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Properties
Property Name | Value |
Product | Transmembrane transporter protein, chloroquine resistant |
Orig transcript id | gnl|cribi|Naga_100089g10.9636.mrna |
Orig protein id | gnl|cribi|Naga_100089g10.9636 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002465.1 | supercontig | CM002465.1:1044353..1046381 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5457 ID=rna5457|Name=rna5457|organism=Nannochloropsis gaditana|type=mRNA|length=1081bp AGACGGAGCTTAGTCTCTATAAATTGACTTATGCTTGAGAAAAGCAGGGA GGCAGCTGCAGCCCACTTCGCGTTGAAGACGCGACTGTCATGCACAAAAC AACCCAAACAACTTCTTTCTGCATTTGCTAGTAGAATTGATCATAGTTGT GATGAGTTTTAACTTATGTACTCGAAAGGCGCGTGCGAAGAGCGTGGAAG GCAATGTTTCCTTTGACGCATACGTGGGGGCGTACAGCTTTTTTTAATGT TCCTGCAGTAGCCCTGTTATCGTCTCGCTAGCATCATGCCGGTGCCTCCG TGCGGCACGCCTGGTTATCTTTCTCTTTGACAAATGCTTGGCGGCCCTTT CTCCCGACTAACACACATTTCATTCATAGTGCATTGGCGGTGCATGCGTC AGCTTTTTCTGTCAACACCTTGCGTGGTCCTTGTTGCCGTAAGCGCAGCT TTCCAAGTGTCCTTCTCCCCTGCTGCACTATCTACCTCTTATTGCCAGAG CATGAGCGAATCTGCTCCTGAAGTCAGCCCGCCCTCGTGCACTCGTGACG CAAAAAAGCATTGCGTTCCGTGCGAAGGAGGACTTCCAGCGTTGTCGATC GAGCGCGTGCAAGCCGTCCTCCCCTCACTCCCTTTGTGGCGTCTAAGTAA AGATCATAAGCGACTCTCTCGTTCTTTCACGGCCAAAAATTTCGCCGCTG CCCTTGCTTTTATAGATGCAGTAGGAGCTGTCGCTGAGTGCGAAGGCCAC CACCCAGACTTACACCTGACGAGCTACAGGGAAGTAGAAGTGGTCTTGTA CACACACGCGGTAGGAGGTTTGACCGAGAACGATCTGATTATGGCTGCAT TGATCGATACAGTACCTGCCTCATACAGCCCCAAATGGCTGAAAGAACAT CCGGAGGCTGGAAAAAGTGCAGCACGATAGAGCATGTGAAGAAAAAATGA AAGGATTTTGGATGAGATATGTATGGATGGAAAAGGTAGACTTAAAAAGG ACAATGAGCAAAAGAAATGGGTATAAGAGAACTCCGATCCCGCAGACGAA TTACAAAATGAGATGTCGTATAAGATTCGTC back to topprotein sequence of rna5457 >rna5457-protein ID=rna5457-protein|Name=rna5457|organism=Nannochloropsis gaditana|type=polypeptide|length=484bp MISEVTEFSRDATAMSEYGSFAKKTRVGAATGGPVAKCPSILSLALLVVL TLGSCNALVYKIMYQVYGSDGAFFVSTGVNVLYIIYGGLLLYPRMLFTDS ITPAMKALPKRRFIIMGFLDCCGTFLAAMGAVYTPGSVQTLLNQTLIPTT MIVSACFLRTHFSNVQLAGAALVLMGAAVTVLPAFITAESDSNNGHGASP SQSRWYANLVFFASNLPVACSQVYKERAFKRDSVDVLYLTQWVSVFQFFF GLALAPLQALPGIGSAHGVPLSSIPTAFLESWDCFLEKPTSVCHGQWPAP SLLLLAFCAVNLVFNTGGLYVSKHGSAVLNVITYAVLLPVTTLIFSLRPL MGAFTEPLSASTVLGLLLVLLGFYLYQEPMLWLGRRDHGKGVDGGDEKGK VLREGLKEDGGGAQTVEEEEEEEEEEEDEEEQGTMGIHVPSFQERVVAGL GPAIYQAHTQGHPYQLVPPMVNVGVSDASIFNVE back to topmRNA from alignment at CM002465.1:1044353..1046381- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5457 ID=rna5457|Name=rna5457|organism=Nannochloropsis gaditana|type=mRNA|length=2029bp|location=Sequence derived from alignment at CM002465.1:1044353..1046381- (Nannochloropsis gaditana) GCGGTACTTCCTTACCATCGTATTCTTGTCTTATTTGAGCCTATTCCACA
GTGATAACAGCATTCTTTCATTACACATATTGAAATTATAAATCTTCGGC
TTTTATCGTTGAAGTTTTCAGTAGAATGATCTCAGAAGTGACGGAGTTTT
CAAGAGATGCTACCGCGATGTCTGAGGTACGTTTCTTCATGCCATGTTAG
GGTTACCGCATTGAAACGTCTGATTATATTCACTCGGAGTGATGCCTCTT
TATTGTGACAATTTCTTACCTTTGCATGATTATGGGCAGTACGGAAGTTT
TGCGAAGAAAACCAGAGTCGGAGCTGCAACGGGCGGGCCTGTAGCAAAGT
GTCCATCTATCCTGTCACTCGCTCTTCTCGTGGTCCTCACACTGGGATCA
TGTAATGCTTTGGTGTATAAAATCATGTACCAAGTCTATGGTTCTGATGG
CGCGTTTTTTGTTTCGACGGGCGTCAACGTTTTGTACATTATCTACGGCG
GGCTTTTGCTGTACCCTCGGATGCTTTTCACTGATAGCATCACGCCCGCT
ATGAAAGCCCTGCCGAAGCGCCGATTCATAATAATGGGATTCCTCGACTG
TTGCGGCACATTTCTTGCGGCGATGGGTGCCGTCTATACGCCAGGGAGTG
TGCAAACCCTCCTGAACCAGACGCTCATCCCGACCACCATGATCGTCTCA
GCCTGCTTCTTGAGGACACACTTCTCCAACGTCCAATTAGCAGGGGCGGC
CCTGGTTCTGATGGGGGCCGCGGTCACTGTCCTGCCTGCCTTTATCACGG
CGGAGAGCGATAGCAACAATGGGCATGGAGCGAGCCCTTCTCAATCTCGG
TGGTACGCGAACCTGGTCTTTTTCGCCAGCAACCTCCCAGTGGCGTGCTC
CCAAGTGGTAGGGCTCCTGGGTTGGGATCTCACTTGCGTGTCACTTGCGT
GGATATCGATGGGAATTTGTAACGAGGGGCGCGAGTGGATGCACCAAACT
CGTCTCCATTTTCACCTCGTCTTTACCTTGATGGCCATGCACCTTTCATT
AGCCGGGGAAGAGGAGCGAAAGCGCCGCGAAGCAACAATCTCTCATCCCC
CTCCTTCTACTATCTTTTTTTTCGCACGCCTCCCCTAGTACAAGGAGAGG
GCCTTCAAGCGGGACAGCGTTGATGTCCTGTACCTGACCCAATGGGTGTC
TGTCTTCCAGTTCTTCTTCGGCCTGGCCCTTGCTCCTCTTCAAGCCCTCC
CTGGCATCGGCAGCGCCCACGGCGTCCCTCTCTCCTCCATCCCCACCGCA
TTCCTCGAAAGCTGGGACTGCTTCCTGGAGAAACCCACCTCCGTGTGTCA
CGGTCAGTGGCCCGCCCCCTCCCTCCTCCTGCTCGCCTTCTGCGCAGTCA
ACCTTGTCTTCAACACGGGAGGACTCTACGTCTCTAAGCACGGCTCCGCT
GTTCTCAACGTGATCACCTACGCGGTTCTTCTCCCCGTGACCACCCTCAT
CTTCTCTTTACGGCCCCTCATGGGTGCCTTCACAGAGCCCCTGTCGGCGA
GCACGGTGTTGGGCTTGCTCCTGGTGCTCCTGGGATTTTATCTCTATCAA
GAGCCAATGCTATGGCTGGGGAGACGCGACCACGGAAAAGGCGTAGATGG
GGGGGACGAAAAGGGTAAGGTGCTCAGGGAAGGACTGAAAGAGGACGGAG
GGGGAGCGCAGACGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GATGAGGAGGAGCAAGGCACTATGGGCATACACGTGCCTTCCTTTCAGGA
GCGTGTGGTGGCAGGCTTGGGTCCAGCCATCTATCAGGCTCATACACAGG
GGCATCCCTACCAGTTGGTGCCTCCAATGGTGAATGTAGGGGTCTCTGAT
GCTTCCATTTTTAATGTGGAGTGATGGGGAAGTTGTACAGAGCATGTAAA
GCAACAGGACAGAAACGCAGCGTATACAGCGCTATCACATTTTCTAAGAC
GAATCTTATACGACATCTCATTTTGTAAT back to topCoding sequence (CDS) from alignment at CM002465.1:1044353..1046381- >rna5457 ID=rna5457|Name=rna5457|organism=Nannochloropsis gaditana|type=CDS|length=4365bp|location=Sequence derived from alignment at CM002465.1:1044353..1046381- (Nannochloropsis gaditana) TACAAGGAGAGGGCCTTCAAGCGGGACAGCGTTGATGTCCTGTACCTGAC CCAATGGGTGTCTGTCTTCCAGTTCTTCTTCGGCCTGGCCCTTGCTCCTC TTCAAGCCCTCCCTGGCATCGGCAGCGCCCACGGCGTCCCTCTCTCCTCC ATCCCCACCGCATTCCTCGAAAGCTGGGACTGCTTCCTGGAGAAACCCAC CTCCGTGTGTCACGGTCAGTGGCCCGCCCCCTCCCTCCTCCTGCTCGCCT TCTGCGCAGTCAACCTTGTCTTCAACACGGGAGGACTCTACGTCTCTAAG CACGGCTCCGCTGTTCTCAACGTGATCACCTACGCGGTTCTTCTCCCCGT GACCACCCTCATCTTCTCTTTACGGCCCCTCATGGGTGCCTTCACAGAGC CCCTGTCGGCGAGCACGGTGTTGGGCTTGCTCCTGGTGCTCCTGGGATTT TATCTCTATCAAGAGCCAATGCTATGGCTGGGGAGACGCGACCACGGAAA AGGCGTAGATGGGGGGGACGAAAAGGGTAAGGTGCTCAGGGAAGGACTGA AAGAGGACGGAGGGGGAGCGCAGACGGTGGAGGAGGAGGAGGAGGAGGAG GAGGAGGAGGAGGATGAGGAGGAGCAAGGCACTATGGGCATACACGTGCC TTCCTTTCAGGAGCGTGTGGTGGCAGGCTTGGGTCCAGCCATCTATCAGG CTCATACACAGGGGCATCCCTACCAGTTGGTGCCTCCAATGGTGAATGTA GGGGTCTCTGATGCTTCCATTTTTAATGTGGAGTGATACGGAAGTTTTGC GAAGAAAACCAGAGTCGGAGCTGCAACGGGCGGGCCTGTAGCAAAGTGTC CATCTATCCTGTCACTCGCTCTTCTCGTGGTCCTCACACTGGGATCATGT AATGCTTTGGTGTATAAAATCATGTACCAAGTCTATGGTTCTGATGGCGC GTTTTTTGTTTCGACGGGCGTCAACGTTTTGTACATTATCTACGGCGGGC TTTTGCTGTACCCTCGGATGCTTTTCACTGATAGCATCACGCCCGCTATG AAAGCCCTGCCGAAGCGCCGATTCATAATAATGGGATTCCTCGACTGTTG CGGCACATTTCTTGCGGCGATGGGTGCCGTCTATACGCCAGGGAGTGTGC AAACCCTCCTGAACCAGACGCTCATCCCGACCACCATGATCGTCTCAGCC TGCTTCTTGAGGACACACTTCTCCAACGTCCAATTAGCAGGGGCGGCCCT GGTTCTGATGGGGGCCGCGGTCACTGTCCTGCCTGCCTTTATCACGGCGG AGAGCGATAGCAACAATGGGCATGGAGCGAGCCCTTCTCAATCTCGGTGG TACGCGAACCTGGTCTTTTTCGCCAGCAACCTCCCAGTGGCGTGCTCCCA AGTGATGATCTCAGAAGTGACGGAGTTTTCAAGAGATGCTACCGCGATGT CTGAGTACAAGGAGAGGGCCTTCAAGCGGGACAGCGTTGATGTCCTGTAC CTGACCCAATGGGTGTCTGTCTTCCAGTTCTTCTTCGGCCTGGCCCTTGC TCCTCTTCAAGCCCTCCCTGGCATCGGCAGCGCCCACGGCGTCCCTCTCT CCTCCATCCCCACCGCATTCCTCGAAAGCTGGGACTGCTTCCTGGAGAAA CCCACCTCCGTGTGTCACGGTCAGTGGCCCGCCCCCTCCCTCCTCCTGCT CGCCTTCTGCGCAGTCAACCTTGTCTTCAACACGGGAGGACTCTACGTCT CTAAGCACGGCTCCGCTGTTCTCAACGTGATCACCTACGCGGTTCTTCTC CCCGTGACCACCCTCATCTTCTCTTTACGGCCCCTCATGGGTGCCTTCAC AGAGCCCCTGTCGGCGAGCACGGTGTTGGGCTTGCTCCTGGTGCTCCTGG GATTTTATCTCTATCAAGAGCCAATGCTATGGCTGGGGAGACGCGACCAC GGAAAAGGCGTAGATGGGGGGGACGAAAAGGGTAAGGTGCTCAGGGAAGG ACTGAAAGAGGACGGAGGGGGAGCGCAGACGGTGGAGGAGGAGGAGGAGG AGGAGGAGGAGGAGGAGGATGAGGAGGAGCAAGGCACTATGGGCATACAC GTGCCTTCCTTTCAGGAGCGTGTGGTGGCAGGCTTGGGTCCAGCCATCTA TCAGGCTCATACACAGGGGCATCCCTACCAGTTGGTGCCTCCAATGGTGA ATGTAGGGGTCTCTGATGCTTCCATTTTTAATGTGGAGTGATACGGAAGT TTTGCGAAGAAAACCAGAGTCGGAGCTGCAACGGGCGGGCCTGTAGCAAA GTGTCCATCTATCCTGTCACTCGCTCTTCTCGTGGTCCTCACACTGGGAT CATGTAATGCTTTGGTGTATAAAATCATGTACCAAGTCTATGGTTCTGAT GGCGCGTTTTTTGTTTCGACGGGCGTCAACGTTTTGTACATTATCTACGG CGGGCTTTTGCTGTACCCTCGGATGCTTTTCACTGATAGCATCACGCCCG CTATGAAAGCCCTGCCGAAGCGCCGATTCATAATAATGGGATTCCTCGAC TGTTGCGGCACATTTCTTGCGGCGATGGGTGCCGTCTATACGCCAGGGAG TGTGCAAACCCTCCTGAACCAGACGCTCATCCCGACCACCATGATCGTCT CAGCCTGCTTCTTGAGGACACACTTCTCCAACGTCCAATTAGCAGGGGCG GCCCTGGTTCTGATGGGGGCCGCGGTCACTGTCCTGCCTGCCTTTATCAC GGCGGAGAGCGATAGCAACAATGGGCATGGAGCGAGCCCTTCTCAATCTC GGTGGTACGCGAACCTGGTCTTTTTCGCCAGCAACCTCCCAGTGGCGTGC TCCCAAGTGATGATCTCAGAAGTGACGGAGTTTTCAAGAGATGCTACCGC GATGTCTGAGTACAAGGAGAGGGCCTTCAAGCGGGACAGCGTTGATGTCC TGTACCTGACCCAATGGGTGTCTGTCTTCCAGTTCTTCTTCGGCCTGGCC CTTGCTCCTCTTCAAGCCCTCCCTGGCATCGGCAGCGCCCACGGCGTCCC TCTCTCCTCCATCCCCACCGCATTCCTCGAAAGCTGGGACTGCTTCCTGG AGAAACCCACCTCCGTGTGTCACGGTCAGTGGCCCGCCCCCTCCCTCCTC CTGCTCGCCTTCTGCGCAGTCAACCTTGTCTTCAACACGGGAGGACTCTA CGTCTCTAAGCACGGCTCCGCTGTTCTCAACGTGATCACCTACGCGGTTC TTCTCCCCGTGACCACCCTCATCTTCTCTTTACGGCCCCTCATGGGTGCC TTCACAGAGCCCCTGTCGGCGAGCACGGTGTTGGGCTTGCTCCTGGTGCT CCTGGGATTTTATCTCTATCAAGAGCCAATGCTATGGCTGGGGAGACGCG ACCACGGAAAAGGCGTAGATGGGGGGGACGAAAAGGGTAAGGTGCTCAGG GAAGGACTGAAAGAGGACGGAGGGGGAGCGCAGACGGTGGAGGAGGAGGA GGAGGAGGAGGAGGAGGAGGAGGATGAGGAGGAGCAAGGCACTATGGGCA TACACGTGCCTTCCTTTCAGGAGCGTGTGGTGGCAGGCTTGGGTCCAGCC ATCTATCAGGCTCATACACAGGGGCATCCCTACCAGTTGGTGCCTCCAAT GGTGAATGTAGGGGTCTCTGATGCTTCCATTTTTAATGTGGAGTGATACG GAAGTTTTGCGAAGAAAACCAGAGTCGGAGCTGCAACGGGCGGGCCTGTA GCAAAGTGTCCATCTATCCTGTCACTCGCTCTTCTCGTGGTCCTCACACT GGGATCATGTAATGCTTTGGTGTATAAAATCATGTACCAAGTCTATGGTT CTGATGGCGCGTTTTTTGTTTCGACGGGCGTCAACGTTTTGTACATTATC TACGGCGGGCTTTTGCTGTACCCTCGGATGCTTTTCACTGATAGCATCAC GCCCGCTATGAAAGCCCTGCCGAAGCGCCGATTCATAATAATGGGATTCC TCGACTGTTGCGGCACATTTCTTGCGGCGATGGGTGCCGTCTATACGCCA GGGAGTGTGCAAACCCTCCTGAACCAGACGCTCATCCCGACCACCATGAT CGTCTCAGCCTGCTTCTTGAGGACACACTTCTCCAACGTCCAATTAGCAG GGGCGGCCCTGGTTCTGATGGGGGCCGCGGTCACTGTCCTGCCTGCCTTT ATCACGGCGGAGAGCGATAGCAACAATGGGCATGGAGCGAGCCCTTCTCA ATCTCGGTGGTACGCGAACCTGGTCTTTTTCGCCAGCAACCTCCCAGTGG CGTGCTCCCAAGTGATGATCTCAGAAGTGACGGAGTTTTCAAGAGATGCT ACCGCGATGTCTGAG back to top
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