|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101022g1.5278.mrna |
| Orig protein id | gnl|cribi|Naga_101022g1.5278 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:45833..46698 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5474 ID=rna5474|Name=rna5474|organism=Nannochloropsis gaditana|type=mRNA|length=504bp
ATGGTGGGCGTCGTTCGGTTCGGCGATATGCTGCTGGCTCTGATCGGGGT
GGTGGTGGTAACTGTCTACGCGGTTCCTTCCCTCCTCATCGCGATGGCCC
TGGCCCTCCCCCTCTCCCTCCGTCTCGCCTACTCCTTCCTCTCCCTCTCC
CAGCCCCTCAAGCACTACGAGGCCGCTACACGCTCTCCTGTATACAGCCA
CTTCGCCGAGGCTCTGGCAGGACTCATTGTCATCCGTGCCTATGGTCGAC
AGCCCCTCTTCCTCGCTCGCCTCCACCATGACATGGACGAGAGCAATCGA
GCGCATTATTACCTGTGGCTGACGAATTATTACCTCTCCATGCGTGCAGC
GGTGGCAGGCGCCACCGCCTTGGCCGTTACCCTTCAAGCAGCCAGAGGAG
GTATCGACGCGGCGGTGGCGGGATTGGCTCTGACGTACGCCCTTCCTTTC
TCTCAAGCGGTTGTCTTCTCCATACGGAGCCACGCCGAGTTGGAGTTAAG
GTGA back to topprotein sequence of rna5474 >rna5474-protein ID=rna5474-protein|Name=rna5474|organism=Nannochloropsis gaditana|type=polypeptide|length=259bp
MQPSPYKCPPTSNSSNAREQWQQVWSFTSSTITRPCTASFWGLGLVPFVA
AVVGQAWIWRSRRRRSRFPFNRPHACPGRSQRDNGVVHARGAARSHEHLP
ENSDDRAGGDDAGTTFITFAATQVAPQDDLPHHVHPTVTGGGATGTPAFR
NVRGRKAMAMDSDHGDLHAPLIPPSLPPSHPPFLPCSSHPSILSRSVLFA
REILLLLHLLYVTYCLLTLLDPAFRPSSDFSWQHALAIRLSQALTWTLVL
VEEEKRRGR back to topmRNA from alignment at CM002466.1:45833..46698- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5474 ID=rna5474|Name=rna5474|organism=Nannochloropsis gaditana|type=mRNA|length=866bp|location=Sequence derived from alignment at CM002466.1:45833..46698- (Nannochloropsis gaditana)
TCGGACAAAAAATACTTGGACAAGGTGCTTTGGGAAAAACGGGGCACGGG
GGTGGAGGGTAGGAGGTAAATAGCCCATCGTAAAAAGCATGCAGCCCTCC
CCGTACAAATGTCCTCCCACCAGCAACTCCAGCAACGCAAGGGAGCAATG
GCAACAAGTGTGGTCTTTTACATCGTCTACCATCACCCGTCCTTGTACCG
CGTCTTTCTGGGGTTTAGGGCTCGTCCCGTTCGTGGCGGCCGTCGTGGGG
CAGGCTTGGATCTGGCGATCCCGTCGACGACGAAGTCGCTTTCCTTTCAA
CCGGCCCCATGCCTGTCCAGGGCGGAGTCAAAGGGACAACGGGGTGGTGC
ATGCACGCGGGGCAGCCCGGTCGCACGAACATTTGCCGGAAAACAGCGAC
GATCGTGCCGGGGGTGACGATGCGGGAACGACTTTTATCACCTTCGCGGC
CACACAGGTTGCGCCCCAAGATGACCTACCTCATCACGTCCACCCTACCG
TAACCGGCGGGGGCGCGACTGGCACGCCAGCGTTCCGAAATGTCCGGGGA
AGGAAGGCGATGGCGATGGATTCCGATCACGGAGATCTGCACGCACCCTT
GATCCCACCCTCCCTCCCTCCCTCCCACCCTCCCTTCCTCCCCTGCTCCT
CCCACCCATCCATCCTCTCTCGGTCAGTACTCTTCGCCCGGGAAATTTTG
CTCCTCCTCCACCTCTTGTACGTCACCTACTGCCTCCTCACCCTCCTGGA
TCCCGCCTTCCGTCCCTCTTCGGACTTTTCCTGGCAACACGCATTGGCCA
TACGGTTAAGTCAGGCCTTGACTTGGACTCTGGTGCTGGTGGAGGAGGAA
AAAAGGAGGGGAAGAA back to topCoding sequence (CDS) from alignment at CM002466.1:45833..46698- >rna5474 ID=rna5474|Name=rna5474|organism=Nannochloropsis gaditana|type=CDS|length=778bp|location=Sequence derived from alignment at CM002466.1:45833..46698- (Nannochloropsis gaditana)
ATGCAGCCCTCCCCGTACAAATGTCCTCCCACCAGCAACTCCAGCAACGC
AAGGGAGCAATGGCAACAAGTGTGGTCTTTTACATCGTCTACCATCACCC
GTCCTTGTACCGCGTCTTTCTGGGGTTTAGGGCTCGTCCCGTTCGTGGCG
GCCGTCGTGGGGCAGGCTTGGATCTGGCGATCCCGTCGACGACGAAGTCG
CTTTCCTTTCAACCGGCCCCATGCCTGTCCAGGGCGGAGTCAAAGGGACA
ACGGGGTGGTGCATGCACGCGGGGCAGCCCGGTCGCACGAACATTTGCCG
GAAAACAGCGACGATCGTGCCGGGGGTGACGATGCGGGAACGACTTTTAT
CACCTTCGCGGCCACACAGGTTGCGCCCCAAGATGACCTACCTCATCACG
TCCACCCTACCGTAACCGGCGGGGGCGCGACTGGCACGCCAGCGTTCCGA
AATGTCCGGGGAAGGAAGGCGATGGCGATGGATTCCGATCACGGAGATCT
GCACGCACCCTTGATCCCACCCTCCCTCCCTCCCTCCCACCCTCCCTTCC
TCCCCTGCTCCTCCCACCCATCCATCCTCTCTCGGTCAGTACTCTTCGCC
CGGGAAATTTTGCTCCTCCTCCACCTCTTGTACGTCACCTACTGCCTCCT
CACCCTCCTGGATCCCGCCTTCCGTCCCTCTTCGGACTTTTCCTGGCAAC
ACGCATTGGCCATACGGTTAAGTCAGGCCTTGACTTGGACTCTGGTGCTG
GTGGAGGAGGAAAAAAGGAGGGGAAGAA back to top
|