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Properties
| Property Name | Value |
|---|
| Product | obtusifoliol 14-alpha demethylase |
| Orig transcript id | gnl|cribi|Naga_100403g3.9949.mrna |
| Orig protein id | gnl|cribi|Naga_100403g3.9949 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:911010..913219 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5397 ID=rna5397|Name=rna5397|organism=Nannochloropsis gaditana|type=mRNA|length=1394bp
GCCACGGACAGAAGCCTGCAACAAGGTGCCCTCCCCGCCCAATGGCACGC
TTTCCCCCTGCGCGAGGGCGGGGGCTGTCGTCGGTGGGTACGGGGTATGG
TCCCCGGAGGAGGCGCCCAGTTGTAGAATGGCCTCGATGCAACGGTCGTC
CAGGGAGGTCGGACCACTGCCTAACCCCACGGAGGCCCCCGAGCCTTCCC
GCCCTCCCTCCAGCCCTCCTTCCCGCCCTCGCAGGCCCCGGAGCGAGGGT
CCCGAGGACGACACGACCGAGGAGGTACTGTTGAAATGATCCATGTTGAT
GAGCTCCTCCCCCGTGGCCGTGGTGGCCAGACTGGCCGGCCGCTCTTCCT
CGCCTTCCCTCCCTCCCTCTCTCCCTCCCTCCTTGCCGTCGTCCCCCCCC
ACCCGCTCCTGCTTCACCCGGTTCATCCCCTCGGCGTAAGTGCCTCCCAT
CGCAGTCGGGGACCCCATGCGCCGGAGCTTGGTCGGCATGTACACGTTCA
CGGAGGAATCGCTCTTGAACAAGGGAGGCAGCGGGGGGCAGGCCAAGCCG
CCCTCCTCCTCCGTCCCGCCTTCCCCCCCACCCTCTGTTCCGCCCTCCGC
CACGCCCTCCCCTACCAGGTCTGGACAGCGCTCCGCCCCTGCCATGAAGA
CGGGGCCTGCCCCTCCCATCGGGAGCCGCCCCGGTCGACCACCGTCCACG
GAGGAGGAAGAACCCCCGCCGCTTCCTATCATGCTCAAGCTTGCTTCGAA
TTCCAGGCTCGAGATGCCTCGCAGCATGCTGTCGTCCCCTCCCTCCTCCT
CGCGCCGGGGGGGGTCCACGGGCAGGCCCTCCCTTTCTTCCTCCACTTGG
AGGTCGCTCATGGTCTGCTCCAGTTTCGTGATCTTTCCGGGCTCATCTTC
GTCCAACTCCTTACCTTCGGCTTCGTCGTGCATCGCCGATGACTCCTCCA
CTTCTGTTCCACCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTTCGCCTGCAAACGGTACCTCTGGTGGTGACGG
AACAGTGGCACCCGTTTCCGCCATCTCAAGCATACTGTCAACTTCCTCTA
TGCCTAGAGATGTGATTTTTATGGTGTCTCCATCTACATTTTGCCGTTTG
AATTAAAAGCAGGTAAACCGGATGTGTTGGGAGATATGAGAACGGAGGGC
TCTACAAGAAGGGTCGAAAGGTAAGGCAGTCTAAGAAGAGGTGGCCAACC
TAGAGCCTGTTACCCTACAAAATCTAACTTTGGTTACTTGACGGGTAATG
TATAACCTGGAGTGTTATACCCTTCTATTTGACTAAGTCCTGCCATTAAA
TAATTCCTCAGAGAAAAAAAGAAACCTCCCTGGCATGTCAGCCG back to topprotein sequence of rna5397 >rna5397-protein ID=rna5397-protein|Name=rna5397|organism=Nannochloropsis gaditana|type=polypeptide|length=550bp
MAIKMFLINLPWRFLRAFSKGASLLRFLFRRLTSPAIRDAVHSSFDMMIS
KQLIAAHLPLDQPWTLAAIGLSAAFLAFICVFFLLTPRSRKDTPPVIGNA
WPLFGHFFLFLKSPINLIKSSYQTYGSVFTVNLFTQRMTFLIGPEAAAAF
FKASDKELGQDEVYGFMKAVFGEGVVYDSDPKKRNLQMQRTANALKSGRL
RTYVEKISEETEAFFKGWGEAGEVDICEALSDLIILTASRCLHGDDVRQE
LFAEVSKLYNDLDQGITPVSVLFPNLPIPSHWKRDAARKEMVKLFSKVIQ
RRRAAGAAEAEARTDILQVFMDIEYKDGSKITDDEVTGLLIALLFAGQHT
SSITSSWTALYLAQNKGLQDRVYAEQVAIRGQDTGSEAALRALDFDAVGK
MDMLFNCLREALRMHPPLIMLMRQCRQDLLVQSQEGKAFTVPKGSVVAVS
PSVQQRLPSLFPAPDSFDPDRFAPPREEHKPLFAYVPFGGGLHACLGQQF
AYVQLKTVLSLLFSKFELTLATPDGAVPPPNYHAMVVGPTAPCTVKYRRR back to topmRNA from alignment at CM002465.1:911010..913219- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5397 ID=rna5397|Name=rna5397|organism=Nannochloropsis gaditana|type=mRNA|length=2210bp|location=Sequence derived from alignment at CM002465.1:911010..913219- (Nannochloropsis gaditana)
ATGGCGATCAAAATGTTTTTAATTAATTTGCCGTGGCGGTCAGTCACCTG
CAAGGGTGTCCAACCCATTTTTAACACTCGCCCTCTCCGTCTCTCTTTTC
CACATTTTCAGTTTTCTTCGTGCGTTTTCTAAAGGTGCTTCCTTGCTCCG
TTTCCTCTTCCGTCGGCTTACGTCTCCTGCTATACGCGACGCGGTGCACT
CTAGCTTTGACATGATGATCAGTAAGCAACTTATAGCCGCGCATCTTCCC
TTGGACCAGCCATGGACGCTTGCAGCGATAGGTAAGCTGAGAGTGAAGCC
TCGGGCACGTGGTGTTTTGATGAAGCGCATTCATTTTTCTGCTTAGGTAT
TATTCCCTGTGTTGTTCCTCGCTTTACCGGTGAAATCGGTCATGCGCGAG
AGCTTGCTATATATTCTTAGATACATGGACGACATAGTAGGGAAACGCTG
CCATTTCTTTCCCTGGAGTGCACGCGAAATAAAATCGTTCATCACGGGGA
TAGGCTTGGTTGTTGGCTGTCCTTGTCTCTTGCATCTTCTCCTTCCCTTT
CTGCGGCCCCCGTCTTTGCCGGCGCTGATCCGTTGTAGCTCGAAAGTCCT
TTCCCTTTCAGCCTTAGCGTCTGTTCTCTTTTTTCACTGGCATTTCTCCT
GGTTTTCGGTTTTGTTTTTCATCATTCCTCACAATCCAATCCACCCTTCC
CTGCCTCCCTTCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTATC
CCCTCCCCTCTTCAGGCCTCTCTGCCGCCTTCCTCGCCTTCATCTGCGTG
TTTTTCCTCCTCACGCCCAGGTCAAGAAAGGACACCCCCCCCGTCATCGG
CAATGCCTGGCCGCTTTTCGGGCATTTTTTCCTCTTCTTGAAGTCTCCCA
TCAACCTGATCAAATCCTCCTACCAGACGTACGGGAGCGTCTTCACCGTG
AACCTCTTCACCCAACGCATGACCTTTTTGATCGGCCCGGAGGCGGCCGC
GGCATTTTTCAAGGCGAGCGACAAGGAGCTGGGGCAGGACGAGGTGTACG
GGTTCATGAAAGCCGTCTTTGGGGAGGGCGTGGTGTACGACTCGGACCCC
AAGAAACGGAATTTGCAAATGCAACGGACGGCGAACGCCTTGAAATCGGG
CCGGCTTCGGACGTACGTGGAAAAAATTTCGGAGGAAACGGAGGCGTTCT
TTAAGGGGTGGGGGGAGGCGGGGGAGGTGGATATCTGTGAGGCGCTCAGC
GATTTGATCATTTTGACCGCTTCCCGGTGTTTGCACGGGGACGACGTCCG
CCAGGAGCTCTTCGCGGAGGTCTCCAAGCTTTACAATGACCTGGACCAGG
GGATCACGCCCGTCTCGGTGTTGTTCCCGAACTTGCCGATCCCGTCGCAT
TGGAAACGGGACGCGGCTCGGAAAGAGATGGTCAAGCTCTTCTCCAAGGT
GATCCAACGCCGGCGGGCGGCAGGGGCGGCGGAGGCAGAGGCCCGCACGG
ACATCCTCCAGGTGTTTATGGACATCGAATACAAGGACGGGAGCAAGATC
ACCGACGACGAGGTGACGGGCTTGCTGATCGCCTTACTCTTTGCCGGGCA
GCACACCTCCTCCATCACGTCTTCCTGGACGGCCTTGTACCTGGCGCAAA
ACAAAGGCTTGCAAGACCGAGTCTATGCGGAGCAAGTCGCCATCCGGGGG
CAGGACACGGGGTCCGAGGCAGCGCTGAGGGCCTTGGATTTCGACGCGGT
GGGGAAAATGGATATGTTGTTCAATTGCCTTCGAGAAGCTTTGCGGATGC
ACCCGCCCTTGATCATGCTGATGCGGCAATGCCGGCAGGACCTGCTCGTC
CAGTCCCAGGAAGGAAAAGCCTTTACCGTCCCCAAAGGGAGCGTGGTGGC
TGTCTCCCCCTCCGTGCAGCAACGCCTCCCGTCTTTGTTCCCGGCGCCCG
ACAGCTTCGACCCGGACCGGTTTGCGCCCCCTCGGGAAGAACACAAACCT
CTCTTTGCCTACGTTCCCTTTGGCGGGGGGTTGCACGCCTGCCTGGGCCA
ACAATTCGCCTATGTGCAGCTGAAAACCGTCCTCTCCTTGCTCTTCTCGA
AATTTGAACTGACTTTGGCTACCCCCGATGGTGCCGTTCCTCCCCCGAAC
TACCACGCGATGGTGGTAGGGCCCACAGCGCCCTGCACTGTAAAGTACCG
ACGGCGGTAA back to topCoding sequence (CDS) from alignment at CM002465.1:911010..913219- >rna5397 ID=rna5397|Name=rna5397|organism=Nannochloropsis gaditana|type=CDS|length=4959bp|location=Sequence derived from alignment at CM002465.1:911010..913219- (Nannochloropsis gaditana)
GCCTCTCTGCCGCCTTCCTCGCCTTCATCTGCGTGTTTTTCCTCCTCACG
CCCAGGTCAAGAAAGGACACCCCCCCCGTCATCGGCAATGCCTGGCCGCT
TTTCGGGCATTTTTTCCTCTTCTTGAAGTCTCCCATCAACCTGATCAAAT
CCTCCTACCAGACGTACGGGAGCGTCTTCACCGTGAACCTCTTCACCCAA
CGCATGACCTTTTTGATCGGCCCGGAGGCGGCCGCGGCATTTTTCAAGGC
GAGCGACAAGGAGCTGGGGCAGGACGAGGTGTACGGGTTCATGAAAGCCG
TCTTTGGGGAGGGCGTGGTGTACGACTCGGACCCCAAGAAACGGAATTTG
CAAATGCAACGGACGGCGAACGCCTTGAAATCGGGCCGGCTTCGGACGTA
CGTGGAAAAAATTTCGGAGGAAACGGAGGCGTTCTTTAAGGGGTGGGGGG
AGGCGGGGGAGGTGGATATCTGTGAGGCGCTCAGCGATTTGATCATTTTG
ACCGCTTCCCGGTGTTTGCACGGGGACGACGTCCGCCAGGAGCTCTTCGC
GGAGGTCTCCAAGCTTTACAATGACCTGGACCAGGGGATCACGCCCGTCT
CGGTGTTGTTCCCGAACTTGCCGATCCCGTCGCATTGGAAACGGGACGCG
GCTCGGAAAGAGATGGTCAAGCTCTTCTCCAAGGTGATCCAACGCCGGCG
GGCGGCAGGGGCGGCGGAGGCAGAGGCCCGCACGGACATCCTCCAGGTGT
TTATGGACATCGAATACAAGGACGGGAGCAAGATCACCGACGACGAGGTG
ACGGGCTTGCTGATCGCCTTACTCTTTGCCGGGCAGCACACCTCCTCCAT
CACGTCTTCCTGGACGGCCTTGTACCTGGCGCAAAACAAAGGCTTGCAAG
ACCGAGTCTATGCGGAGCAAGTCGCCATCCGGGGGCAGGACACGGGGTCC
GAGGCAGCGCTGAGGGCCTTGGATTTCGACGCGGTGGGGAAAATGGATAT
GTTGTTCAATTGCCTTCGAGAAGCTTTGCGGATGCACCCGCCCTTGATCA
TGCTGATGCGGCAATGCCGGCAGGACCTGCTCGTCCAGTCCCAGGAAGGA
AAAGCCTTTACCGTCCCCAAAGGGAGCGTGGTGGCTGTCTCCCCCTCCGT
GCAGCAACGCCTCCCGTCTTTGTTCCCGGCGCCCGACAGCTTCGACCCGG
ACCGGTTTGCGCCCCCTCGGGAAGAACACAAACCTCTCTTTGCCTACGTT
CCCTTTGGCGGGGGGTTGCACGCCTGCCTGGGCCAACAATTCGCCTATGT
GCAGCTGAAAACCGTCCTCTCCTTGCTCTTCTCGAAATTTGAACTGACTT
TGGCTACCCCCGATGGTGCCGTTCCTCCCCCGAACTACCACGCGATGGTG
GTAGGGCCCACAGCGCCCTGCACTGTAAAGTACCGACGGCGGTAATTTTC
TTCGTGCGTTTTCTAAAGGTGCTTCCTTGCTCCGTTTCCTCTTCCGTCGG
CTTACGTCTCCTGCTATACGCGACGCGGTGCACTCTAGCTTTGACATGAT
GATCAGTAAGCAACTTATAGCCGCGCATCTTCCCTTGGACCAGCCATGGA
CGCTTGCAGCGATAGATGGCGATCAAAATGTTTTTAATTAATTTGCCGTG
GCGGCCTCTCTGCCGCCTTCCTCGCCTTCATCTGCGTGTTTTTCCTCCTC
ACGCCCAGGTCAAGAAAGGACACCCCCCCCGTCATCGGCAATGCCTGGCC
GCTTTTCGGGCATTTTTTCCTCTTCTTGAAGTCTCCCATCAACCTGATCA
AATCCTCCTACCAGACGTACGGGAGCGTCTTCACCGTGAACCTCTTCACC
CAACGCATGACCTTTTTGATCGGCCCGGAGGCGGCCGCGGCATTTTTCAA
GGCGAGCGACAAGGAGCTGGGGCAGGACGAGGTGTACGGGTTCATGAAAG
CCGTCTTTGGGGAGGGCGTGGTGTACGACTCGGACCCCAAGAAACGGAAT
TTGCAAATGCAACGGACGGCGAACGCCTTGAAATCGGGCCGGCTTCGGAC
GTACGTGGAAAAAATTTCGGAGGAAACGGAGGCGTTCTTTAAGGGGTGGG
GGGAGGCGGGGGAGGTGGATATCTGTGAGGCGCTCAGCGATTTGATCATT
TTGACCGCTTCCCGGTGTTTGCACGGGGACGACGTCCGCCAGGAGCTCTT
CGCGGAGGTCTCCAAGCTTTACAATGACCTGGACCAGGGGATCACGCCCG
TCTCGGTGTTGTTCCCGAACTTGCCGATCCCGTCGCATTGGAAACGGGAC
GCGGCTCGGAAAGAGATGGTCAAGCTCTTCTCCAAGGTGATCCAACGCCG
GCGGGCGGCAGGGGCGGCGGAGGCAGAGGCCCGCACGGACATCCTCCAGG
TGTTTATGGACATCGAATACAAGGACGGGAGCAAGATCACCGACGACGAG
GTGACGGGCTTGCTGATCGCCTTACTCTTTGCCGGGCAGCACACCTCCTC
CATCACGTCTTCCTGGACGGCCTTGTACCTGGCGCAAAACAAAGGCTTGC
AAGACCGAGTCTATGCGGAGCAAGTCGCCATCCGGGGGCAGGACACGGGG
TCCGAGGCAGCGCTGAGGGCCTTGGATTTCGACGCGGTGGGGAAAATGGA
TATGTTGTTCAATTGCCTTCGAGAAGCTTTGCGGATGCACCCGCCCTTGA
TCATGCTGATGCGGCAATGCCGGCAGGACCTGCTCGTCCAGTCCCAGGAA
GGAAAAGCCTTTACCGTCCCCAAAGGGAGCGTGGTGGCTGTCTCCCCCTC
CGTGCAGCAACGCCTCCCGTCTTTGTTCCCGGCGCCCGACAGCTTCGACC
CGGACCGGTTTGCGCCCCCTCGGGAAGAACACAAACCTCTCTTTGCCTAC
GTTCCCTTTGGCGGGGGGTTGCACGCCTGCCTGGGCCAACAATTCGCCTA
TGTGCAGCTGAAAACCGTCCTCTCCTTGCTCTTCTCGAAATTTGAACTGA
CTTTGGCTACCCCCGATGGTGCCGTTCCTCCCCCGAACTACCACGCGATG
GTGGTAGGGCCCACAGCGCCCTGCACTGTAAAGTACCGACGGCGGTAATT
TTCTTCGTGCGTTTTCTAAAGGTGCTTCCTTGCTCCGTTTCCTCTTCCGT
CGGCTTACGTCTCCTGCTATACGCGACGCGGTGCACTCTAGCTTTGACAT
GATGATCAGTAAGCAACTTATAGCCGCGCATCTTCCCTTGGACCAGCCAT
GGACGCTTGCAGCGATAGATGGCGATCAAAATGTTTTTAATTAATTTGCC
GTGGCGGCCTCTCTGCCGCCTTCCTCGCCTTCATCTGCGTGTTTTTCCTC
CTCACGCCCAGGTCAAGAAAGGACACCCCCCCCGTCATCGGCAATGCCTG
GCCGCTTTTCGGGCATTTTTTCCTCTTCTTGAAGTCTCCCATCAACCTGA
TCAAATCCTCCTACCAGACGTACGGGAGCGTCTTCACCGTGAACCTCTTC
ACCCAACGCATGACCTTTTTGATCGGCCCGGAGGCGGCCGCGGCATTTTT
CAAGGCGAGCGACAAGGAGCTGGGGCAGGACGAGGTGTACGGGTTCATGA
AAGCCGTCTTTGGGGAGGGCGTGGTGTACGACTCGGACCCCAAGAAACGG
AATTTGCAAATGCAACGGACGGCGAACGCCTTGAAATCGGGCCGGCTTCG
GACGTACGTGGAAAAAATTTCGGAGGAAACGGAGGCGTTCTTTAAGGGGT
GGGGGGAGGCGGGGGAGGTGGATATCTGTGAGGCGCTCAGCGATTTGATC
ATTTTGACCGCTTCCCGGTGTTTGCACGGGGACGACGTCCGCCAGGAGCT
CTTCGCGGAGGTCTCCAAGCTTTACAATGACCTGGACCAGGGGATCACGC
CCGTCTCGGTGTTGTTCCCGAACTTGCCGATCCCGTCGCATTGGAAACGG
GACGCGGCTCGGAAAGAGATGGTCAAGCTCTTCTCCAAGGTGATCCAACG
CCGGCGGGCGGCAGGGGCGGCGGAGGCAGAGGCCCGCACGGACATCCTCC
AGGTGTTTATGGACATCGAATACAAGGACGGGAGCAAGATCACCGACGAC
GAGGTGACGGGCTTGCTGATCGCCTTACTCTTTGCCGGGCAGCACACCTC
CTCCATCACGTCTTCCTGGACGGCCTTGTACCTGGCGCAAAACAAAGGCT
TGCAAGACCGAGTCTATGCGGAGCAAGTCGCCATCCGGGGGCAGGACACG
GGGTCCGAGGCAGCGCTGAGGGCCTTGGATTTCGACGCGGTGGGGAAAAT
GGATATGTTGTTCAATTGCCTTCGAGAAGCTTTGCGGATGCACCCGCCCT
TGATCATGCTGATGCGGCAATGCCGGCAGGACCTGCTCGTCCAGTCCCAG
GAAGGAAAAGCCTTTACCGTCCCCAAAGGGAGCGTGGTGGCTGTCTCCCC
CTCCGTGCAGCAACGCCTCCCGTCTTTGTTCCCGGCGCCCGACAGCTTCG
ACCCGGACCGGTTTGCGCCCCCTCGGGAAGAACACAAACCTCTCTTTGCC
TACGTTCCCTTTGGCGGGGGGTTGCACGCCTGCCTGGGCCAACAATTCGC
CTATGTGCAGCTGAAAACCGTCCTCTCCTTGCTCTTCTCGAAATTTGAAC
TGACTTTGGCTACCCCCGATGGTGCCGTTCCTCCCCCGAACTACCACGCG
ATGGTGGTAGGGCCCACAGCGCCCTGCACTGTAAAGTACCGACGGCGGTA
ATTTTCTTCGTGCGTTTTCTAAAGGTGCTTCCTTGCTCCGTTTCCTCTTC
CGTCGGCTTACGTCTCCTGCTATACGCGACGCGGTGCACTCTAGCTTTGA
CATGATGATCAGTAAGCAACTTATAGCCGCGCATCTTCCCTTGGACCAGC
CATGGACGCTTGCAGCGATAGATGGCGATCAAAATGTTTTTAATTAATTT
GCCGTGGCG back to top
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