|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100089g4.9648.mrna |
| Orig protein id | gnl|cribi|Naga_100089g4.9648 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:1030706..1031958 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5451 ID=rna5451|Name=rna5451|organism=Nannochloropsis gaditana|type=mRNA|length=549bp
ATGGCAAGTGCGTCACCCCCGGCTGTGGCATCGTCCTCGCTGGCTCCCTC
TGGGGAGAAAAGAGAGAGGATGAAGGAGAGAGAGAGGGAGGGGAGCGAGG
CGATGGTGGCGGATTGGATGGGCAGAGAAGGGCTCGGAAAGCGCTTAAAG
TGGAAGATTAGAAGCCTCCTCGCGGCCTGCCTCTCCGCCCTCCTCTTCGT
GGCGGGCATACAAGTCGCCCAGGCCCTCTTGATGGAGGGACCTGAAGGCC
TGAAAGACGTCCCGAGAAACATCATGCTTCTCCTCCGGGGCATTCAAATG
GGGGTCATGAAGCTAAGCGAGGGCCTCGTCGACCTCTACCGCTCGGACTT
GTCACATCGGATTCGAGCAGCCTTCTCTACTGCTGCGGCTACGGCTGTCG
CTGCCGCCACGGGGAGGGGGAACGACACACAGGAACAGAAATGCACGCTG
GATGCAGGCAATGTCCAGAGTCTTGCCGCAGAAGGGTGGGAGAAAGCCGG
CGAGAGAGAAGGGGAAGGATTGCGGGAGACGAGAGAAGGTCTCTGGTGA back to topprotein sequence of rna5451 >rna5451-protein ID=rna5451-protein|Name=rna5451|organism=Nannochloropsis gaditana|type=polypeptide|length=146bp
MANSVLLASALLCGAFHIWVLTVSQVNTSTKAWTCAVIGGILTSIWNHAS
TSELAKWLDRCTIAVGVCLDVYILSSATPNQMSRESVLALGGCCTTLLAA
LGLYFTAKSFEHTCWKRRDACHVGAHVLATILHACMATLLVVPVAE back to topmRNA from alignment at CM002465.1:1030706..1031958- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5451 ID=rna5451|Name=rna5451|organism=Nannochloropsis gaditana|type=mRNA|length=1253bp|location=Sequence derived from alignment at CM002465.1:1030706..1031958- (Nannochloropsis gaditana)
CTGTCTATTGTGTCCTACTTCTCGCTGAAGGGGAGATAAAACGGATTAGT
GAGATGCTTACCCAACTGCGAGCTCGAGCGGCCCGTAATTATATATTATG
AGGGCGATAGAAAATCCATTTATACAGCTCTGCATTCACCTATTTCTTAT
TTAACCCTCAGGATAGACGGATGACTAGTCGTATGTCTATTTTATCATTC
ATGACACGGCTGATTCATCCCACCGTAAGTTCCTTCTCGTCCGCGCAATT
AATGTTACAAGTGGTTATCAATCAAAACGATCACAGGGATGGCAAACAGC
GTCCTCCTTGCCTCGGCCCTTCTCTGTGGTGCGTTCCACATCTGGGTGTT
GACAGTTTCTCAAGTGAATACTTCTACGAAGGCATGGACATGCGCGGTAA
TAGGCGGCATTCTCACATCTATATGGAACCATGCCTCCACTTCCGAGCTG
GCCAAGTGGCTTGATCGTTGCACTATAGCTGTAGGAGTATGTCTTGATGT
CTACATCCTGTCATCAGCAACACCCAATCAGATGTCAAGGGAAAGTGTAC
TTGCCCTGGGAGGGTGTTGTACTACTCTTTTGGCGGCGTTAGGCTTGTAT
TTTACAGCAAAAAGCTTCGAACACACGTGTTGGAAAAGACGAGATGCGTG
CCATGTAGGTGCGCATGTGCTAGCCACGATTTTGCATGCCTGCATGGCCA
CTTTGCTAGTAGTCCCAGTGGCGGAATAGCGCTGGATGCAGAGCCGAGCG
AACTGTGGGTTATTCGCATCTTCCGCCCTGACTTTGTACCTACGTTCATG
CCATGTGACCCCTTTAAATTGACAGAAAACCATAGGAGGCTCGAAATTAA
GAAAATTGCGCGCTGTGTATTTTTCTAGCACATTGCCTGCTGCTCCATCG
TCTGGAACTTCCCTTGAGGAGACTCCTAGATTCATGCAAGGGGGATGTAG
CGAAAAATAAAGTTAACATAGTAGCCAGGGTATAGCTCAAGAACGGTGAT
ACCGTGATGTACGAAAAAACCATGAAATGCACACACGAGAGGAATATTTG
ATGAGTATAAACCGACACGTGGGCCTCTGTAGATACGGGAGACGCGTCCA
CAAAGGTGGATATTTTGAAATGAGTGTAAATTACAGGATGAGGGAGAGAT
TTCATTACAAGCCTTTTTTCCAGGAAAAATTGAACATTTAAATTAACATT
GAGAATCAGGCTCCCTACTTTCAAGCCAAAAAAAGTATGAAAGCTCCACA
CGA back to topCoding sequence (CDS) from alignment at CM002465.1:1030706..1031958- >rna5451 ID=rna5451|Name=rna5451|organism=Nannochloropsis gaditana|type=CDS|length=441bp|location=Sequence derived from alignment at CM002465.1:1030706..1031958- (Nannochloropsis gaditana)
ATGGCAAACAGCGTCCTCCTTGCCTCGGCCCTTCTCTGTGGTGCGTTCCA
CATCTGGGTGTTGACAGTTTCTCAAGTGAATACTTCTACGAAGGCATGGA
CATGCGCGGTAATAGGCGGCATTCTCACATCTATATGGAACCATGCCTCC
ACTTCCGAGCTGGCCAAGTGGCTTGATCGTTGCACTATAGCTGTAGGAGT
ATGTCTTGATGTCTACATCCTGTCATCAGCAACACCCAATCAGATGTCAA
GGGAAAGTGTACTTGCCCTGGGAGGGTGTTGTACTACTCTTTTGGCGGCG
TTAGGCTTGTATTTTACAGCAAAAAGCTTCGAACACACGTGTTGGAAAAG
ACGAGATGCGTGCCATGTAGGTGCGCATGTGCTAGCCACGATTTTGCATG
CCTGCATGGCCACTTTGCTAGTAGTCCCAGTGGCGGAATAG back to top
|