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Properties
Property Name | Value |
Product | guanylate-binding protein |
Orig transcript id | gnl|cribi|Naga_100089g12.9641.mrna |
Orig protein id | gnl|cribi|Naga_100089g12.9641 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002465.1 | supercontig | CM002465.1:1048482..1051845 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5458 ID=rna5458|Name=rna5458|organism=Nannochloropsis gaditana|type=mRNA|length=1685bp GCGGTACTTCCTTACCATCGTATTCTTGTCTTATTTGAGCCTATTCCACA GTGATAACAGCATTCTTTCATTACACATATTGAAATTATAAATCTTCGGC TTTTATCGTTGAAGTTTTCAGTAGAATGATCTCAGAAGTGACGGAGTTTT CAAGAGATGCTACCGCGATGTCTGAGTACGGAAGTTTTGCGAAGAAAACC AGAGTCGGAGCTGCAACGGGCGGGCCTGTAGCAAAGTGTCCATCTATCCT GTCACTCGCTCTTCTCGTGGTCCTCACACTGGGATCATGTAATGCTTTGG TGTATAAAATCATGTACCAAGTCTATGGTTCTGATGGCGCGTTTTTTGTT TCGACGGGCGTCAACGTTTTGTACATTATCTACGGCGGGCTTTTGCTGTA CCCTCGGATGCTTTTCACTGATAGCATCACGCCCGCTATGAAAGCCCTGC CGAAGCGCCGATTCATAATAATGGGATTCCTCGACTGTTGCGGCACATTT CTTGCGGCGATGGGTGCCGTCTATACGCCAGGGAGTGTGCAAACCCTCCT GAACCAGACGCTCATCCCGACCACCATGATCGTCTCAGCCTGCTTCTTGA GGACACACTTCTCCAACGTCCAATTAGCAGGGGCGGCCCTGGTTCTGATG GGGGCCGCGGTCACTGTCCTGCCTGCCTTTATCACGGCGGAGAGCGATAG CAACAATGGGCATGGAGCGAGCCCTTCTCAATCTCGGTGGTACGCGAACC TGGTCTTTTTCGCCAGCAACCTCCCAGTGGCGTGCTCCCAAGTGTACAAG GAGAGGGCCTTCAAGCGGGACAGCGTTGATGTCCTGTACCTGACCCAATG GGTGTCTGTCTTCCAGTTCTTCTTCGGCCTGGCCCTTGCTCCTCTTCAAG CCCTCCCTGGCATCGGCAGCGCCCACGGCGTCCCTCTCTCCTCCATCCCC ACCGCATTCCTCGAAAGCTGGGACTGCTTCCTGGAGAAACCCACCTCCGT GTGTCACGGTCAGTGGCCCGCCCCCTCCCTCCTCCTGCTCGCCTTCTGCG CAGTCAACCTTGTCTTCAACACGGGAGGACTCTACGTCTCTAAGCACGGC TCCGCTGTTCTCAACGTGATCACCTACGCGGTTCTTCTCCCCGTGACCAC CCTCATCTTCTCTTTACGGCCCCTCATGGGTGCCTTCACAGAGCCCCTGT CGGCGAGCACGGTGTTGGGCTTGCTCCTGGTGCTCCTGGGATTTTATCTC TATCAAGAGCCAATGCTATGGCTGGGGAGACGCGACCACGGAAAAGGCGT AGATGGGGGGGACGAAAAGGGTAAGGTGCTCAGGGAAGGACTGAAAGAGG ACGGAGGGGGAGCGCAGACGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAG GAGGAGGATGAGGAGGAGCAAGGCACTATGGGCATACACGTGCCTTCCTT TCAGGAGCGTGTGGTGGCAGGCTTGGGTCCAGCCATCTATCAGGCTCATA CACAGGGGCATCCCTACCAGTTGGTGCCTCCAATGGTGAATGTAGGGGTC TCTGATGCTTCCATTTTTAATGTGGAGTGATGGGGAAGTTGTACAGAGCA TGTAAAGCAACAGGACAGAAACGCAGCGTATACAGCGCTATCACATTTTC TAAGACGAATCTTATACGACATCTCATTTTGTAAT back to topprotein sequence of rna5458 >rna5458-protein ID=rna5458-protein|Name=rna5458|organism=Nannochloropsis gaditana|type=polypeptide|length=952bp MWPLLSVFVLLLLIGASGLSARGITQLRESSPLQNPFQLLAPADASRTSL VIMEEGIQVLESLEGPVAVVAVVGPYHTGKSFLLNNLVRGLKARRASETD TGDKVAESEESCLNPDNTTTFGVFEVGKSVDPSTAGVWAYHQRVRLPAQE AYPSAAPRKEEEIDLLLLDTEGFAVANVSEAYDAQIFAAATVLSSVLVYN SMHLIDAKELEYLDLLAHNTQLFALKAATHSHTQASEVAVLGPSPSFGLQ DVFRLPPLLWSVQAFTVDLQGESCTSWLTRLIKSTVLNGHQRRSHLAAPA EQRLGLDGLFPSVECQTLFLPATSRPSLHRLAALPPSQLSPDFLADVDSL LTRVLASLQPKTHRSSEAQEGDPAPLPLSGAGLAALLHLVVDGLNQGQLW SIPSRWSSFSSHLRLSSVRAAVSHFESEVTLGFRNATPPLPAPEMASLVR RVRREATELVPRLLVGLERGSVREAVREVEAHVRELAYKLTRSNEGQVRG FLRSTREALLAGDAADADTFQSNGLPVTSSALKDWGKAREEALGATFQAQ VGPYRDEGKFVTEARELHAQSRLHTEKVREANAEALTQLLSSTESVCLTA YEASVAAALSPALPPVLPAALESFHLPALANATGACLEGGAAAAFREETK FKATVASLSKAAVAHYQGLREANSARLDAHCQAARATLLEEVRAALGMGQ AGEKGIWKGKGKGKTGSADPRTATDEAALEAAVDRADALQKSYPDKVEPF GVTSECQVHARALEGEVAGLVEEAREEVAAALKAALQVPLQEICKVVVEA KCPAIYSARGLRATVQGECGKWVRRHDAVGAALSPRMLKRVLLRFIDEEL GECHAQVKEREVEWRKRWVRLGMTVLVVVSATLVLMLLGAMGKLPAMVME EGEEGERDGVMSMEGEYEKEGLSGMLGVSSPTLARRRRRSSILGLLSPYK GK back to topmRNA from alignment at CM002465.1:1048482..1051845- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5458 ID=rna5458|Name=rna5458|organism=Nannochloropsis gaditana|type=mRNA|length=3364bp|location=Sequence derived from alignment at CM002465.1:1048482..1051845- (Nannochloropsis gaditana) CTTGAACCTTGTGGTCGGACTAGGCCACCTTACATCCCGCTTGGTCACCT
CCTGACTTCATCAATAATTCATTTTCAACCAGATCCCTCAACCGCGAGCC
CAAGCCTACGATGTGGCCTCTTTTATCTGTCTTCGTCCTCCTTCTTCTCA
TCGGGGCCTCCGGGCTTTCCGCCAGGGGCATTACACAGCTCAGGGAATCA
TCCCCCCTCCAAAATCCTTTTCAATTGCTCGCCCCTGCGGATGCCTCACG
CACCAGCCTGGTGATCATGGAGGAGGGCATCCAGGTGCTTGAGTCACTCG
AGGGCCCCGTCGCGGTAGTTGCTGTGGTGGGGCCGTACCATACGGGCAAG
AGTTTTTTGCTGAACAACCTGGTTCGAGGCCTGAAAGCGCGGCGCGCGTC
CGAGACCGACACAGGGGACAAGGTAGCCGAAAGCGAGGAATCATGCCTTA
ATCCCGACAATACGACGACGTTCGGAGTCTTTGAGGTGGGAAAATCCGTG
GATCCGTCCACAGCGGGGGTATGGGCCTACCATCAGCGCGTGCGCCTTCC
GGCCCAGGAGGCTTACCCCTCCGCCGCCCCCCGGAAGGAGGAGGAGATCG
ATCTGCTCCTTCTCGACACGGAGGGCTTTGCTGTCGCGAACGTGAGTGAG
GCCTACGATGCCCAGATCTTCGCCGCCGCCACCGTACTGAGCAGTGTCTT
GGTTTACAACTCTATGCACCTGATCGACGCCAAGGAGCTCGAGTATCTGG
ACCTGCTGGCGCACAACACCCAGCTCTTCGCCCTCAAGGCCGCCACCCAC
TCCCACACACAGGCCTCAGAGGTTGCCGTTCTCGGCCCCTCTCCCTCCTT
CGGACTCCAAGACGTCTTCCGGCTTCCCCCCCTTCTCTGGTCCGTCCAGG
CCTTCACGGTCGACCTCCAGGGCGAGAGCTGCACCTCCTGGCTCACGCGC
CTCATCAAAAGCACCGTCCTCAACGGGCACCAACGCCGCTCCCACCTTGC
CGCCCCCGCGGAGCAGCGCCTGGGCTTGGACGGACTCTTCCCCTCTGTGG
AGTGCCAGACTCTCTTCCTCCCGGCCACCTCCCGCCCCTCCCTCCACCGC
CTCGCCGCCCTCCCGCCCTCCCAGCTCTCCCCTGACTTCCTCGCGGACGT
GGACAGCCTCCTTACCCGCGTCCTCGCCTCTCTCCAACCCAAGACGCACC
GAAGCTCCGAAGCCCAGGAGGGCGACCCCGCGCCCCTCCCTCTCTCCGGG
GCGGGGCTGGCCGCTCTGCTTCACCTCGTCGTCGACGGCTTGAATCAGGG
CCAGCTCTGGAGCATTCCCTCCCGCTGGTCCTCCTTCTCCTCCCATCTTC
GCCTCTCCTCCGTCCGCGCCGCCGTCTCCCATTTCGAAAGTGAAGTCACC
TTGGGCTTCCGGAACGCCACCCCACCCTTGCCCGCCCCGGAGATGGCGAG
CCTGGTCCGCCGGGTGCGCAGAGAGGCCACAGAGCTCGTTCCCCGCCTCC
TGGTGGGTTTGGAGCGAGGGAGCGTGCGCGAGGCCGTCCGGGAGGTGGAG
GCCCACGTGCGGGAGCTGGCATACAAGCTGACCCGGAGCAACGAGGGACA
AGTCCGGGGATTCCTGAGGTCGACCCGCGAGGCCCTGCTCGCGGGCGATG
CGGCGGACGCGGACACCTTCCAGAGCAACGGCCTCCCAGTGACCTCGTCC
GCCCTCAAGGACTGGGGCAAGGCGAGGGAGGAGGCGCTGGGCGCCACCTT
CCAGGCTCAAGTGGGGCCATACCGGGACGAAGGGAAGTTCGTGACCGAGG
CGCGGGAGCTCCACGCCCAAAGCCGGCTTCACACGGAAAAGGTCCGAGAA
GCGAATGCCGAGGCTCTCACACAGCTCCTGAGCAGTACGGAAAGCGTCTG
TCTGACCGCGTACGAGGCCTCCGTGGCGGCCGCCCTCAGTCCCGCTCTCC
CCCCCGTCCTCCCGGCCGCCCTCGAGTCTTTCCACCTCCCCGCTCTGGCG
AATGCCACGGGGGCGTGCCTGGAGGGGGGGGCCGCGGCGGCGTTCAGGGA
GGAAACCAAGTTCAAGGCGACGGTCGCGAGCCTGTCCAAGGCCGCTGTGG
CCCATTACCAGGGCCTGCGGGAAGCCAACAGCGCCCGCCTGGACGCGCAC
TGCCAAGCGGCCCGGGCGACTTTACTGGAGGAGGTACGGGCGGCGCTGGG
CATGGGACAGGCTGGGGAAAAGGGGATCTGGAAAGGGAAAGGGAAGGGGA
AGACGGGCAGCGCGGACCCCAGGACGGCCACGGACGAGGCGGCTCTGGAG
GCAGCGGTGGATCGAGCGGACGCCCTGCAGAAAAGCTACCCGGACAAAGT
GGAGCCGTTTGGGGTGACTAGCGAATGCCAAGTCCATGCGCGCGCGCTGG
AGGGAGAGGTAGCAGGCCTGGTGGAGGAGGCGAGGGAAGAGGTGGCGGCT
GCGCTGAAGGCTGCCCTGCAGGTGCCGCTGCAAGAGATCTGTAAGGTGGT
GGTGGAGGCCAAGTGCCCGGCGATTTACTCCGCCCGCGGCCTTCGCGCTA
CGGTGCAAGGCGAGTGCGGTAAATGGGTCAGGAGGCACGATGCCGTGGGG
GCCGCGCTCTCGCCCCGCATGCTGAAGCGGGTCCTGCTCCGCTTCATCGA
TGAGGAGCTGGGGGAGTGCCACGCGCAGGTGAAAGAGAGAGAGGTCGAGT
GGCGAAAGCGATGGGTGCGGTTGGGCATGACAGTTCTGGTTGTCGTCTCT
GCCACGCTCGTTCTCATGCTTCTCGGAGCTATGGGCAAGCTTCCAGCGAT
GGTGATGGAGGAAGGGGAGGAAGGGGAACGTGACGGGGTGATGAGTATGG
AGGGGGAGTACGAAAAAGAGGGATTGAGTGGCATGTTGGGCGTGAGTTCC
CCCACCCTGGCTCGACGACGACGTCGCAGTAGTATTCTGGGATTGCTCTC
TCCTTACAAAGGTAAGTAGGAGTGAAATATCCGTGGTCACTGTCAATATC
TCGTCGAGAAAGAACAACGAGGAGCTGGCATCGGAAAGTCTGGGAAGAGT
AATAAAAGCGCAGATTAAATTGAAATGAGGCGAAAAGTTGCATATATTGT
CATTGTCAATGTGGCATCAAAACAGTTCGTTCGAGAAAAGGGGAGCACAA
TCGACTAGAAAAAAAGTGAATTGTAAGGAGACCAGTGGAAAGCTTTAAGG
AATCAAGGGGTGTGTGGTTCAGTGAGTCTGAGTGAAAAAAAATGCTTCTG
TCCATTGTAACGTCATGAAATACACTTATTTTTTGCCCCTTCTTGCTTGT
TCTGCCTTCGACTTACATTTCAACAAAGCTTATTAAAAAGAAAAACAGCA
AGGGAAAGGATGGG back to topCoding sequence (CDS) from alignment at CM002465.1:1048482..1051845- >rna5458 ID=rna5458|Name=rna5458|organism=Nannochloropsis gaditana|type=CDS|length=2859bp|location=Sequence derived from alignment at CM002465.1:1048482..1051845- (Nannochloropsis gaditana) ATGTGGCCTCTTTTATCTGTCTTCGTCCTCCTTCTTCTCATCGGGGCCTC CGGGCTTTCCGCCAGGGGCATTACACAGCTCAGGGAATCATCCCCCCTCC AAAATCCTTTTCAATTGCTCGCCCCTGCGGATGCCTCACGCACCAGCCTG GTGATCATGGAGGAGGGCATCCAGGTGCTTGAGTCACTCGAGGGCCCCGT CGCGGTAGTTGCTGTGGTGGGGCCGTACCATACGGGCAAGAGTTTTTTGC TGAACAACCTGGTTCGAGGCCTGAAAGCGCGGCGCGCGTCCGAGACCGAC ACAGGGGACAAGGTAGCCGAAAGCGAGGAATCATGCCTTAATCCCGACAA TACGACGACGTTCGGAGTCTTTGAGGTGGGAAAATCCGTGGATCCGTCCA CAGCGGGGGTATGGGCCTACCATCAGCGCGTGCGCCTTCCGGCCCAGGAG GCTTACCCCTCCGCCGCCCCCCGGAAGGAGGAGGAGATCGATCTGCTCCT TCTCGACACGGAGGGCTTTGCTGTCGCGAACGTGAGTGAGGCCTACGATG CCCAGATCTTCGCCGCCGCCACCGTACTGAGCAGTGTCTTGGTTTACAAC TCTATGCACCTGATCGACGCCAAGGAGCTCGAGTATCTGGACCTGCTGGC GCACAACACCCAGCTCTTCGCCCTCAAGGCCGCCACCCACTCCCACACAC AGGCCTCAGAGGTTGCCGTTCTCGGCCCCTCTCCCTCCTTCGGACTCCAA GACGTCTTCCGGCTTCCCCCCCTTCTCTGGTCCGTCCAGGCCTTCACGGT CGACCTCCAGGGCGAGAGCTGCACCTCCTGGCTCACGCGCCTCATCAAAA GCACCGTCCTCAACGGGCACCAACGCCGCTCCCACCTTGCCGCCCCCGCG GAGCAGCGCCTGGGCTTGGACGGACTCTTCCCCTCTGTGGAGTGCCAGAC TCTCTTCCTCCCGGCCACCTCCCGCCCCTCCCTCCACCGCCTCGCCGCCC TCCCGCCCTCCCAGCTCTCCCCTGACTTCCTCGCGGACGTGGACAGCCTC CTTACCCGCGTCCTCGCCTCTCTCCAACCCAAGACGCACCGAAGCTCCGA AGCCCAGGAGGGCGACCCCGCGCCCCTCCCTCTCTCCGGGGCGGGGCTGG CCGCTCTGCTTCACCTCGTCGTCGACGGCTTGAATCAGGGCCAGCTCTGG AGCATTCCCTCCCGCTGGTCCTCCTTCTCCTCCCATCTTCGCCTCTCCTC CGTCCGCGCCGCCGTCTCCCATTTCGAAAGTGAAGTCACCTTGGGCTTCC GGAACGCCACCCCACCCTTGCCCGCCCCGGAGATGGCGAGCCTGGTCCGC CGGGTGCGCAGAGAGGCCACAGAGCTCGTTCCCCGCCTCCTGGTGGGTTT GGAGCGAGGGAGCGTGCGCGAGGCCGTCCGGGAGGTGGAGGCCCACGTGC GGGAGCTGGCATACAAGCTGACCCGGAGCAACGAGGGACAAGTCCGGGGA TTCCTGAGGTCGACCCGCGAGGCCCTGCTCGCGGGCGATGCGGCGGACGC GGACACCTTCCAGAGCAACGGCCTCCCAGTGACCTCGTCCGCCCTCAAGG ACTGGGGCAAGGCGAGGGAGGAGGCGCTGGGCGCCACCTTCCAGGCTCAA GTGGGGCCATACCGGGACGAAGGGAAGTTCGTGACCGAGGCGCGGGAGCT CCACGCCCAAAGCCGGCTTCACACGGAAAAGGTCCGAGAAGCGAATGCCG AGGCTCTCACACAGCTCCTGAGCAGTACGGAAAGCGTCTGTCTGACCGCG TACGAGGCCTCCGTGGCGGCCGCCCTCAGTCCCGCTCTCCCCCCCGTCCT CCCGGCCGCCCTCGAGTCTTTCCACCTCCCCGCTCTGGCGAATGCCACGG GGGCGTGCCTGGAGGGGGGGGCCGCGGCGGCGTTCAGGGAGGAAACCAAG TTCAAGGCGACGGTCGCGAGCCTGTCCAAGGCCGCTGTGGCCCATTACCA GGGCCTGCGGGAAGCCAACAGCGCCCGCCTGGACGCGCACTGCCAAGCGG CCCGGGCGACTTTACTGGAGGAGGTACGGGCGGCGCTGGGCATGGGACAG GCTGGGGAAAAGGGGATCTGGAAAGGGAAAGGGAAGGGGAAGACGGGCAG CGCGGACCCCAGGACGGCCACGGACGAGGCGGCTCTGGAGGCAGCGGTGG ATCGAGCGGACGCCCTGCAGAAAAGCTACCCGGACAAAGTGGAGCCGTTT GGGGTGACTAGCGAATGCCAAGTCCATGCGCGCGCGCTGGAGGGAGAGGT AGCAGGCCTGGTGGAGGAGGCGAGGGAAGAGGTGGCGGCTGCGCTGAAGG CTGCCCTGCAGGTGCCGCTGCAAGAGATCTGTAAGGTGGTGGTGGAGGCC AAGTGCCCGGCGATTTACTCCGCCCGCGGCCTTCGCGCTACGGTGCAAGG CGAGTGCGGTAAATGGGTCAGGAGGCACGATGCCGTGGGGGCCGCGCTCT CGCCCCGCATGCTGAAGCGGGTCCTGCTCCGCTTCATCGATGAGGAGCTG GGGGAGTGCCACGCGCAGGTGAAAGAGAGAGAGGTCGAGTGGCGAAAGCG ATGGGTGCGGTTGGGCATGACAGTTCTGGTTGTCGTCTCTGCCACGCTCG TTCTCATGCTTCTCGGAGCTATGGGCAAGCTTCCAGCGATGGTGATGGAG GAAGGGGAGGAAGGGGAACGTGACGGGGTGATGAGTATGGAGGGGGAGTA CGAAAAAGAGGGATTGAGTGGCATGTTGGGCGTGAGTTCCCCCACCCTGG CTCGACGACGACGTCGCAGTAGTATTCTGGGATTGCTCTCTCCTTACAAA GGTAAGTAG back to top
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