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Properties
Property Name | Value |
Product | obtusifoliol 14-alpha demethylase |
Orig transcript id | gnl|cribi|Naga_100403g3.9949.mrna |
Orig protein id | gnl|cribi|Naga_100403g3.9949 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002465.1 | supercontig | CM002465.1:911010..913219 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5397 ID=rna5397|Name=rna5397|organism=Nannochloropsis gaditana|type=mRNA|length=1394bp GCCACGGACAGAAGCCTGCAACAAGGTGCCCTCCCCGCCCAATGGCACGC TTTCCCCCTGCGCGAGGGCGGGGGCTGTCGTCGGTGGGTACGGGGTATGG TCCCCGGAGGAGGCGCCCAGTTGTAGAATGGCCTCGATGCAACGGTCGTC CAGGGAGGTCGGACCACTGCCTAACCCCACGGAGGCCCCCGAGCCTTCCC GCCCTCCCTCCAGCCCTCCTTCCCGCCCTCGCAGGCCCCGGAGCGAGGGT CCCGAGGACGACACGACCGAGGAGGTACTGTTGAAATGATCCATGTTGAT GAGCTCCTCCCCCGTGGCCGTGGTGGCCAGACTGGCCGGCCGCTCTTCCT CGCCTTCCCTCCCTCCCTCTCTCCCTCCCTCCTTGCCGTCGTCCCCCCCC ACCCGCTCCTGCTTCACCCGGTTCATCCCCTCGGCGTAAGTGCCTCCCAT CGCAGTCGGGGACCCCATGCGCCGGAGCTTGGTCGGCATGTACACGTTCA CGGAGGAATCGCTCTTGAACAAGGGAGGCAGCGGGGGGCAGGCCAAGCCG CCCTCCTCCTCCGTCCCGCCTTCCCCCCCACCCTCTGTTCCGCCCTCCGC CACGCCCTCCCCTACCAGGTCTGGACAGCGCTCCGCCCCTGCCATGAAGA CGGGGCCTGCCCCTCCCATCGGGAGCCGCCCCGGTCGACCACCGTCCACG GAGGAGGAAGAACCCCCGCCGCTTCCTATCATGCTCAAGCTTGCTTCGAA TTCCAGGCTCGAGATGCCTCGCAGCATGCTGTCGTCCCCTCCCTCCTCCT CGCGCCGGGGGGGGTCCACGGGCAGGCCCTCCCTTTCTTCCTCCACTTGG AGGTCGCTCATGGTCTGCTCCAGTTTCGTGATCTTTCCGGGCTCATCTTC GTCCAACTCCTTACCTTCGGCTTCGTCGTGCATCGCCGATGACTCCTCCA CTTCTGTTCCACCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCT CCTCCTCCTCCTCCTCCTTCGCCTGCAAACGGTACCTCTGGTGGTGACGG AACAGTGGCACCCGTTTCCGCCATCTCAAGCATACTGTCAACTTCCTCTA TGCCTAGAGATGTGATTTTTATGGTGTCTCCATCTACATTTTGCCGTTTG AATTAAAAGCAGGTAAACCGGATGTGTTGGGAGATATGAGAACGGAGGGC TCTACAAGAAGGGTCGAAAGGTAAGGCAGTCTAAGAAGAGGTGGCCAACC TAGAGCCTGTTACCCTACAAAATCTAACTTTGGTTACTTGACGGGTAATG TATAACCTGGAGTGTTATACCCTTCTATTTGACTAAGTCCTGCCATTAAA TAATTCCTCAGAGAAAAAAAGAAACCTCCCTGGCATGTCAGCCG back to topprotein sequence of rna5397 >rna5397-protein ID=rna5397-protein|Name=rna5397|organism=Nannochloropsis gaditana|type=polypeptide|length=550bp MAIKMFLINLPWRFLRAFSKGASLLRFLFRRLTSPAIRDAVHSSFDMMIS KQLIAAHLPLDQPWTLAAIGLSAAFLAFICVFFLLTPRSRKDTPPVIGNA WPLFGHFFLFLKSPINLIKSSYQTYGSVFTVNLFTQRMTFLIGPEAAAAF FKASDKELGQDEVYGFMKAVFGEGVVYDSDPKKRNLQMQRTANALKSGRL RTYVEKISEETEAFFKGWGEAGEVDICEALSDLIILTASRCLHGDDVRQE LFAEVSKLYNDLDQGITPVSVLFPNLPIPSHWKRDAARKEMVKLFSKVIQ RRRAAGAAEAEARTDILQVFMDIEYKDGSKITDDEVTGLLIALLFAGQHT SSITSSWTALYLAQNKGLQDRVYAEQVAIRGQDTGSEAALRALDFDAVGK MDMLFNCLREALRMHPPLIMLMRQCRQDLLVQSQEGKAFTVPKGSVVAVS PSVQQRLPSLFPAPDSFDPDRFAPPREEHKPLFAYVPFGGGLHACLGQQF AYVQLKTVLSLLFSKFELTLATPDGAVPPPNYHAMVVGPTAPCTVKYRRR back to topmRNA from alignment at CM002465.1:911010..913219- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5397 ID=rna5397|Name=rna5397|organism=Nannochloropsis gaditana|type=mRNA|length=2210bp|location=Sequence derived from alignment at CM002465.1:911010..913219- (Nannochloropsis gaditana) ATGGCGATCAAAATGTTTTTAATTAATTTGCCGTGGCGGTCAGTCACCTG
CAAGGGTGTCCAACCCATTTTTAACACTCGCCCTCTCCGTCTCTCTTTTC
CACATTTTCAGTTTTCTTCGTGCGTTTTCTAAAGGTGCTTCCTTGCTCCG
TTTCCTCTTCCGTCGGCTTACGTCTCCTGCTATACGCGACGCGGTGCACT
CTAGCTTTGACATGATGATCAGTAAGCAACTTATAGCCGCGCATCTTCCC
TTGGACCAGCCATGGACGCTTGCAGCGATAGGTAAGCTGAGAGTGAAGCC
TCGGGCACGTGGTGTTTTGATGAAGCGCATTCATTTTTCTGCTTAGGTAT
TATTCCCTGTGTTGTTCCTCGCTTTACCGGTGAAATCGGTCATGCGCGAG
AGCTTGCTATATATTCTTAGATACATGGACGACATAGTAGGGAAACGCTG
CCATTTCTTTCCCTGGAGTGCACGCGAAATAAAATCGTTCATCACGGGGA
TAGGCTTGGTTGTTGGCTGTCCTTGTCTCTTGCATCTTCTCCTTCCCTTT
CTGCGGCCCCCGTCTTTGCCGGCGCTGATCCGTTGTAGCTCGAAAGTCCT
TTCCCTTTCAGCCTTAGCGTCTGTTCTCTTTTTTCACTGGCATTTCTCCT
GGTTTTCGGTTTTGTTTTTCATCATTCCTCACAATCCAATCCACCCTTCC
CTGCCTCCCTTCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTATC
CCCTCCCCTCTTCAGGCCTCTCTGCCGCCTTCCTCGCCTTCATCTGCGTG
TTTTTCCTCCTCACGCCCAGGTCAAGAAAGGACACCCCCCCCGTCATCGG
CAATGCCTGGCCGCTTTTCGGGCATTTTTTCCTCTTCTTGAAGTCTCCCA
TCAACCTGATCAAATCCTCCTACCAGACGTACGGGAGCGTCTTCACCGTG
AACCTCTTCACCCAACGCATGACCTTTTTGATCGGCCCGGAGGCGGCCGC
GGCATTTTTCAAGGCGAGCGACAAGGAGCTGGGGCAGGACGAGGTGTACG
GGTTCATGAAAGCCGTCTTTGGGGAGGGCGTGGTGTACGACTCGGACCCC
AAGAAACGGAATTTGCAAATGCAACGGACGGCGAACGCCTTGAAATCGGG
CCGGCTTCGGACGTACGTGGAAAAAATTTCGGAGGAAACGGAGGCGTTCT
TTAAGGGGTGGGGGGAGGCGGGGGAGGTGGATATCTGTGAGGCGCTCAGC
GATTTGATCATTTTGACCGCTTCCCGGTGTTTGCACGGGGACGACGTCCG
CCAGGAGCTCTTCGCGGAGGTCTCCAAGCTTTACAATGACCTGGACCAGG
GGATCACGCCCGTCTCGGTGTTGTTCCCGAACTTGCCGATCCCGTCGCAT
TGGAAACGGGACGCGGCTCGGAAAGAGATGGTCAAGCTCTTCTCCAAGGT
GATCCAACGCCGGCGGGCGGCAGGGGCGGCGGAGGCAGAGGCCCGCACGG
ACATCCTCCAGGTGTTTATGGACATCGAATACAAGGACGGGAGCAAGATC
ACCGACGACGAGGTGACGGGCTTGCTGATCGCCTTACTCTTTGCCGGGCA
GCACACCTCCTCCATCACGTCTTCCTGGACGGCCTTGTACCTGGCGCAAA
ACAAAGGCTTGCAAGACCGAGTCTATGCGGAGCAAGTCGCCATCCGGGGG
CAGGACACGGGGTCCGAGGCAGCGCTGAGGGCCTTGGATTTCGACGCGGT
GGGGAAAATGGATATGTTGTTCAATTGCCTTCGAGAAGCTTTGCGGATGC
ACCCGCCCTTGATCATGCTGATGCGGCAATGCCGGCAGGACCTGCTCGTC
CAGTCCCAGGAAGGAAAAGCCTTTACCGTCCCCAAAGGGAGCGTGGTGGC
TGTCTCCCCCTCCGTGCAGCAACGCCTCCCGTCTTTGTTCCCGGCGCCCG
ACAGCTTCGACCCGGACCGGTTTGCGCCCCCTCGGGAAGAACACAAACCT
CTCTTTGCCTACGTTCCCTTTGGCGGGGGGTTGCACGCCTGCCTGGGCCA
ACAATTCGCCTATGTGCAGCTGAAAACCGTCCTCTCCTTGCTCTTCTCGA
AATTTGAACTGACTTTGGCTACCCCCGATGGTGCCGTTCCTCCCCCGAAC
TACCACGCGATGGTGGTAGGGCCCACAGCGCCCTGCACTGTAAAGTACCG
ACGGCGGTAA back to topCoding sequence (CDS) from alignment at CM002465.1:911010..913219- >rna5397 ID=rna5397|Name=rna5397|organism=Nannochloropsis gaditana|type=CDS|length=4959bp|location=Sequence derived from alignment at CM002465.1:911010..913219- (Nannochloropsis gaditana) GCCTCTCTGCCGCCTTCCTCGCCTTCATCTGCGTGTTTTTCCTCCTCACG CCCAGGTCAAGAAAGGACACCCCCCCCGTCATCGGCAATGCCTGGCCGCT TTTCGGGCATTTTTTCCTCTTCTTGAAGTCTCCCATCAACCTGATCAAAT CCTCCTACCAGACGTACGGGAGCGTCTTCACCGTGAACCTCTTCACCCAA CGCATGACCTTTTTGATCGGCCCGGAGGCGGCCGCGGCATTTTTCAAGGC GAGCGACAAGGAGCTGGGGCAGGACGAGGTGTACGGGTTCATGAAAGCCG TCTTTGGGGAGGGCGTGGTGTACGACTCGGACCCCAAGAAACGGAATTTG CAAATGCAACGGACGGCGAACGCCTTGAAATCGGGCCGGCTTCGGACGTA CGTGGAAAAAATTTCGGAGGAAACGGAGGCGTTCTTTAAGGGGTGGGGGG AGGCGGGGGAGGTGGATATCTGTGAGGCGCTCAGCGATTTGATCATTTTG ACCGCTTCCCGGTGTTTGCACGGGGACGACGTCCGCCAGGAGCTCTTCGC GGAGGTCTCCAAGCTTTACAATGACCTGGACCAGGGGATCACGCCCGTCT CGGTGTTGTTCCCGAACTTGCCGATCCCGTCGCATTGGAAACGGGACGCG GCTCGGAAAGAGATGGTCAAGCTCTTCTCCAAGGTGATCCAACGCCGGCG GGCGGCAGGGGCGGCGGAGGCAGAGGCCCGCACGGACATCCTCCAGGTGT TTATGGACATCGAATACAAGGACGGGAGCAAGATCACCGACGACGAGGTG ACGGGCTTGCTGATCGCCTTACTCTTTGCCGGGCAGCACACCTCCTCCAT CACGTCTTCCTGGACGGCCTTGTACCTGGCGCAAAACAAAGGCTTGCAAG ACCGAGTCTATGCGGAGCAAGTCGCCATCCGGGGGCAGGACACGGGGTCC GAGGCAGCGCTGAGGGCCTTGGATTTCGACGCGGTGGGGAAAATGGATAT GTTGTTCAATTGCCTTCGAGAAGCTTTGCGGATGCACCCGCCCTTGATCA TGCTGATGCGGCAATGCCGGCAGGACCTGCTCGTCCAGTCCCAGGAAGGA AAAGCCTTTACCGTCCCCAAAGGGAGCGTGGTGGCTGTCTCCCCCTCCGT GCAGCAACGCCTCCCGTCTTTGTTCCCGGCGCCCGACAGCTTCGACCCGG ACCGGTTTGCGCCCCCTCGGGAAGAACACAAACCTCTCTTTGCCTACGTT CCCTTTGGCGGGGGGTTGCACGCCTGCCTGGGCCAACAATTCGCCTATGT GCAGCTGAAAACCGTCCTCTCCTTGCTCTTCTCGAAATTTGAACTGACTT TGGCTACCCCCGATGGTGCCGTTCCTCCCCCGAACTACCACGCGATGGTG GTAGGGCCCACAGCGCCCTGCACTGTAAAGTACCGACGGCGGTAATTTTC TTCGTGCGTTTTCTAAAGGTGCTTCCTTGCTCCGTTTCCTCTTCCGTCGG CTTACGTCTCCTGCTATACGCGACGCGGTGCACTCTAGCTTTGACATGAT GATCAGTAAGCAACTTATAGCCGCGCATCTTCCCTTGGACCAGCCATGGA CGCTTGCAGCGATAGATGGCGATCAAAATGTTTTTAATTAATTTGCCGTG GCGGCCTCTCTGCCGCCTTCCTCGCCTTCATCTGCGTGTTTTTCCTCCTC ACGCCCAGGTCAAGAAAGGACACCCCCCCCGTCATCGGCAATGCCTGGCC GCTTTTCGGGCATTTTTTCCTCTTCTTGAAGTCTCCCATCAACCTGATCA AATCCTCCTACCAGACGTACGGGAGCGTCTTCACCGTGAACCTCTTCACC CAACGCATGACCTTTTTGATCGGCCCGGAGGCGGCCGCGGCATTTTTCAA GGCGAGCGACAAGGAGCTGGGGCAGGACGAGGTGTACGGGTTCATGAAAG CCGTCTTTGGGGAGGGCGTGGTGTACGACTCGGACCCCAAGAAACGGAAT TTGCAAATGCAACGGACGGCGAACGCCTTGAAATCGGGCCGGCTTCGGAC GTACGTGGAAAAAATTTCGGAGGAAACGGAGGCGTTCTTTAAGGGGTGGG GGGAGGCGGGGGAGGTGGATATCTGTGAGGCGCTCAGCGATTTGATCATT TTGACCGCTTCCCGGTGTTTGCACGGGGACGACGTCCGCCAGGAGCTCTT CGCGGAGGTCTCCAAGCTTTACAATGACCTGGACCAGGGGATCACGCCCG TCTCGGTGTTGTTCCCGAACTTGCCGATCCCGTCGCATTGGAAACGGGAC GCGGCTCGGAAAGAGATGGTCAAGCTCTTCTCCAAGGTGATCCAACGCCG GCGGGCGGCAGGGGCGGCGGAGGCAGAGGCCCGCACGGACATCCTCCAGG TGTTTATGGACATCGAATACAAGGACGGGAGCAAGATCACCGACGACGAG GTGACGGGCTTGCTGATCGCCTTACTCTTTGCCGGGCAGCACACCTCCTC CATCACGTCTTCCTGGACGGCCTTGTACCTGGCGCAAAACAAAGGCTTGC AAGACCGAGTCTATGCGGAGCAAGTCGCCATCCGGGGGCAGGACACGGGG TCCGAGGCAGCGCTGAGGGCCTTGGATTTCGACGCGGTGGGGAAAATGGA TATGTTGTTCAATTGCCTTCGAGAAGCTTTGCGGATGCACCCGCCCTTGA TCATGCTGATGCGGCAATGCCGGCAGGACCTGCTCGTCCAGTCCCAGGAA GGAAAAGCCTTTACCGTCCCCAAAGGGAGCGTGGTGGCTGTCTCCCCCTC CGTGCAGCAACGCCTCCCGTCTTTGTTCCCGGCGCCCGACAGCTTCGACC CGGACCGGTTTGCGCCCCCTCGGGAAGAACACAAACCTCTCTTTGCCTAC GTTCCCTTTGGCGGGGGGTTGCACGCCTGCCTGGGCCAACAATTCGCCTA TGTGCAGCTGAAAACCGTCCTCTCCTTGCTCTTCTCGAAATTTGAACTGA CTTTGGCTACCCCCGATGGTGCCGTTCCTCCCCCGAACTACCACGCGATG GTGGTAGGGCCCACAGCGCCCTGCACTGTAAAGTACCGACGGCGGTAATT TTCTTCGTGCGTTTTCTAAAGGTGCTTCCTTGCTCCGTTTCCTCTTCCGT CGGCTTACGTCTCCTGCTATACGCGACGCGGTGCACTCTAGCTTTGACAT GATGATCAGTAAGCAACTTATAGCCGCGCATCTTCCCTTGGACCAGCCAT GGACGCTTGCAGCGATAGATGGCGATCAAAATGTTTTTAATTAATTTGCC GTGGCGGCCTCTCTGCCGCCTTCCTCGCCTTCATCTGCGTGTTTTTCCTC CTCACGCCCAGGTCAAGAAAGGACACCCCCCCCGTCATCGGCAATGCCTG GCCGCTTTTCGGGCATTTTTTCCTCTTCTTGAAGTCTCCCATCAACCTGA TCAAATCCTCCTACCAGACGTACGGGAGCGTCTTCACCGTGAACCTCTTC ACCCAACGCATGACCTTTTTGATCGGCCCGGAGGCGGCCGCGGCATTTTT CAAGGCGAGCGACAAGGAGCTGGGGCAGGACGAGGTGTACGGGTTCATGA AAGCCGTCTTTGGGGAGGGCGTGGTGTACGACTCGGACCCCAAGAAACGG AATTTGCAAATGCAACGGACGGCGAACGCCTTGAAATCGGGCCGGCTTCG GACGTACGTGGAAAAAATTTCGGAGGAAACGGAGGCGTTCTTTAAGGGGT GGGGGGAGGCGGGGGAGGTGGATATCTGTGAGGCGCTCAGCGATTTGATC ATTTTGACCGCTTCCCGGTGTTTGCACGGGGACGACGTCCGCCAGGAGCT CTTCGCGGAGGTCTCCAAGCTTTACAATGACCTGGACCAGGGGATCACGC CCGTCTCGGTGTTGTTCCCGAACTTGCCGATCCCGTCGCATTGGAAACGG GACGCGGCTCGGAAAGAGATGGTCAAGCTCTTCTCCAAGGTGATCCAACG CCGGCGGGCGGCAGGGGCGGCGGAGGCAGAGGCCCGCACGGACATCCTCC AGGTGTTTATGGACATCGAATACAAGGACGGGAGCAAGATCACCGACGAC GAGGTGACGGGCTTGCTGATCGCCTTACTCTTTGCCGGGCAGCACACCTC CTCCATCACGTCTTCCTGGACGGCCTTGTACCTGGCGCAAAACAAAGGCT TGCAAGACCGAGTCTATGCGGAGCAAGTCGCCATCCGGGGGCAGGACACG GGGTCCGAGGCAGCGCTGAGGGCCTTGGATTTCGACGCGGTGGGGAAAAT GGATATGTTGTTCAATTGCCTTCGAGAAGCTTTGCGGATGCACCCGCCCT TGATCATGCTGATGCGGCAATGCCGGCAGGACCTGCTCGTCCAGTCCCAG GAAGGAAAAGCCTTTACCGTCCCCAAAGGGAGCGTGGTGGCTGTCTCCCC CTCCGTGCAGCAACGCCTCCCGTCTTTGTTCCCGGCGCCCGACAGCTTCG ACCCGGACCGGTTTGCGCCCCCTCGGGAAGAACACAAACCTCTCTTTGCC TACGTTCCCTTTGGCGGGGGGTTGCACGCCTGCCTGGGCCAACAATTCGC CTATGTGCAGCTGAAAACCGTCCTCTCCTTGCTCTTCTCGAAATTTGAAC TGACTTTGGCTACCCCCGATGGTGCCGTTCCTCCCCCGAACTACCACGCG ATGGTGGTAGGGCCCACAGCGCCCTGCACTGTAAAGTACCGACGGCGGTA ATTTTCTTCGTGCGTTTTCTAAAGGTGCTTCCTTGCTCCGTTTCCTCTTC CGTCGGCTTACGTCTCCTGCTATACGCGACGCGGTGCACTCTAGCTTTGA CATGATGATCAGTAAGCAACTTATAGCCGCGCATCTTCCCTTGGACCAGC CATGGACGCTTGCAGCGATAGATGGCGATCAAAATGTTTTTAATTAATTT GCCGTGGCG back to top
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