|
|
Properties
| Property Name | Value |
|---|
| Product | Glucose-fructose oxidoreductase |
| Orig transcript id | gnl|cribi|Naga_100964g1.7278.mrna |
| Orig protein id | gnl|cribi|Naga_100964g1.7278 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:865827..867819 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5384 ID=rna5384|Name=rna5384|organism=Nannochloropsis gaditana|type=mRNA|length=2388bp
AGGGTTTGTCATTTCTCGTTTCCTCCGGCTGTCCCATGCTGTAGACATGT
GTACGTAGCTAGAAGGAGCCCCCATATGTTCTTTCCGACGATACACATGG
CTTTAATACTATCCCCATAGTGACAAAGCGTGGACACAGAAACACACACA
CATGCCACTCACATAGAAACGGCCAATCCACGATCGTTACATCTCCGCTT
TCGTTTCCGGCAACGACTTGAATAATTGGGGCATCTGCTCACGCTCGTTT
TACCCGACCGCAAAAAAAAATGGAGAGTGGCCACCATGCTTCAAGGAGAA
GCTCGGTATATGTCCATCCCGCGTGCCTGCAAAGACAAGGTGAAGATGCA
CCCGGCGACCATAGTGTGTCATGTACCTGTTTGACGTTTACTACAGGGTG
CCATGCTTTATTGGCTGGAATTGTGGACGCTTGTTTTCTGGAATACGAAT
ATTTCCCCGCCCTGTATTAATTCCCTTCAAGCAGCAAGCTATCTTAACAA
ACGTTGTGCGGCCAAAGGAAAATAGCCGCCGAGTCCATATGGGGTCTTCT
GACTTCAAAATCTCGCGCATTCCAACGTGTAAATGTGCGATCGAAAGAGA
AAGCATTGACACAGGGAATAAAAACTCCATCAATTGGAAAGATCTCTGGA
ATCGGTGGCACCCTGTTCCGTGAAGAAGCGAAGCTTTGCTTGCGGCCGTA
TGCTCATTACTCACCCACTGACTCGTTCACATAATAAAAGTCCCGCTAAA
ACCCTACAATTTCGCTTCCGACGCTCCATCATTCCATCATAGAAATTGAC
AGGTCTACTGAAATCATAGTTCCACCCGTTGGTGCGTGTCCTTCCTGCAA
TGTCAAACATCTCCTCAAGCAGCGCGTGGGCTGCGGAGGCCGAGCTCGCG
GCCCATGGTGGCGACATAAGTCGGGAGGCGGGCATACGACCTATAGATTC
CATCAATACCATATCTGGCCCTACAATCACACATTATCCACCTCAGTCGC
TACGTTGCCGCCGCAAGTCGTTCGCCGAGTCTTTATATCGTGCACTCCTT
CGCCTGGACCCCGCCCGAAAGCCACGAATCCAAGCTGTCTTCCGCTACTT
CAAGAACCACAAAGATCTTTCCCAAGATCAAGTCCATCATTCACTCATCG
CTGCACTGGGTATTCATATCGTGCGCAAAGCTTGGACCGAGGCCCGGGCT
GATATTCACGAGCTTCTCGTTGTTGAACCTGGGGACAACAATCATACCTT
AGAGAATAAGAGCTCCCTCGTCGCCGCAGCGCCCCCGTCCGAGGACCCTC
CGGTTGAAATGGGAACTGTCCCTGCTCCACCGACCTCCCCTCAGAGACAG
GAAGAGAAGAAATACACCTATCATCCTGGAGAGGAGAGGAAGGAAGCAAG
AGACAGAAAGGAAAAAGTGCTCAAGTTTCGCTTTCGTCACGGCCTGGGTA
ACGAGGACGGCCAGCTTGCGCATCCACCATTCAACGCCTGTATCACATCC
ATGGAGGATGATGTCCAGCTAAACGTTGAGGATGATCTGGCCGACAAGGC
GCCACATGCCTTCGTTTGTCCCATTTCACTAGAGCTGATGACACGCGCGG
TGGTTGCCGGCGACGGCTTTGCCTATCAACAGGAGGCCTTGGATGAATGG
ATTCTGCAGAAACGTCGAGAGCATTTCCCACTTCATTCACCCATGACTAA
TGCACCGATGGCACCTTTTTATATTCCATCATTTACACTCCGGAGTCTCA
TTGGGGACTACGTAGAAAAAGTGCGGACGAAAAGGCCGCGAGTAGATTAA
GACGCGAGGGAGCTTAAGCTCAAATTGATGGGAGGTTGGACGTCGGATAT
GGCACAAGGAATGAAAACATGGAATATGAAGAGAGGAGATTGCCACCAAA
ACAGTGAGAAAGGTCTGCTTCCTATTTTGCACAGACCATGAGTGAATTGG
ACAACCTACGACAGCAACGAATAGTCATCTTATAGACATACATCATAACG
ATCTTTCCTAATGGCTCTTGCTTTACAGCAATGATTGTGGTGTATATGGT
TTGAAGACAGCGAAAAGGCTCACAAAGGGTGTCGACTTTCTGCAAGCGTC
GGGAGATCTGTCTTGACAAGGCAAGTCCATATATGCAAGATATTTTATAG
ATGAATGTATAGCCCCTTTCAAAGGGCAGGACGCTTTTAAAAGATTTCCT
TTCAAAGAGCGGAGAGATTTTAGAAAGAATGAAAAGATGACGTGATAGAT
TGACAAGGCGATATACCAATGAGATGCACAGTCTTTAAGACTTGAAACAC
GAGAAGATATCGCGAATAAATGGCGACATCACAAAGCGAAAAAAATTCTT
TTGTACACTTTTCATCATGGAAACTTCTTAAAAATCCC back to topprotein sequence of rna5384 >rna5384-protein ID=rna5384-protein|Name=rna5384|organism=Nannochloropsis gaditana|type=polypeptide|length=359bp
MSTHHHLQSGRRRLSSHHSLDAADDYVAGYAILGSASIARKLWKAMFMSG
NSRVVCVASRDTARAQAFIDECQALLPFPQAPEAVEGYEAALARDDVQCV
YIPLPTALRKEWVLKAAASGKHVLVEKPVGLNTEDVQEMIQACIKHNVHL
MDGVMFMHSARLQLLQKTLPSLGPLRRINSEFCFKANEAFFQSNIRCSSA
TEPLGCLGDLGWYNIRLTLWAMNWYLPVRARGCVLKENADGVPYEFSGEL
LFESGCSATFFCSFLTHETQLAVLNGEEASVQYSDFVLPLPGRYLYFDVN
HQSYQQEGLDQVVHSYSERHHVQEAGYGHPSAQEACMVRHLSDLSREGAG
RPPSGPSRC back to topmRNA from alignment at CM002465.1:865827..867819- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5384 ID=rna5384|Name=rna5384|organism=Nannochloropsis gaditana|type=mRNA|length=1993bp|location=Sequence derived from alignment at CM002465.1:865827..867819- (Nannochloropsis gaditana)
CATAACTACCGATGGGCAGGTATTTCTTTCGTCCAACATCTTGTTCGGTT
CAGACGGCTTGAAGAGAGCATGTGGAAATTATGCAGGTTGCATGACAGGA
TCATAGAGAATGATGGCATCGGTATAAGTTTGTTGTTTGGCGTGTAATCA
AGCCCAGCTTGTAGCGGTCTCATTCCCACTTCGTTTTTCATTACAAGGTA
ACATGAGCACTCACCACCATCTACAAAGCGGCCGTCGACGCCTCAGCAGT
CATCATTCTCTTGATGCGGCGGATGATTATGTAGCCGGGTATGCCATCTT
GGGGAGTGCGAGCATTGCACGTAAATTGTGGAAAGCGATGTTCATGAGCG
GCAACTCTCGTGTCGTCTGTGTTGCGTCACGAGACACCGCACGCGCGCAA
GCATTCATCGACGAATGCCAAGCATTGCTGCCTTTTCCTCAAGCACCTGA
AGCTGTGGAGGGTTATGAAGCGGCGTTGGCCAGGGACGACGTCCAATGCG
TGTATATCCCCTTACCGACCGCGCTTCGGAAGGAATGGGTGCTAAAAGCA
GCGGCGAGTGGCAAGCACGTACTGGTCGAAAAACCAGTGGGTCTGAACAC
GGAGGACGTACAAGAAATGATCCAGGCGTGCATCAAGGTATGTATAGCGA
AAAAAAAGACGCAGGAGGCAGATAAGCCCTACTGAGCAAGGCCGATTGAG
ACGGTGCATGCGATCTCCATTTGGTCTCCTCTCTTACCCCCGCCCCGTAC
GCATTTTCCTTCACCTCCAGCACAATGTCCACCTGATGGACGGGGTCATG
TTCATGCATTCGGCGCGCTTGCAGCTCCTGCAGAAAACCTTGCCAAGTCT
GGGGCCCCTGCGTCGTATCAACAGCGAATTCTGCTTCAAAGCCAACGAGG
CCTTCTTTCAGAGCAACATCCGATGCTCCAGTGCCACGGAGCCGCTGGGT
TGTCTAGGAGATCTGGGGTATGTGGCGTGGGGGGGGGAAGCGACGTGGTT
ATCACGGCCAGCGTCGTCCTTCTCGAATTGCAAAGCCCCGCCGCAATAGT
CATGTCCTGAGCCCTCCTTGCCCTCCCCCTCCTTCTCTTCCTCCCCCTCC
TTCCCTTCCTCCCCCGGTCCAGATGGTACAACATCCGCTTGACCCTGTGG
GCTATGAATTGGTACCTCCCTGTCCGTGCTCGTGGCTGCGTGCTGAAAGA
GAACGCCGACGGTGTCCCCTACGAGTTTTCGGGCGAGCTGCTCTTCGAGT
CTGGGTGCTCCGCCACTTTCTTCTGTTCCTTTCTCACGCACGAGACGCAA
TTGGCGGTACGTGCGTTCAGGGCGGGCGTGGATCTAGGTCGATGGATAGG
GGGATGGATCGATACATCGAGAGATCCTGAATGGCGTTCCTGATTTAAGA
GGAACGGGTGTTGCCAGAAGCTTCCTTGGCTCCTCGCTGACTTGATGTTT
GTCGCGCCTCCCACATGTCTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTT
TCTTCCTTCCTTCCTTCCTTCCTTCCTGGCACTGCGCAGGTCCTGAACGG
GGAGGAAGCCTCGGTGCAGTACTCGGACTTCGTCCTCCCGCTGCCAGGGC
GCTACCTCTACTTCGACGTCAATCACCAGAGCTACCAGCAAGAAGGACTC
GATCAGGTCACCAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGAGGGGTTGGGAGCATATTGGAGGGACCACCCTGACAGACCTTGGGG
CATGACGGTGTACTGATGACCGTCACCCGCCTCACCTCCCCCCCCGCAGG
TTGTGCACAGTTACAGCGAGCGCCACCACGTCCAAGAGGCTGGCTACGGC
CACCCCTCGGCTCAGGAAGCCTGCATGGTCCGGCACTTGTCAGATTTGTC
CCGGGAGGGGGCGGGGAGACCACCAAGTGGCCCGAGCAGATGCTGAAGAC
GCAGATGGTTCTGGACGCCGTCCTCCTCAGTGCCAGGGCCCGG back to topCoding sequence (CDS) from alignment at CM002465.1:865827..867819- >rna5384 ID=rna5384|Name=rna5384|organism=Nannochloropsis gaditana|type=CDS|length=5400bp|location=Sequence derived from alignment at CM002465.1:865827..867819- (Nannochloropsis gaditana)
GTTGTGCACAGTTACAGCGAGCGCCACCACGTCCAAGAGGCTGGCTACGG
CCACCCCTCGGCTCAGGAAGCCTGCATGGTCCGGCACTTGTCAGATTTGT
CCCGGGAGGGGGCGGGGAGACCACCAAGTGGCCCGAGCAGATGCTGAGTC
CTGAACGGGGAGGAAGCCTCGGTGCAGTACTCGGACTTCGTCCTCCCGCT
GCCAGGGCGCTACCTCTACTTCGACGTCAATCACCAGAGCTACCAGCAAG
AAGGACTCGATCAGATGGTACAACATCCGCTTGACCCTGTGGGCTATGAA
TTGGTACCTCCCTGTCCGTGCTCGTGGCTGCGTGCTGAAAGAGAACGCCG
ACGGTGTCCCCTACGAGTTTTCGGGCGAGCTGCTCTTCGAGTCTGGGTGC
TCCGCCACTTTCTTCTGTTCCTTTCTCACGCACGAGACGCAATTGGCGCA
CAATGTCCACCTGATGGACGGGGTCATGTTCATGCATTCGGCGCGCTTGC
AGCTCCTGCAGAAAACCTTGCCAAGTCTGGGGCCCCTGCGTCGTATCAAC
AGCGAATTCTGCTTCAAAGCCAACGAGGCCTTCTTTCAGAGCAACATCCG
ATGCTCCAGTGCCACGGAGCCGCTGGGTTGTCTAGGAGATCTGGGATGAG
CACTCACCACCATCTACAAAGCGGCCGTCGACGCCTCAGCAGTCATCATT
CTCTTGATGCGGCGGATGATTATGTAGCCGGGTATGCCATCTTGGGGAGT
GCGAGCATTGCACGTAAATTGTGGAAAGCGATGTTCATGAGCGGCAACTC
TCGTGTCGTCTGTGTTGCGTCACGAGACACCGCACGCGCGCAAGCATTCA
TCGACGAATGCCAAGCATTGCTGCCTTTTCCTCAAGCACCTGAAGCTGTG
GAGGGTTATGAAGCGGCGTTGGCCAGGGACGACGTCCAATGCGTGTATAT
CCCCTTACCGACCGCGCTTCGGAAGGAATGGGTGCTAAAAGCAGCGGCGA
GTGGCAAGCACGTACTGGTCGAAAAACCAGTGGGTCTGAACACGGAGGAC
GTACAAGAAATGATCCAGGCGTGCATCAAGGTTGTGCACAGTTACAGCGA
GCGCCACCACGTCCAAGAGGCTGGCTACGGCCACCCCTCGGCTCAGGAAG
CCTGCATGGTCCGGCACTTGTCAGATTTGTCCCGGGAGGGGGCGGGGAGA
CCACCAAGTGGCCCGAGCAGATGCTGAGTCCTGAACGGGGAGGAAGCCTC
GGTGCAGTACTCGGACTTCGTCCTCCCGCTGCCAGGGCGCTACCTCTACT
TCGACGTCAATCACCAGAGCTACCAGCAAGAAGGACTCGATCAGATGGTA
CAACATCCGCTTGACCCTGTGGGCTATGAATTGGTACCTCCCTGTCCGTG
CTCGTGGCTGCGTGCTGAAAGAGAACGCCGACGGTGTCCCCTACGAGTTT
TCGGGCGAGCTGCTCTTCGAGTCTGGGTGCTCCGCCACTTTCTTCTGTTC
CTTTCTCACGCACGAGACGCAATTGGCGCACAATGTCCACCTGATGGACG
GGGTCATGTTCATGCATTCGGCGCGCTTGCAGCTCCTGCAGAAAACCTTG
CCAAGTCTGGGGCCCCTGCGTCGTATCAACAGCGAATTCTGCTTCAAAGC
CAACGAGGCCTTCTTTCAGAGCAACATCCGATGCTCCAGTGCCACGGAGC
CGCTGGGTTGTCTAGGAGATCTGGGATGAGCACTCACCACCATCTACAAA
GCGGCCGTCGACGCCTCAGCAGTCATCATTCTCTTGATGCGGCGGATGAT
TATGTAGCCGGGTATGCCATCTTGGGGAGTGCGAGCATTGCACGTAAATT
GTGGAAAGCGATGTTCATGAGCGGCAACTCTCGTGTCGTCTGTGTTGCGT
CACGAGACACCGCACGCGCGCAAGCATTCATCGACGAATGCCAAGCATTG
CTGCCTTTTCCTCAAGCACCTGAAGCTGTGGAGGGTTATGAAGCGGCGTT
GGCCAGGGACGACGTCCAATGCGTGTATATCCCCTTACCGACCGCGCTTC
GGAAGGAATGGGTGCTAAAAGCAGCGGCGAGTGGCAAGCACGTACTGGTC
GAAAAACCAGTGGGTCTGAACACGGAGGACGTACAAGAAATGATCCAGGC
GTGCATCAAGGTTGTGCACAGTTACAGCGAGCGCCACCACGTCCAAGAGG
CTGGCTACGGCCACCCCTCGGCTCAGGAAGCCTGCATGGTCCGGCACTTG
TCAGATTTGTCCCGGGAGGGGGCGGGGAGACCACCAAGTGGCCCGAGCAG
ATGCTGAGTCCTGAACGGGGAGGAAGCCTCGGTGCAGTACTCGGACTTCG
TCCTCCCGCTGCCAGGGCGCTACCTCTACTTCGACGTCAATCACCAGAGC
TACCAGCAAGAAGGACTCGATCAGATGGTACAACATCCGCTTGACCCTGT
GGGCTATGAATTGGTACCTCCCTGTCCGTGCTCGTGGCTGCGTGCTGAAA
GAGAACGCCGACGGTGTCCCCTACGAGTTTTCGGGCGAGCTGCTCTTCGA
GTCTGGGTGCTCCGCCACTTTCTTCTGTTCCTTTCTCACGCACGAGACGC
AATTGGCGCACAATGTCCACCTGATGGACGGGGTCATGTTCATGCATTCG
GCGCGCTTGCAGCTCCTGCAGAAAACCTTGCCAAGTCTGGGGCCCCTGCG
TCGTATCAACAGCGAATTCTGCTTCAAAGCCAACGAGGCCTTCTTTCAGA
GCAACATCCGATGCTCCAGTGCCACGGAGCCGCTGGGTTGTCTAGGAGAT
CTGGGATGAGCACTCACCACCATCTACAAAGCGGCCGTCGACGCCTCAGC
AGTCATCATTCTCTTGATGCGGCGGATGATTATGTAGCCGGGTATGCCAT
CTTGGGGAGTGCGAGCATTGCACGTAAATTGTGGAAAGCGATGTTCATGA
GCGGCAACTCTCGTGTCGTCTGTGTTGCGTCACGAGACACCGCACGCGCG
CAAGCATTCATCGACGAATGCCAAGCATTGCTGCCTTTTCCTCAAGCACC
TGAAGCTGTGGAGGGTTATGAAGCGGCGTTGGCCAGGGACGACGTCCAAT
GCGTGTATATCCCCTTACCGACCGCGCTTCGGAAGGAATGGGTGCTAAAA
GCAGCGGCGAGTGGCAAGCACGTACTGGTCGAAAAACCAGTGGGTCTGAA
CACGGAGGACGTACAAGAAATGATCCAGGCGTGCATCAAGGTTGTGCACA
GTTACAGCGAGCGCCACCACGTCCAAGAGGCTGGCTACGGCCACCCCTCG
GCTCAGGAAGCCTGCATGGTCCGGCACTTGTCAGATTTGTCCCGGGAGGG
GGCGGGGAGACCACCAAGTGGCCCGAGCAGATGCTGAGTCCTGAACGGGG
AGGAAGCCTCGGTGCAGTACTCGGACTTCGTCCTCCCGCTGCCAGGGCGC
TACCTCTACTTCGACGTCAATCACCAGAGCTACCAGCAAGAAGGACTCGA
TCAGATGGTACAACATCCGCTTGACCCTGTGGGCTATGAATTGGTACCTC
CCTGTCCGTGCTCGTGGCTGCGTGCTGAAAGAGAACGCCGACGGTGTCCC
CTACGAGTTTTCGGGCGAGCTGCTCTTCGAGTCTGGGTGCTCCGCCACTT
TCTTCTGTTCCTTTCTCACGCACGAGACGCAATTGGCGCACAATGTCCAC
CTGATGGACGGGGTCATGTTCATGCATTCGGCGCGCTTGCAGCTCCTGCA
GAAAACCTTGCCAAGTCTGGGGCCCCTGCGTCGTATCAACAGCGAATTCT
GCTTCAAAGCCAACGAGGCCTTCTTTCAGAGCAACATCCGATGCTCCAGT
GCCACGGAGCCGCTGGGTTGTCTAGGAGATCTGGGATGAGCACTCACCAC
CATCTACAAAGCGGCCGTCGACGCCTCAGCAGTCATCATTCTCTTGATGC
GGCGGATGATTATGTAGCCGGGTATGCCATCTTGGGGAGTGCGAGCATTG
CACGTAAATTGTGGAAAGCGATGTTCATGAGCGGCAACTCTCGTGTCGTC
TGTGTTGCGTCACGAGACACCGCACGCGCGCAAGCATTCATCGACGAATG
CCAAGCATTGCTGCCTTTTCCTCAAGCACCTGAAGCTGTGGAGGGTTATG
AAGCGGCGTTGGCCAGGGACGACGTCCAATGCGTGTATATCCCCTTACCG
ACCGCGCTTCGGAAGGAATGGGTGCTAAAAGCAGCGGCGAGTGGCAAGCA
CGTACTGGTCGAAAAACCAGTGGGTCTGAACACGGAGGACGTACAAGAAA
TGATCCAGGCGTGCATCAAGGTTGTGCACAGTTACAGCGAGCGCCACCAC
GTCCAAGAGGCTGGCTACGGCCACCCCTCGGCTCAGGAAGCCTGCATGGT
CCGGCACTTGTCAGATTTGTCCCGGGAGGGGGCGGGGAGACCACCAAGTG
GCCCGAGCAGATGCTGAGTCCTGAACGGGGAGGAAGCCTCGGTGCAGTAC
TCGGACTTCGTCCTCCCGCTGCCAGGGCGCTACCTCTACTTCGACGTCAA
TCACCAGAGCTACCAGCAAGAAGGACTCGATCAGATGGTACAACATCCGC
TTGACCCTGTGGGCTATGAATTGGTACCTCCCTGTCCGTGCTCGTGGCTG
CGTGCTGAAAGAGAACGCCGACGGTGTCCCCTACGAGTTTTCGGGCGAGC
TGCTCTTCGAGTCTGGGTGCTCCGCCACTTTCTTCTGTTCCTTTCTCACG
CACGAGACGCAATTGGCGCACAATGTCCACCTGATGGACGGGGTCATGTT
CATGCATTCGGCGCGCTTGCAGCTCCTGCAGAAAACCTTGCCAAGTCTGG
GGCCCCTGCGTCGTATCAACAGCGAATTCTGCTTCAAAGCCAACGAGGCC
TTCTTTCAGAGCAACATCCGATGCTCCAGTGCCACGGAGCCGCTGGGTTG
TCTAGGAGATCTGGGATGAGCACTCACCACCATCTACAAAGCGGCCGTCG
ACGCCTCAGCAGTCATCATTCTCTTGATGCGGCGGATGATTATGTAGCCG
GGTATGCCATCTTGGGGAGTGCGAGCATTGCACGTAAATTGTGGAAAGCG
ATGTTCATGAGCGGCAACTCTCGTGTCGTCTGTGTTGCGTCACGAGACAC
CGCACGCGCGCAAGCATTCATCGACGAATGCCAAGCATTGCTGCCTTTTC
CTCAAGCACCTGAAGCTGTGGAGGGTTATGAAGCGGCGTTGGCCAGGGAC
GACGTCCAATGCGTGTATATCCCCTTACCGACCGCGCTTCGGAAGGAATG
GGTGCTAAAAGCAGCGGCGAGTGGCAAGCACGTACTGGTCGAAAAACCAG
TGGGTCTGAACACGGAGGACGTACAAGAAATGATCCAGGCGTGCATCAAG back to top
|