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Properties
Property Name | Value |
Product | sodium-dependent glucose transporter 1 |
Orig transcript id | gnl|cribi|Naga_100541g3.964.mrna |
Orig protein id | gnl|cribi|Naga_100541g3.964 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002455.1 | supercontig | CM002455.1:1367727..1369286 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna547 ID=rna547|Name=rna547|organism=Nannochloropsis gaditana|type=mRNA|length=1389bp GATAAAATGTTACTTACTCAGACGCGTAGAGTCTCGGATAAGATGTCTTC CTTGTGCCTTTCACCACACAACCAGACCAGACTTTTGTACTTCGTTTGCA TTCCAGCGAGCGACGCCAGGGCGTGTCACCACTATGGCTCCCAACGCCAT TTGGACCAAGGGGGGCCTTCGTGACGGGGTCAGGAGGTTAAAGGAATACC TCTTACTCACATGCGTTTATTGCAATGTGGGACACAGACAGGTTTGAGCA GGCCGAATGACCCCGCGCATGATATTTGGGGGATGAATGTGGATGTCGAA CCAGCAGAAGGGGAGCCCCGGATGGATACCGGCAACACAGCATTGCCTCG CGGCAGTCCCGGACTGGGAAAGAGCACAAACGACTTGCATGATGCCGCCA AGAACTCCGCGTTCCAACAAGCACAGGAGCTGGAGAACCTGGACAAGCTA CAAGATCGCCTCTTGGAAGCCGTCGGCATCGCATCCCAGACGCTTCGACA GCTGAGCAACCCCGAGGAATTCGAAGAGGAAGAGGTCCAGAAAGCCTACC AATCGTATCTTGAGCTCATGCGTGAAGTACACGAAGGACTCGCATCTCGC GCGGCTTGGGTCAAAAATTACGTTCCATACCGTCGAAACACAAAGGAACT AAGGCGTGAAGTCCGAATAAAAGAAATGCGGGTGGTCTGGCTGAAAGAGG AGGCACGACGGTGGGGCTACAAGGACGAGGAGGCCAGAGGGGAGGAGGAG GGGATAGGTCGTCCGGGAGGGGTAAAGACACCCTCTGGGAAAGAATCCGA GTCGGATAGTCGGTAAGTGTGGATACATAGCATGAAAAAGAGGTTAACAC ATAAACGGCAGGCGCCCCTCCCGTCCCACGCCCGCCTTGTCGCAGGGAAG CACCGGGTCGGCCCCGCCTCTGGGCTTTTGCGGGGGTTTTCGGTGTTGCC TCCCACGAATGCCGGAGCGCAGCATTTTTTTCGTTCGTGGGTAAAGGCGA AGCACATCTTAGATCAGAAATCAAAGACAAACAGCTACATTGCGGACTCT CGCTTTGTCCAAAGAGGAAGCGGGGCCCCGCACGCCGCACAGGAAGTGTT ACAGCCAGCGTACCCCTCTTTTCCCTGTCAAAAATTACCTCTTCCCTTCC TTCCTCCTCCGACTTATGAAACACATTCCCGCCGAGTAGTTTCCCCCCCA GCACCACTCCATCCCTGCACGTCTCCTGTCATTCCTCATATCAAACATGC TGCCCCCTGCCCCCCCTTGCCAACCCGCGCCTTCGCAGTGAGGCGCAGAG CTAGCCTCGGCATTTTTCGGATATCTCCGAGCCTCCTCCCCGATCTCGCT CACCAACGACCACATCCAGCACCATCACCTACTCCCTGC back to topprotein sequence of rna547 >rna547-protein ID=rna547-protein|Name=rna547|organism=Nannochloropsis gaditana|type=polypeptide|length=519bp MYSEEIEEGVRRSVCRARPASYPRPARGVGLITVIACISFFSLGGLVGVT GPAIPSLTVHLGCRDETQLGSAFTCRGAGYLTGAVLASVLDTRCSKGKHL VVVMGSLLAGLATLGIVWTHVFSGFLVLMVLQGLGLGCVDTAANAVVLEL WGGSPHVEPLMQAMHACFGIGAVASPAAVGALGYVLAFRLWASIALLPLF LWAGGLMMAGTGRTGDGEVLWGEATLPLLRDGAHHSEEGREEEPGSSRKE RETLPRPFRDREAGLGRPTSVPSTVLAHAQAASPKPSIAPPASSPLASLP KSLQAGVSFFLLIYVGIEVGYGGWIATVLLRQGLTQSLPVASYSVSMFWG AITLGRLLAIPLATCLPPVPSLLLQLGLSTLGAICLLTFAFQTLWTAAVA SVVFGLGLSSIFPTVMLLPEALGYQVTMWSTSTFLVGACLGEGIIPMGIG WLMGSKGIGTGSFAWAMAAACLALWVLAGCFFSRWRVRAGTGCPPGRGGG EGGGQARMGEDIETVPGPA back to topmRNA from alignment at CM002455.1:1367727..1369286+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna547 ID=rna547|Name=rna547|organism=Nannochloropsis gaditana|type=mRNA|length=1560bp|location=Sequence derived from alignment at CM002455.1:1367727..1369286+ (Nannochloropsis gaditana) ATGTACAGCGAGGAGATTGAAGAGGGCGTCCGGCGTTCCGTCTGTCGTGC
AAGACCAGCCTCGTATCCTCGTCCGGCACGGGGCGTGGGGCTCATAACTG
TCATCGCAtgcatctctttcttttccttgggGGGCTTGGTCGGAGTGACG
GGGCCCGCCATTCCAAGCCTCACCGTCCACCTGGGGTGCCGCGACGAAAC
TCAACTTGGTAGCGCCTTCACATGTCGCGGAGCCGGCTATTTGACGGGGG
CCGTGCTGGCGTCGGTGCTCGACACCCGATGTTCGAAGGGAAAAcacctg
gtggtggtgatgggaAGCCTCTTGGCAGGCTTGGCGACCTTGGGGATCGT
CTGGACGCACGTGTTTTCGGGGTTTCTGGTCCTGATGGTGTTGCAAGGCT
TGGGTCTGGGGTGTGTGGATACGGCCGCAAATGCGGTGGTGCTCGAGCTG
TGGGGGGGCAGCCCACACGTGGAACCGCTCATGCAAGCTATGCACGCCTG
CTTTGGGATCGGTGCGGTGGCTTCTCCTGCCGCAGTGGGTGCCTTGGGTT
ACGTGCTGGCCTTCCGACTCTGGGCAAGCatcgcgctcctccctctcttc
ctgtGGGCCGGCGGCCTGAtgatggcggggacgggaaggacagGCGACGG
CGAAGTGTTGTGGGGGGAAGCAACCCTCCCGCTGTTGAGGGACGGAGCCC
ATCatagcgaggagggaagggaggaggagccggggAGCTctaggaaggag
agggagaccctccccaggccgttccgcgacagggaggcaggTCTCGGGAG
ACCCACATCTGTACCCAGCACGGTCCTCGCACATGCCCAAGCGGCCTCCC
CCAAGCCCTCCATTGCCCcgccggcgtcctccccccttgcctccttgccc
aAGAGCCTCCAGGCGGGCGTGTCGTTCTTTCTGCTCATCTACGTCGGCAT
TGAAGTTGGGTACGGGGGCTGGATcgccaccgtcctcctccgtcagggGC
TCACCCAGTCTTTACCCGTCGCTTCCTACTCCGTCTCCATGTTTTGGGGC
GCCATCACCCTCGGTCGTCTCCTTGCCATCCCTCTGgccacctgcctccc
ccccgtcccgtccctcctcctccagctcggccTCAGCACCCTGGGAGCCA
TCTgtctcctcaccttcgccTTCCAAACCTTGTGGACCGCCGCCGTGGCC
AGCGTCGTCTTCGGTTTGggtctctcctccatttttcccACCGTGATGCT
CCTCCCAGAAGCCCTAGGGTACCAGGTGACCATGTGGAGCACCAGCACCT
TCCTGGTCGGGGCctgcctgggggagggaatcaTCCCCATGGGCATAGGC
TGGTTGATGGGGTCGAAAGGCATTGGGACTGGGAGTTTTGCCTgggccat
ggcggcggcTTGTCTGGCCTTGTGGGTTTTGGCCGGGTGCTTCTTCTCGA
GGTGGCGCGTACGTGCGGGGACAGGGTGCCCTCCtggcagagggggggga
gaaggggggggacaggcgCGGATGGGGGAGGATATAGAGACAGTGCCGGG
CCCTGCTTAG back to topCoding sequence (CDS) from alignment at CM002455.1:1367727..1369286+ >rna547 ID=rna547|Name=rna547|organism=Nannochloropsis gaditana|type=CDS|length=1560bp|location=Sequence derived from alignment at CM002455.1:1367727..1369286+ (Nannochloropsis gaditana) ATGTACAGCGAGGAGATTGAAGAGGGCGTCCGGCGTTCCGTCTGTCGTGC AAGACCAGCCTCGTATCCTCGTCCGGCACGGGGCGTGGGGCTCATAACTG TCATCGCAtgcatctctttcttttccttgggGGGCTTGGTCGGAGTGACG GGGCCCGCCATTCCAAGCCTCACCGTCCACCTGGGGTGCCGCGACGAAAC TCAACTTGGTAGCGCCTTCACATGTCGCGGAGCCGGCTATTTGACGGGGG CCGTGCTGGCGTCGGTGCTCGACACCCGATGTTCGAAGGGAAAAcacctg gtggtggtgatgggaAGCCTCTTGGCAGGCTTGGCGACCTTGGGGATCGT CTGGACGCACGTGTTTTCGGGGTTTCTGGTCCTGATGGTGTTGCAAGGCT TGGGTCTGGGGTGTGTGGATACGGCCGCAAATGCGGTGGTGCTCGAGCTG TGGGGGGGCAGCCCACACGTGGAACCGCTCATGCAAGCTATGCACGCCTG CTTTGGGATCGGTGCGGTGGCTTCTCCTGCCGCAGTGGGTGCCTTGGGTT ACGTGCTGGCCTTCCGACTCTGGGCAAGCatcgcgctcctccctctcttc ctgtGGGCCGGCGGCCTGAtgatggcggggacgggaaggacagGCGACGG CGAAGTGTTGTGGGGGGAAGCAACCCTCCCGCTGTTGAGGGACGGAGCCC ATCatagcgaggagggaagggaggaggagccggggAGCTctaggaaggag agggagaccctccccaggccgttccgcgacagggaggcaggTCTCGGGAG ACCCACATCTGTACCCAGCACGGTCCTCGCACATGCCCAAGCGGCCTCCC CCAAGCCCTCCATTGCCCcgccggcgtcctccccccttgcctccttgccc aAGAGCCTCCAGGCGGGCGTGTCGTTCTTTCTGCTCATCTACGTCGGCAT TGAAGTTGGGTACGGGGGCTGGATcgccaccgtcctcctccgtcagggGC TCACCCAGTCTTTACCCGTCGCTTCCTACTCCGTCTCCATGTTTTGGGGC GCCATCACCCTCGGTCGTCTCCTTGCCATCCCTCTGgccacctgcctccc ccccgtcccgtccctcctcctccagctcggccTCAGCACCCTGGGAGCCA TCTgtctcctcaccttcgccTTCCAAACCTTGTGGACCGCCGCCGTGGCC AGCGTCGTCTTCGGTTTGggtctctcctccatttttcccACCGTGATGCT CCTCCCAGAAGCCCTAGGGTACCAGGTGACCATGTGGAGCACCAGCACCT TCCTGGTCGGGGCctgcctgggggagggaatcaTCCCCATGGGCATAGGC TGGTTGATGGGGTCGAAAGGCATTGGGACTGGGAGTTTTGCCTgggccat ggcggcggcTTGTCTGGCCTTGTGGGTTTTGGCCGGGTGCTTCTTCTCGA GGTGGCGCGTACGTGCGGGGACAGGGTGCCCTCCtggcagagggggggga gaaggggggggacaggcgCGGATGGGGGAGGATATAGAGACAGTGCCGGG CCCTGCTTAG back to top
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