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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100677g2.7974.mrna |
| Orig protein id | gnl|cribi|Naga_100677g2.7974 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:922254..923534 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5403 ID=rna5403|Name=rna5403|organism=Nannochloropsis gaditana|type=mRNA|length=1134bp
ATGGTTGGGTACGAGAAACGGTATGATCAACGCTTTCTGCTCTTACCCCG
TTGGCCTCGAATAGCTGGAAACAGAACTCGGTTCTCAATCCCTGCAGCCA
TGGCCTCGGATCGAGGCACAGGTCCTGGCGTCCTCTTTGCTATCGACAAA
GGCGTGCAACAACTTATCTCGTCGCTCTCCGAGACCGGCGCCCGGTTGGG
GCGCGTGAGGGATGTCGACATCCATCGTCTCGGCTATTTGGTGGACCGGC
TCTTAGAAAGCCTCCACCACAACCTTCCCGAAGCCGAGCGCCTTCTGTAC
TCGTGGGCGGACACAATTTTTGCGCCAAAAGTGGTGCTGCGCCAGTATTT
GATGGCCTTGGGCTTGGAAATGACGCTCTTCATCTACCACCTGTGTTACC
GCCTGGGCGCGCGCCTGGTGAATCGGATGACCGTAAAAGGCCGACAAATC
TCCGAGACTCGTCGGAGAATGGCCAAGGCGAAGAACTACTACGAATGGCT
GAAATGCGCGGAGCGGATGGACGAGTTGGAAGGGAAGAACCGGTGGCGGG
AGGTTCCGGAGAGCACCCTCTACAACCATCGCATGCTCCAAGAGAAGATC
AATCAGTTCAACAACATGATGCAAAATGGGGACGTGTTTCAGCTTATGTT
CGTCCTCCGGGGGGGGATCAGCCGGAACCAGTTCGGCCTCTTGAATGAGG
GCCTGTACCAGCATGCTTACTCCGGTACCAAGAAGATCGTGGAGCGATAC
CTGGAGGTGGTGGTGAAAGCCTTGAATTTCGTGTGCGACGTGAACCCCAG
CCTCGACAACATTAGCGCGGACGTAAAACTCGCGTTTTTCAACGAGACAC
GCCATGCCTTTGGACGCACCGCCTTGTTGCTGAGTGGGGGGGCGGGGCTC
GGATTCTACCATGTCGGTTTCGTCAAGGCTCTCTTTGATCAGGGCATCCT
CCCCAGGGTCCTCTCCGGGGCCTCGGCGGGGTCCATCATCTCCTCCATGA
TCGGCGTACGCACTGACGACGAACTCTACGCCATGTTCACGGATGGGATC
GCCCGCTTGGACTTCTTCAAACTCTACAAACGGAGGACGAAAGCGGCGGC
GGCGGCGACGGCCACTTCCGGCGCCGGTTGCTGA back to topprotein sequence of rna5403 >rna5403-protein ID=rna5403-protein|Name=rna5403|organism=Nannochloropsis gaditana|type=polypeptide|length=406bp
MGGRQRQSEDEEEGREEEEEEEREKKVEEGGEATIVTSRSIAEKEEDHGG
KVKGRDGKEEGEKVQAEEEEEEEEEEEEEEGKGAREVSLLGLGGVEEKNP
EAREEICATGKKSKEEEAQEKARGGEEVEGEGKGGKTGRDEEEEEGQGVD
GWKESVQGDGNGGRGLGEREKREGGEGNIDGKERKEVEAPGGGGTKRREG
SGTREGGTGSSSVSTASSNAHFEFPLSRDIIAAATALSGRTGNVEGKGKK
GGGREGGGLAPNPEREERRTGAEGFDPDKPMVIYVVSPFLPEVTVKIRGR
AKVKKLTSAIYRLFCAHVPSERLVFEGEGLKPSHLRFMLRRDQEIGEKAG
VMGIDDDGNGGNRKVEVTLDPAGYIGAQGVRDKSQIEVSISTPLVTENEA
RRRGRQ back to topmRNA from alignment at CM002465.1:922254..923534- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5403 ID=rna5403|Name=rna5403|organism=Nannochloropsis gaditana|type=mRNA|length=1281bp|location=Sequence derived from alignment at CM002465.1:922254..923534- (Nannochloropsis gaditana)
ATGGGAGGTAGGCAAAGGCAAAGCGAGGATGAGGAGGAGGGAAGGGAGGA
AGAGGAGGAAGAGGAAAGGGAAAAGAAGGTGGAGGAGGGAGGAGAAGCGA
CGATCGTGACGTCGAGGAGTATTGCCGAGAAGGAGGAGGACCACGGAGGG
AAAGTAAAGGGGAGGGATGGAAAGGAGGAGGGCGAGAAAGTGCAGGCGGA
GGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGGAAAAGGCG
CGCGAGAAGTTTCCCTCCTCGGGTTAGGAGGAGTCGAGGAGAAGAATCCG
GAGGCGAGAGAAGAGATCTGTGCGACGGGGAAGAAGTCGAAGGAGGAGGA
AGCGCAGGAGAAGGCAAGGGGGGGAGAGGAAGTGGAGGGGGAAGGAAAGG
GAGGGAAGACGGGGAGAGACGAGGAGGAAGAGGAGGGACAGGGAGTGGAC
GGTTGGAAGGAAAGCGTGCAAGGGGATGGAAATGGAGGAAGGGGTCTTGG
GGAACGAGAGAAGAGGGAAGGAGGGGAGGGGAACATTGATGGGAAGGAAA
GGAAGGAAGTAGAGGCGCCCGGAGGAGGAGGTACGAAAAGAAGGGAGGGG
AGCGGAACCAGGGAGGGTGGGACGGGCTCATCATCCGTTTCAACGGCTTC
TTCAAACGCTCATTTTGAATTTCCGTTAAGTCGTGATATAATTGCAGCCG
CGACGGCTTTGTCCGGACGCACGGGAAATGTCGAGGGGAAGGGAAAGAAG
GGAGGAGGCAGAGAAGGAGGAGGTTTGGCGCCGAACCCGGAGAGGGAAGA
GAGGAGAACGGGTGCGGAAGGCTTCGATCCGGATAAGCCCATGGTGATTT
ACGTTGTCAGCCCTTTCTTACCTGAGGTTACTGTCAAGATCCGTGGCCGA
GCCAAAGTGAAGAAGTTGACCTCGGCGATTTACCGGTTGTTCTGTGCGCA
CGTGCCCTCGGAGCGCCTTGTATTCGAAGGCGAAGGGTTGAAGCCTAGCC
ACTTAAGATTTATGCTCAGGCGGGACCAGGAGATTGGGGAGAAGGCAGGA
GTGATGGGGATTGATGATGATGGAAATGGAGGAAACAGGAAGGTGGAGGT
GACGTTAGACCCTGCCGGGTACATCGGTGCACAGGGTGTGCGAGATAAAA
GTCAGATTGAGGTGTCGATTTCCACGCCGCTGGTCACTGAGAACGAAGCG
AGAAGGAGGGGACGCCAGTGAGGTTGACGTCGTGCATGGTGGGAAAAGTA
TTCTATAGAAAATATCATCGGGTAACCTTGG back to topCoding sequence (CDS) from alignment at CM002465.1:922254..923534- >rna5403 ID=rna5403|Name=rna5403|organism=Nannochloropsis gaditana|type=CDS|length=1221bp|location=Sequence derived from alignment at CM002465.1:922254..923534- (Nannochloropsis gaditana)
ATGGGAGGTAGGCAAAGGCAAAGCGAGGATGAGGAGGAGGGAAGGGAGGA
AGAGGAGGAAGAGGAAAGGGAAAAGAAGGTGGAGGAGGGAGGAGAAGCGA
CGATCGTGACGTCGAGGAGTATTGCCGAGAAGGAGGAGGACCACGGAGGG
AAAGTAAAGGGGAGGGATGGAAAGGAGGAGGGCGAGAAAGTGCAGGCGGA
GGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGGAAAAGGCG
CGCGAGAAGTTTCCCTCCTCGGGTTAGGAGGAGTCGAGGAGAAGAATCCG
GAGGCGAGAGAAGAGATCTGTGCGACGGGGAAGAAGTCGAAGGAGGAGGA
AGCGCAGGAGAAGGCAAGGGGGGGAGAGGAAGTGGAGGGGGAAGGAAAGG
GAGGGAAGACGGGGAGAGACGAGGAGGAAGAGGAGGGACAGGGAGTGGAC
GGTTGGAAGGAAAGCGTGCAAGGGGATGGAAATGGAGGAAGGGGTCTTGG
GGAACGAGAGAAGAGGGAAGGAGGGGAGGGGAACATTGATGGGAAGGAAA
GGAAGGAAGTAGAGGCGCCCGGAGGAGGAGGTACGAAAAGAAGGGAGGGG
AGCGGAACCAGGGAGGGTGGGACGGGCTCATCATCCGTTTCAACGGCTTC
TTCAAACGCTCATTTTGAATTTCCGTTAAGTCGTGATATAATTGCAGCCG
CGACGGCTTTGTCCGGACGCACGGGAAATGTCGAGGGGAAGGGAAAGAAG
GGAGGAGGCAGAGAAGGAGGAGGTTTGGCGCCGAACCCGGAGAGGGAAGA
GAGGAGAACGGGTGCGGAAGGCTTCGATCCGGATAAGCCCATGGTGATTT
ACGTTGTCAGCCCTTTCTTACCTGAGGTTACTGTCAAGATCCGTGGCCGA
GCCAAAGTGAAGAAGTTGACCTCGGCGATTTACCGGTTGTTCTGTGCGCA
CGTGCCCTCGGAGCGCCTTGTATTCGAAGGCGAAGGGTTGAAGCCTAGCC
ACTTAAGATTTATGCTCAGGCGGGACCAGGAGATTGGGGAGAAGGCAGGA
GTGATGGGGATTGATGATGATGGAAATGGAGGAAACAGGAAGGTGGAGGT
GACGTTAGACCCTGCCGGGTACATCGGTGCACAGGGTGTGCGAGATAAAA
GTCAGATTGAGGTGTCGATTTCCACGCCGCTGGTCACTGAGAACGAAGCG
AGAAGGAGGGGACGCCAGTGA back to top
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