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Properties
| Property Name | Value |
|---|
| Product | gdp-fucose transporter 1 |
| Orig transcript id | gnl|cribi|Naga_100240g1.2373.mrna |
| Orig protein id | gnl|cribi|Naga_100240g1.2373 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:879042..881111 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5388 ID=rna5388|Name=rna5388|organism=Nannochloropsis gaditana|type=mRNA|length=666bp
TTTCCCACCCATGGTTGATCCCGGATCACAAGATGGGTGGGAACATTCTC
GGATATCGCCATTGACGTGTCCTTCAGTTTGCTTTGGGTTTTGAGGTGTG
TCCCTTGCTCTACATGACAAATTGAAAACTTCCGAACAAAAACTAGTATG
CTGCTTTGGAAGAAAGGAAAGTTGAGATTGGCGGCCTTCTCGTTTTCTAA
TGGCATTTTACCGATGAAAGTCCAATACTAAGCACAGTCTAAAGACTTTA
TGTCTCAAGGGGGGCGTTCCATGCCGTATTCCGGCCACGCTAGCCTGAAT
AATGCGGCCTCTCAAAAATTCCCTTTAAGTGAGAGTCATCAAGAGGAACA
GGAACGGGACGCAGCCACACGTCCTACGGAACTGACGCGGATGCAAACGG
CAGCCAGAGAAGCTGAAGAGGAAGAATTGAGAAAAACAGGTAGAAATGAA
GTACAGCAAGGAGGCACGGCATCACAAGTCAAAGCAGGGGCTGAGTACCT
TGAAAAAGAGCTCCACGATATAGAGCAATCAAAAGCGAAAGAGGTAACTG
AAGGAGATGACTGAGAAAGAGGGATGTTTATGAAGGCAGCAAAGGTCCAG
AAAGAAAGACTAGTTAAAATCCCTGAAATGAATGCGACATTTTGCGAAGA
AGCATTGCTATTACGA back to topprotein sequence of rna5388 >rna5388-protein ID=rna5388-protein|Name=rna5388|organism=Nannochloropsis gaditana|type=polypeptide|length=373bp
MSVGHSKSAAHAANMKHIASVVAAYWIVSISMVYLNKVLMTNSEFSIPAP
LFMTWFQCFFTTCLCYVCGELGEVQRRKGKATGYFMQFPAMRYTGTVARK
VGVLSLVFVGMMTFNNLCLKYVEVSFYNVARSLTIVFNVLLSLAILRTFV
SLPTVACLFLVFVGFWVGADGEVNFSLLGTLSGVTSSLFVSLNSIYTKKV
LPAVNDNQWVLTFVNNFNACILFLPLIFFLELPILLQHWTTLFSPLFWTG
MCLSGLLGFAIGTVTVMQIKATSPLTHNISGTAKAAVQSLLAFYLWGNPA
TTKSLLGIALVLGGSSAYTFVAMREAEKKRRTSGLAGGGGGSKSNGSTEV
GALLPVKSPGATGSGAGVKLTGA back to topmRNA from alignment at CM002465.1:879042..881111- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5388 ID=rna5388|Name=rna5388|organism=Nannochloropsis gaditana|type=mRNA|length=2070bp|location=Sequence derived from alignment at CM002465.1:879042..881111- (Nannochloropsis gaditana)
CGACTTGAGAAACGATGCAATGGCCTGTAGATTTGAAAATAGACGATAAT
TTCAACCTCTGTTGTGGGCAGAAATGTGCCAGCTTGGTTTTGATTTCTGC
GAGGCCCATGCTACTATGCACTCCAAGCCGTCGCCCAAAAGAGTACCGCC
TTCGCCTTCGAACTGCTCTATTATCTCTTTTGAATGACACTCTGCACACG
ATGGGCCCGGCATGTGTGAAGCCTACTTTACATTGTTCATGGCCTCTTCA
TTTTTGTGTTACTCTGGAAAACTGAGTTCGATTTTTGGTGCCGGGATGAT
GCTGAATGTCTTGTTGTTTTCGCTCTTTTCAAATGAACATGGGGCACGTA
CAGTTACACGGAAGAAAATGTATCGCGCATCCAAGTCTTTTCGTGGACAA
AGTACAGAACATGATAACATGCGTCCTTGATGTTCGAATTTGTAGGCAAG
TAAATCTACTGACGTGCCACCGGGGGGAAAACTCCTTAGTCCTGGTTGAC
GCTGCGCTTCCTTTCCTTCCAAAGCGCACCGATACCACGTGACAAGGCTG
ACAAAAAGGAAGATTAAGGTGTGCAAGGTCTTCCCCAAATCATGCGCTTT
ATCCGAACTCTGGTCTCTGTGAATCACGTAAATTTTTGTTTTCGCACCTC
AACAGGTCGTTCTCCTGCCTGGCTGCCCCCGACGTCATGTCTGTCGGGCA
CAGCAAAAGCGCGGCTCACGCAGCCAATATGAAGCACATCGCCTCAGTTG
TGGCCGCCTACTGGATTGTGTCCATTAGCATGGTGTACCTGAACAAGGTC
TTGATGACAAACTCGGAATTCTCCATTCCCGCCCCGCTCTTCATGACCTG
GTTTCAATGCTTCTTCACCACGTGCCTGTGCTACGTCTGCGGCGAGTTGG
GGGAGGTGCAACGTCGGAAAGGAAAAGCCACTGGGTACTTCATGCAGTTC
CCCGCCATGCGGTACACGGGGACGGTGGCTCGGAAGGTAGGGGTACTCTC
CCTGGTGTTTGTGGGCATGATGACCTTCAACAACCTCTGCCTCAAGTACG
TCGAGGTCTCCTTCTACAACGTTGCCCGCTCCCTCACCATCGTCTTCAAC
GTCCTCCTCTCCCTGGCCATCCTCCGGACCTTCGTCTCCCTCCCCACGGT
CGCCTGCCTCTTCCTGGTCTTCGTGGGGTTCTGGGTGGGCGCCGACGGGG
AAGTGAACTTCTCGCTCCTCGGGACCTTGTCGGGTGTCACCTCCTCCCTC
TTCGTCTCCCTCAACAGCATCTACACGAAGAAGGTCCTCCCCGCCGTGAA
CGACAACCAATGGGTCCTCACCTTCGTCAACAACTTCAACGCCTGCATTC
TCTTTTTGCCCCTCATCTTTTTCCTCGAGCTCCCGATCCTCCTTCAACAC
TGGACCACCCTCTTCTCGCCCCTTTTCTGGACCGGCATGTGCCTGTCCGG
CCTTTTGGGCTTCGCGATCGGCACGGTGACGGTCATGCAAATCAAGGCGA
CTTCCCCGCTCACCCACAACATCAGCGGTACCGCCAAAGCCGCCGTTCAA
TCCCTTTTGGCCTTCTATTTGTGGGGCAATCCCGCCACAACCAAGAGCCT
GTTGGGCATCGCCTTGGTCTTGGGCGGCTCCTCTGCCTACACCTTCGTGG
CCATGCGAGAGGCGGAGAAGAAACGCCGGACGTCGGGCCTGGCGGGGGGA
GGGGGCGGCAGCAAGAGCAATGGGAGCACGGAGGTCGGGGCATTGCTGCC
TGTAAAGAGTCCCGGCGCGACGGGAAGTGGGGCGGGCGTCAAGTTGACAG
GGGCCTAGGAGGGGGGGGGAGGACGGAAGGAGGAAGGAGAGGGGGAGTCA
AGAAGTACATAGGAAAAGCCGACGAGGGAGGCAACGGGAGGAGAAATCGG
GAGGGGGAAAAAATGGCGCGAAAGCATTCGGACAACGCGAGGTGATTCGC
CCCTCGCGTACACTCGAAGAACGCAAGCGAAGACCGGGGGGTTTCCCCCT
CCATGTTCATGCCTTCCTTTTTATTTATTTATGTATGCCTTGCTGTGCCG
CCTTTGTCGTTCATCTTCTG back to topCoding sequence (CDS) from alignment at CM002465.1:879042..881111- >rna5388 ID=rna5388|Name=rna5388|organism=Nannochloropsis gaditana|type=CDS|length=1122bp|location=Sequence derived from alignment at CM002465.1:879042..881111- (Nannochloropsis gaditana)
ATGTCTGTCGGGCACAGCAAAAGCGCGGCTCACGCAGCCAATATGAAGCA
CATCGCCTCAGTTGTGGCCGCCTACTGGATTGTGTCCATTAGCATGGTGT
ACCTGAACAAGGTCTTGATGACAAACTCGGAATTCTCCATTCCCGCCCCG
CTCTTCATGACCTGGTTTCAATGCTTCTTCACCACGTGCCTGTGCTACGT
CTGCGGCGAGTTGGGGGAGGTGCAACGTCGGAAAGGAAAAGCCACTGGGT
ACTTCATGCAGTTCCCCGCCATGCGGTACACGGGGACGGTGGCTCGGAAG
GTAGGGGTACTCTCCCTGGTGTTTGTGGGCATGATGACCTTCAACAACCT
CTGCCTCAAGTACGTCGAGGTCTCCTTCTACAACGTTGCCCGCTCCCTCA
CCATCGTCTTCAACGTCCTCCTCTCCCTGGCCATCCTCCGGACCTTCGTC
TCCCTCCCCACGGTCGCCTGCCTCTTCCTGGTCTTCGTGGGGTTCTGGGT
GGGCGCCGACGGGGAAGTGAACTTCTCGCTCCTCGGGACCTTGTCGGGTG
TCACCTCCTCCCTCTTCGTCTCCCTCAACAGCATCTACACGAAGAAGGTC
CTCCCCGCCGTGAACGACAACCAATGGGTCCTCACCTTCGTCAACAACTT
CAACGCCTGCATTCTCTTTTTGCCCCTCATCTTTTTCCTCGAGCTCCCGA
TCCTCCTTCAACACTGGACCACCCTCTTCTCGCCCCTTTTCTGGACCGGC
ATGTGCCTGTCCGGCCTTTTGGGCTTCGCGATCGGCACGGTGACGGTCAT
GCAAATCAAGGCGACTTCCCCGCTCACCCACAACATCAGCGGTACCGCCA
AAGCCGCCGTTCAATCCCTTTTGGCCTTCTATTTGTGGGGCAATCCCGCC
ACAACCAAGAGCCTGTTGGGCATCGCCTTGGTCTTGGGCGGCTCCTCTGC
CTACACCTTCGTGGCCATGCGAGAGGCGGAGAAGAAACGCCGGACGTCGG
GCCTGGCGGGGGGAGGGGGCGGCAGCAAGAGCAATGGGAGCACGGAGGTC
GGGGCATTGCTGCCTGTAAAGAGTCCCGGCGCGACGGGAAGTGGGGCGGG
CGTCAAGTTGACAGGGGCCTAG back to top
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