGTCCT
CCCTCCTCCCCACCCAAGGCTTCTGGCTCACTTCTACCCCACCTTCATCC
CTGCATCGCGGCCTTTGCACAAATCGGTGTCCTTGCGCAAGAACCAGACG
CCGAGGGTCCAAGGACGAAAGTGACTGCGGCAATGGCCGGGGAAAGGGGG
GCCTCGAGCCACAGGCCCGTGTCCTCAGGCGGGGGGAGGAAGAGGAGGGA
GGGAGGGAGGGCAAGGAGGCTTTCCGCGCCCTGCCCTCTCCTCTAGCCCA
TCCAAAAAGTCCTTCGCTGCAAACGGCCTCCTTGTCGCACGCTCCTTCCC
TTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCCCCCAGTCCCCT
AACGCAATCCTCCGGGCCGCCGTTTCCTCCCCGCAGACGCCCCTCCCTTT
CCTCCTCTCCCTCCTCAGCCAGCACGCCTCCCGCACCTACTTCGATACCG
AGACCGCGGCGGCCTTTCTAAACCGACTGGGCAAGGAGCAGGGGCGGGGC
CTGTCGGTGGTGAGGAAGGACAGGGGTCTTCAGGCGCTCTTGGCCCGACT
GCTGATCTTGGGGGAGGGGGTGGAGGACGAGGGGGAGGCGGGGGGAGGAA
GAGGGGCGCGCGAGGACTCTCTTGCGCCGGGAGAGGAAATGGAACGCCAA
GGCCTGCACGCTGATACTTAACGG back to topCoding sequence (CDS) from alignment at CM002466.1:180990..182313- >rna5517 ID=rna5517|Name=rna5517|organism=Nannochloropsis gaditana|type=CDS|length=834bp|location=Sequence derived from alignment at CM002466.1:180990..182313- (Nannochloropsis gaditana)
ATGCCTTGCCCCTCGCCTCGTCCTGTTTCCACAGCATCCATCCTTGAGTG
CTGCCTGAACGCCGACAAATCCTTGCGTCGAGGCAGCATCCACAAGCCTG
ACCCTCCTTTCCCGTCTTATCTCCCTCTGCACTCCCTCCCTTCAGTGGCC
ACGCCCTGGTCCTCCCTCCTCCCCACCCAAGGCTTCTGGCTCACTTCTAC
CCCACCTTCATCCCTGCATCGCGGCCTTTGCACAAATCGGTGTCCTTGCG
CAAGAACCAGACGCCGAGGGTCCAAGGACGAAAGTGACTGCGGCAATGGC
CGGGGAAAGGGGGGCCTCGAGCCACAGGCCCGTGTCCTCAGGCGGGGGGA
GGAAGAGGAGGGAGGGAGGGAGGGCAAGGAGGCTTTCCGCGCCCTGCCCT
CTCCTCTAGCCCATCCAAAAAGTCCTTCGCTGCAAACGGCCTCCTTGTCG
CACGCTCCTTCCCTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCC
CCCCCAGTCCCCTAACGCAATCCTCCGGGCCGCCGTTTCCTCCCCGCAGA
CGCCCCTCCCTTTCCTCCTCTCCCTCCTCAGCCAGCACGCCTCCCGCACC
TACTTCGATACCGAGACCGCGGCGGCCTTTCTAAACCGACTGGGCAAGGA
GCAGGGGCGGGGCCTGTCGGTGGTGAGGAAGGACAGGGGTCTTCAGGCGC
TCTTGGCCCGACTGCTGATCTTGGGGGAGGGGGTGGAGGACGAGGGGGAG
GCGGGGGGAGGAAGAGGGGCGCGCGAGGACTCTCTTGCGCCGGGAGAGGA
AATGGAACGCCAAGGCCTGCACGCTGATACTTAA back to top
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