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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100089g18.9640.mrna |
| Orig protein id | gnl|cribi|Naga_100089g18.9640 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:1063283..1064515 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5462 ID=rna5462|Name=rna5462|organism=Nannochloropsis gaditana|type=mRNA|length=2895bp
GATGGGCTATGTTCAATTCCTTCACTCTATAACCCTATCAATGTCCCAGT
CAAATGATATCGCCCGATAAACTTATTCCTGGACAGAGGTGTTGTCTCTT
AACATGCAACTGAATGTCCACTTGTCAAGGCTTTGAGGTAATGGCGGGCT
TTCTCATGCGGAGGGAAGCGTTGGTAGAACCAAACACTTCGACACGCATT
AGATGATAGGGACATCTTCACACAGGTAAAAGGGATCGAATGGACAAGCT
TTCGTAGTCAAGACTGAAAATCATACTGTGGAATCTATACGGGATAGATT
TGCGCCCACTGCTAGCGCCTTGGGGGGTAGGGACAGGGCGCCGCCGCTCG
TTACTTCAAGTGCTACACTGCGCTTTCACAAAACTCAGAGGTTGCCTCAC
CCACATTAAAGAATCACGTACCGTTCCGTACTTCACGTGCAAAATATACA
CAGGACAAAGTGTGAAGTCTGGCATGTAAGATGCCACTCGCATTTCTTTA
CGTATAATGCGAAGCCCTCGATTCATAATTGGTGTAGTAACCTCCTCTTC
CCAATTTTCCTGGAAGCTTTTTCCCTTGTTTTCATTTAAAAGAACAGTTG
GGAAAATATAATGGCTTCAAATTGGCAAAGAAAGCTTGAAAAAGCAGTCG
TCCTCATACTTAGCGGCATCTGGCGCATAAGATTGACCTTGTCTGCAACG
CTCGATTCTCCGTCGCCCCAAGCCTGGCCCTCTTCATACACCGTGGCGAA
CGCCCCTGGACGTGCGCCCTTCTTTCGGGGCGACTCCTTCGTGGTGTACT
CACAACCTATGACTACCAAGTATGGAGAGGCCTGCAACGAGAGGCAAGCG
CCGATTCCCTTGCCTGCTTACATTGCCGCTCGCTTCAACGGGTCGGTCAT
GGCGGTAACAGGTCTGGAGGTCGACGTCGTCCAAGTCGACTCTAACACAG
GCCTAGAGCGAAGCGTGCCCAGGGCAGATTTTTACAATCATCATTATATA
CTTGGGCTGCGCTCCGCCTGGTACATATCCCCCTCTGCGTCTCCAAGTGA
TGAAGAGCAAGTTGAGCAGCAGGAAGCAATTAGCACCGGTAGTCGGGAAG
GAAATGCAACGCATGGCCTGCTTTTGCCCCACGGCGGTAAGGGCCGCGTG
CGAGATGGTAGTTTTCGAAAAGATATCGCAGACGCTGACCTCAAGGCGTC
AACGAGCAGCCACGACCAGGGAACCTTCGGTGGCGTCAGGCGCACCCAGG
AGAGCGCCGTGCTCCAACCTGATCTTGGCGACCGTCTGAGCCCCAAGACC
TCGGCTTCAGCTCCTCCTCTACGGAATGTCTCCAGAGCCATCTCTGCCTT
ACGAGGGACCATCCCTCTCCTTCAAGTTTTCTGTGAGGCCAATGGGGGGG
AATATAAGGAAACCTACCGAGGTTTTCCACCCGGCTATGCCCAACTGATT
GCCTCCCCCGCCTATTTCTGGCCAATTCAGCTTCATTTTATCAATACCAG
GGCCTCTGTACCTCGCTCCCTCGTCCCTGCCTCGTCCCGCGCCGACCCAA
CCCGGGACTCATGGAACGGACTGATCGAATGCCCCTGCTCCAACAGGCGG
ACCTTCGACCTGAGGGCGAATTTGGTGGATGGGAAGCCCCCATACCCGGT
CCACTGCCAAGGTGAGGTGCTGGCCCAGAGGAATCCCGTCTGCTCCCTTG
CCACCTACCAAGGTGGCCTCCGCTGCTGCGAGCCTGGCATGGTCTTGCTG
GACAGGGAGCAGCTGCAGCCAGTGGAGGAGGACACCTACCTACTGAAGGT
GCGCTTCTGGTACGAGGAGTACCGCGAGGAGGGGGCCGGGCAAGGGCGGG
GGGACGCAGTGGAGGGCATTGTGGGCAAAGGGCCGAGAATGGTTCAGGAG
GGGGGGAGAGCGGTTGTATCTGGGCATGAGAAAGGGAAAGTAACGGTGGG
GAGGGAGGAAAAGGGGGAGCCGCCCGAAGGAAAAATTACCGACGACAGGG
TGGAGGGAGTTCGGAGGCTTGCTGCTGTCAAAGACAGCAAGATGCCTGTA
TATGAGACGTACGAAGAACCAGAGCCTTCACCACCGATTCGCGCCTCGCA
TGCTCACCTGTTCAAAGTCTACCTCCAGACGGAGCAGTGGGCGGGCGAGT
ACGACGTCCCCCCCTGCGACCCCCGCACCACCCTCGATTCCTCCCAGTGC
GTACACGTGCTTACGAGTCTCAACGTTGCCCGCGAGCTCTTTAGCGATTG
CGCCTTCTCGACTGATAAGGACTGCGCGGACCTGAAAGCCCTTAGGGAGG
CGGGGGGCCTGTTCAAGCTCGTGTACGCGGCGGGGCACGTGCACGTCGGG
GGGCTGTCGCTGGAGCTGATCAATGCCGATACAGGCGCTCTGATCTGTCG
CAACGAACCTATTTACGACCCGGCGACTGGGCTTATCGCCAGCACTCCCC
CCTGTGTGTGGGGCGACGTGCAGGAGGCAGAGGGAGAGGGGGAGGGCGGG
CGTCAGCTGCTTCCAGCTCCGCCGGTGCTGCATGCCGAGACCCGGCTCCT
GTCGATTGCTCGGTATAATTCGAGCGGGAGCGGGCATTTGGGGGTGATGG
CTTCCTGGCAGATGCGCGCAGCCTACGCTTTTGGGGATGTTTGAATGTCT
GGATCTCAGGTGGAAAGCAGGAGGAGGGCGGAGGTGCTGCAGTTGTCCTG
CTCTCCATAAAACCGTTTGTGTTCGTTTCAATCTAAGTATACTCGGGAAA
AAGTCAAAATAGCGTCTGTCTTTTTCTTGGAAGAAAAAAAGACGACGACA
AGAAACAGTCAGACCGCGAGGCCGCTGCTTGAAGTGCGTGCCTCCGGGCA
AGCTTTCTCGCCGTCTAGCAGTCTTAAGTTCTTCTCGTCTAAACA back to topprotein sequence of rna5462 >rna5462-protein ID=rna5462-protein|Name=rna5462|organism=Nannochloropsis gaditana|type=polypeptide|length=367bp
MGILSTYIKFLAGNMCTRSFVWIMRQEFVGRSHQSDDVAVHLDFHHTCML
SLAPYPYLFTGTRCSTGWTSKGGMAPLGSPLACSFMVLATFLPTFVFGFW
QSSFPPHRALVRQKASPYNTPFPPPPGGRRRGSKWIDPELIKQKELEKRQ
SKQQRDGAFTSKQGLNNRDKSKHMMRQARAQLQVEVDTLIGRLTGIYAQV
KDQSNKIVTFGVAEFNPKVASLTAEIGAKLESLLQQLEELRGSLKEGEED
AGVAGGVGTGSRRESDLSLETSTLKSLSNDLESLLQLIESREQEVDVLLR
KGEGSCIQSKILAQMYLIFLALSNTLDRKARKWKEWWTVFVQRDILKSGW
LVLCQEQAPQRDGWRNL back to topmRNA from alignment at CM002465.1:1063283..1064515- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5462 ID=rna5462|Name=rna5462|organism=Nannochloropsis gaditana|type=mRNA|length=1233bp|location=Sequence derived from alignment at CM002465.1:1063283..1064515- (Nannochloropsis gaditana)
ATGGGTATTTTGTCCACGTACATCAAGTTCTTGGCAGGGAATATGTGTAC
GAGATCTTTTGTCTGGATAATGCGGCAAGAGTTTGTCGGAAGAAGCCATC
AGTCTGATGACGTTGCCGTCCATCTCGACTTTCATCATACCTGCATGTTG
TCGTTGGCACCATACCCATATCTCTTTACCGGGGTAGATTGACCTCTGTT
TGCTTCCTTTCCCGTCGGCATATTTCAATATACGTTAGACAAGGTGCTCA
ACAGGCTGGACATCGAAAGGAGGAATGGCGCCGCTAGGCTCTCCCCTCGC
TTGTTCTTTTATGGTGCTGGCCACCTTCCTTCCGACTTTTGTTTTTGGTT
TTTGGCAGTCTTCCTTTCCACCACATCGCGCACTAGTAAGACAAAAAGCA
TCACCATACAACACACCTTTCCCTCCTCCACCTGGTGGACGCCGCCGGGG
GAGCAAATGGATCGATCCTGAGCTCATCAAACAAAAAGAACTAGAAAAGC
GCCAAAGTAAGCAACAGAGAGATGGGGCTTTCACATCGAAGCAGGGGTTG
AACAACAGGGATAAAAGTAAACATATGATGAGACAAGCGCGGGCTCAATT
GCAGGTGGAAGTGGATACCCTTATTGGGCGACTTACTGGCATCTATGCAC
AAGTGAAAGATCAGAGCAACAAGATCGTTACTTTTGGCGTGGCAGAGTTC
AACCCTAAAGTCGCCTCGTTGACAGCAGAAATTGGGGCCAAACTGGAAAG
TCTCCTGCAGCAATTGGAAGAGCTCAGAGGGTCGTTAAAGGAAGGGGAAG
AAGATGCGGGCGTTGCTGGGGGAGTGGGCACAGGCAGTCGGAGGGAGTCG
GACTTGTCCCTGGAGACTTCTACTCTGAAGTCCTTAAGCAATGATCTGGA
AAGCTTGTTGCAGCTGATCGAGTCTCGAGAGCAGGAGGTGGACGTATTGC
TCCGGTCTTTAGGCATGGAGGAGGAAGGGGAACAAGGGAAGGATTGATAA
TTGTTTGACCGCACTGGGCCAGGTGAAGAAAGGGAGAAGGGAGCTGCATA
CAATCAAAGATCCTTGCGCAAATGTATTTAATCTTTTTAGCTCTTTCAAA
TACTTTGGATAGGAAGGCACGGAAATGGAAAGAATGGTGGACAGTGTTTG
TGCAGCGAGACATTCTGAAGTCAGGGTGGCTCGTTTTGTGCCAGGAGCAA
GCGCCACAGAGGGACGGCTGGAGAAATCTTTAA back to topCoding sequence (CDS) from alignment at CM002465.1:1063283..1064515- >rna5462 ID=rna5462|Name=rna5462|organism=Nannochloropsis gaditana|type=CDS|length=3312bp|location=Sequence derived from alignment at CM002465.1:1063283..1064515- (Nannochloropsis gaditana)
AAAGGGAGAAGGGAGCTGCATACAATCAAAGATCCTTGCGCAAATGTATT
TAATCTTTTTAGCTCTTTCAAATACTTTGGATAGGAAGGCACGGAAATGG
AAAGAATGGTGGACAGTGTTTGTGCAGCGAGACATTCTGAAGTCAGGGTG
GCTCGTTTTGTGCCAGGAGCAAGCGCCACAGAGGGACGGCTGGAGAAATC
TTTAAACAAGGTGCTCAACAGGCTGGACATCGAAAGGAGGAATGGCGCCG
CTAGGCTCTCCCCTCGCTTGTTCTTTTATGGTGCTGGCCACCTTCCTTCC
GACTTTTGTTTTTGGTTTTTGGCAGTCTTCCTTTCCACCACATCGCGCAC
TAGTAAGACAAAAAGCATCACCATACAACACACCTTTCCCTCCTCCACCT
GGTGGACGCCGCCGGGGGAGCAAATGGATCGATCCTGAGCTCATCAAACA
AAAAGAACTAGAAAAGCGCCAAAGTAAGCAACAGAGAGATGGGGCTTTCA
CATCGAAGCAGGGGTTGAACAACAGGGATAAAAGTAAACATATGATGAGA
CAAGCGCGGGCTCAATTGCAGGTGGAAGTGGATACCCTTATTGGGCGACT
TACTGGCATCTATGCACAAGTGAAAGATCAGAGCAACAAGATCGTTACTT
TTGGCGTGGCAGAGTTCAACCCTAAAGTCGCCTCGTTGACAGCAGAAATT
GGGGCCAAACTGGAAAGTCTCCTGCAGCAATTGGAAGAGCTCAGAGGGTC
GTTAAAGGAAGGGGAAGAAGATGCGGGCGTTGCTGGGGGAGTGGGCACAG
GCAGTCGGAGGGAGTCGGACTTGTCCCTGGAGACTTCTACTCTGAAGTCC
TTAAGCAATGATCTGGAAAGCTTGTTGCAGCTGATCGAGTCTCGAGAGCA
GGAGGTGGACGTATTGCTCCGATGGGTATTTTGTCCACGTACATCAAGTT
CTTGGCAGGGAATATGTGTACGAGATCTTTTGTCTGGATAATGCGGCAAG
AGTTTGTCGGAAGAAGCCATCAGTCTGATGACGTTGCCGTCCATCTCGAC
TTTCATCATACCTGCATGTTGTCGTTGGCACCATACCCATATCTCTTTAC
CGGGAAAGGGAGAAGGGAGCTGCATACAATCAAAGATCCTTGCGCAAATG
TATTTAATCTTTTTAGCTCTTTCAAATACTTTGGATAGGAAGGCACGGAA
ATGGAAAGAATGGTGGACAGTGTTTGTGCAGCGAGACATTCTGAAGTCAG
GGTGGCTCGTTTTGTGCCAGGAGCAAGCGCCACAGAGGGACGGCTGGAGA
AATCTTTAAACAAGGTGCTCAACAGGCTGGACATCGAAAGGAGGAATGGC
GCCGCTAGGCTCTCCCCTCGCTTGTTCTTTTATGGTGCTGGCCACCTTCC
TTCCGACTTTTGTTTTTGGTTTTTGGCAGTCTTCCTTTCCACCACATCGC
GCACTAGTAAGACAAAAAGCATCACCATACAACACACCTTTCCCTCCTCC
ACCTGGTGGACGCCGCCGGGGGAGCAAATGGATCGATCCTGAGCTCATCA
AACAAAAAGAACTAGAAAAGCGCCAAAGTAAGCAACAGAGAGATGGGGCT
TTCACATCGAAGCAGGGGTTGAACAACAGGGATAAAAGTAAACATATGAT
GAGACAAGCGCGGGCTCAATTGCAGGTGGAAGTGGATACCCTTATTGGGC
GACTTACTGGCATCTATGCACAAGTGAAAGATCAGAGCAACAAGATCGTT
ACTTTTGGCGTGGCAGAGTTCAACCCTAAAGTCGCCTCGTTGACAGCAGA
AATTGGGGCCAAACTGGAAAGTCTCCTGCAGCAATTGGAAGAGCTCAGAG
GGTCGTTAAAGGAAGGGGAAGAAGATGCGGGCGTTGCTGGGGGAGTGGGC
ACAGGCAGTCGGAGGGAGTCGGACTTGTCCCTGGAGACTTCTACTCTGAA
GTCCTTAAGCAATGATCTGGAAAGCTTGTTGCAGCTGATCGAGTCTCGAG
AGCAGGAGGTGGACGTATTGCTCCGATGGGTATTTTGTCCACGTACATCA
AGTTCTTGGCAGGGAATATGTGTACGAGATCTTTTGTCTGGATAATGCGG
CAAGAGTTTGTCGGAAGAAGCCATCAGTCTGATGACGTTGCCGTCCATCT
CGACTTTCATCATACCTGCATGTTGTCGTTGGCACCATACCCATATCTCT
TTACCGGGAAAGGGAGAAGGGAGCTGCATACAATCAAAGATCCTTGCGCA
AATGTATTTAATCTTTTTAGCTCTTTCAAATACTTTGGATAGGAAGGCAC
GGAAATGGAAAGAATGGTGGACAGTGTTTGTGCAGCGAGACATTCTGAAG
TCAGGGTGGCTCGTTTTGTGCCAGGAGCAAGCGCCACAGAGGGACGGCTG
GAGAAATCTTTAAACAAGGTGCTCAACAGGCTGGACATCGAAAGGAGGAA
TGGCGCCGCTAGGCTCTCCCCTCGCTTGTTCTTTTATGGTGCTGGCCACC
TTCCTTCCGACTTTTGTTTTTGGTTTTTGGCAGTCTTCCTTTCCACCACA
TCGCGCACTAGTAAGACAAAAAGCATCACCATACAACACACCTTTCCCTC
CTCCACCTGGTGGACGCCGCCGGGGGAGCAAATGGATCGATCCTGAGCTC
ATCAAACAAAAAGAACTAGAAAAGCGCCAAAGTAAGCAACAGAGAGATGG
GGCTTTCACATCGAAGCAGGGGTTGAACAACAGGGATAAAAGTAAACATA
TGATGAGACAAGCGCGGGCTCAATTGCAGGTGGAAGTGGATACCCTTATT
GGGCGACTTACTGGCATCTATGCACAAGTGAAAGATCAGAGCAACAAGAT
CGTTACTTTTGGCGTGGCAGAGTTCAACCCTAAAGTCGCCTCGTTGACAG
CAGAAATTGGGGCCAAACTGGAAAGTCTCCTGCAGCAATTGGAAGAGCTC
AGAGGGTCGTTAAAGGAAGGGGAAGAAGATGCGGGCGTTGCTGGGGGAGT
GGGCACAGGCAGTCGGAGGGAGTCGGACTTGTCCCTGGAGACTTCTACTC
TGAAGTCCTTAAGCAATGATCTGGAAAGCTTGTTGCAGCTGATCGAGTCT
CGAGAGCAGGAGGTGGACGTATTGCTCCGATGGGTATTTTGTCCACGTAC
ATCAAGTTCTTGGCAGGGAATATGTGTACGAGATCTTTTGTCTGGATAAT
GCGGCAAGAGTTTGTCGGAAGAAGCCATCAGTCTGATGACGTTGCCGTCC
ATCTCGACTTTCATCATACCTGCATGTTGTCGTTGGCACCATACCCATAT
CTCTTTACCGGG back to top
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