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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100281g10.5089.mrna |
| Orig protein id | gnl|cribi|Naga_100281g10.5089 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:803545..805218 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5361 ID=rna5361|Name=rna5361|organism=Nannochloropsis gaditana|type=mRNA|length=267bp
ATGGAGTGTCTGGGAACCGAGCCTACCTGCGCGCGTACCACGCGGGCATG
CCGGCGATCTATGCCCAGAGCGAGGTCTTCGACCTGTTGCCGTCATCTGT
GCTTGAGCTTTAGGAGGCCTGCACTCTGTGAGAATTGGTTTCCGAGATGG
GCTGGTCGTTGGAAGCCCTTGGGCCCTCTTCCAGTTTTCAATACACACCA
AAGTAAAAGCATCAAAATTAACAATTTGAACTATATAATGAGAGAAAGAG
AGAAATTTAGCTCTTAG back to topprotein sequence of rna5361 >rna5361-protein ID=rna5361-protein|Name=rna5361|organism=Nannochloropsis gaditana|type=polypeptide|length=417bp
MASGMLPSDPQLGQAPRRRRRVLLISLGALCLIVVGALAIGFGFKGKDND
KSISTHGNKHGPATEAVSSMADTKNTIVPSAPESAPATVVEPVKAPVSES
KPSAPATTTKVDDSDKILTFGDGERNPLGPLFGALPGAAAINGAFNTLAA
SAANLAGLQVCYPQNGEELKGMTESGSSCSVIILKKGSSDKYTLPSTVIV
TSRKIVLGHPIDLPQIHPDKEVYRLFEVKPGGSLDIRFVSLFRPSPRKVD
ENLSVIVAGVALVELGGYMRGTACIFRQPAQTFEAFVKSLETPFARKRIV
GGFVLVLGGTFFCYGCQAVRWAPYGSPNVNVVQIGRDYLVMAGSNVCIGC
YHVAYSPYGSAISVGNAMGVFGGVNIRIGGGTIGSSVLKGQFGAGQNLFV
GGGVLVNVGHQQQTAFE back to topmRNA from alignment at CM002465.1:803545..805218- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5361 ID=rna5361|Name=rna5361|organism=Nannochloropsis gaditana|type=mRNA|length=1674bp|location=Sequence derived from alignment at CM002465.1:803545..805218- (Nannochloropsis gaditana)
ATGGCCAGTGGTATGCTTCCTAGCGACCCGCAACTAGGGCAGGCCCCCCG
CCGCCGTCGTCGGGTCCTGCTGATTTCTCTTGGTGCACTGTGCCTCATCG
TGGTCGGTGCTTTAGCCATTGGCTTCGGATTTAAGGGCAAAGACAACGAT
AAGAGCATATCAACGCATGGCAATAAGCACGGGCCCGCAACGGAAGCGGT
TTCTTCAATGGCTGACACGAAGAACACGATCGTCCCCTCCGCACCCGAAT
CAGGTACGTGTGAAAGTGTAAAATTGAGGAAAGACCAGAGTTGAAATTAG
AAACTGATTTGATACTCGGTAGCCTTGAAGTACATGGGTATCTCCTGGGT
CCATTTGAAATTTTTAATAAAGCTACCTATTGCAGATCATTGTTGAGTCT
GACAATTGTTATTCTATGACGTACTGCTACTAAAAGCTGAGACGTGTGCG
TTCCTTGATTTTGAGCAAGATCGTTCGTTCTGCTCGCTGCTTTGACATGG
TGCACATATAATCTATTACCCCTATCACAGCGCCGGCTACTGTTGTGGAG
CCCGTGAAAGCTCCTGTTTCCGAGTCCAAGCCCAGTGCTCCCGCGACTAC
CACAAAGGTAGACGACTCTGACAAGATCCTGACGTTTGGGGACGGAGAGA
GGAACCCCCTCGGTCCTTTGTTCGGTGCTCTGCCTGGCGCTGCGGCTATC
AATGGCGCTTTCAATACCCTGGCTGCCAGCGCTGCCAATCTGGCTGGCTT
GCAAGTCTGCTATCCTCAGAACGGTGAGGAGCTGAAAGGGATGACGGAAA
GCGGGAGCTCCTGCAGCGTGATCATTTTGAAGAAGGGGTCGTCCGACAAG
TACACTTTACCCTCGACTGTAATCGTAACCTCTCGTAAGATCGTCTTGGG
TCATCCCATCGACCTTCCGCAGATCCATCCTGACAAGGAAGTGTACCGCC
TTTTCGAGGTGAAGCCTGGCGGCAGCTTGGATATTCGTTTCGTGAGCCTC
TTCCGCCCGTCTCCACGGAAGGTGGACGAGAACCTTAGTGTTATCGTTGC
GGGCGTTGCGCTTGTGGAGCTGGGGGGCTACATGCGGGGCACAGCTTGTA
TTTTCCGACAGCCCGCGCAAACATTTGAAGCTTTCGTGAAATCACTCGAA
ACCCCCTTTGCACGCAAACGCATTGTGGGTGGTTTCGTCTTGGTTCTGGG
AGGGACTTTCTTTTGCTATGGATGTCAAGCTGTTCGCTGGGCACCTTACG
GGTCGCCTAATGTCAATGTTGTCCAGATCGGACGGGATTATCTAGTCATG
GCCGGCTCGAATGTGTGCATCGGATGCTATCACGTTGCCTATTCACCCTA
CGGTTCTGCAATCAGTGTGGGAAATGCCATGGGAGTCTTTGGTGGCGTGA
ATATCCGAATTGGAGGCGGAACGATCGGATCCTCCGTGCTAAAAGGACAG
TTTGGTGAGTAAAACAAAGTGGATGCATTGTATATGAGATATCGCTTCTG
CATACACATTAATGGAGGAAAACAACAACTCATCATATTTATGACACCTA
GGTGCTGGACAAAATTTATTCGTCGGCGGCGGAGTGCTTGTGAATGTGGG
TCACCAGCAGCAGACTGCTTTTGTCTGCCTCATTCGTGCAGGATATGCCA
TGACTGCTGTTGGATCAGGAGTAA back to topCoding sequence (CDS) from alignment at CM002465.1:803545..805218- >rna5361 ID=rna5361|Name=rna5361|organism=Nannochloropsis gaditana|type=CDS|length=5016bp|location=Sequence derived from alignment at CM002465.1:803545..805218- (Nannochloropsis gaditana)
GAGTAAGTGCTGGACAAAATTTATTCGTCGGCGGCGGAGTGCTTGTGAAT
GTGGGTCACCAGCAGCAGACTGCTTTTCGCCGGCTACTGTTGTGGAGCCC
GTGAAAGCTCCTGTTTCCGAGTCCAAGCCCAGTGCTCCCGCGACTACCAC
AAAGGTAGACGACTCTGACAAGATCCTGACGTTTGGGGACGGAGAGAGGA
ACCCCCTCGGTCCTTTGTTCGGTGCTCTGCCTGGCGCTGCGGCTATCAAT
GGCGCTTTCAATACCCTGGCTGCCAGCGCTGCCAATCTGGCTGGCTTGCA
AGTCTGCTATCCTCAGAACGGTGAGGAGCTGAAAGGGATGACGGAAAGCG
GGAGCTCCTGCAGCGTGATCATTTTGAAGAAGGGGTCGTCCGACAAGTAC
ACTTTACCCTCGACTGTAATCGTAACCTCTCGTAAGATCGTCTTGGGTCA
TCCCATCGACCTTCCGCAGATCCATCCTGACAAGGAAGTGTACCGCCTTT
TCGAGGTGAAGCCTGGCGGCAGCTTGGATATTCGTTTCGTGAGCCTCTTC
CGCCCGTCTCCACGGAAGGTGGACGAGAACCTTAGTGTTATCGTTGCGGG
CGTTGCGCTTGTGGAGCTGGGGGGCTACATGCGGGGCACAGCTTGTATTT
TCCGACAGCCCGCGCAAACATTTGAAGCTTTCGTGAAATCACTCGAAACC
CCCTTTGCACGCAAACGCATTGTGGGTGGTTTCGTCTTGGTTCTGGGAGG
GACTTTCTTTTGCTATGGATGTCAAGCTGTTCGCTGGGCACCTTACGGGT
CGCCTAATGTCAATGTTGTCCAGATCGGACGGGATTATCTAGTCATGGCC
GGCTCGAATGTGTGCATCGGATGCTATCACGTTGCCTATTCACCCTACGG
TTCTGCAATCAGTGTGGGAAATGCCATGGGAGTCTTTGGTGGCGTGAATA
TCCGAATTGGAGGCGGAACGATCGGATCCTCCGTGCTAAAAGGACAGTTT
GATGGCCAGTGGTATGCTTCCTAGCGACCCGCAACTAGGGCAGGCCCCCC
GCCGCCGTCGTCGGGTCCTGCTGATTTCTCTTGGTGCACTGTGCCTCATC
GTGGTCGGTGCTTTAGCCATTGGCTTCGGATTTAAGGGCAAAGACAACGA
TAAGAGCATATCAACGCATGGCAATAAGCACGGGCCCGCAACGGAAGCGG
TTTCTTCAATGGCTGACACGAAGAACACGATCGTCCCCTCCGCACCCGAA
TCAGGAGTAAGTGCTGGACAAAATTTATTCGTCGGCGGCGGAGTGCTTGT
GAATGTGGGTCACCAGCAGCAGACTGCTTTTCGCCGGCTACTGTTGTGGA
GCCCGTGAAAGCTCCTGTTTCCGAGTCCAAGCCCAGTGCTCCCGCGACTA
CCACAAAGGTAGACGACTCTGACAAGATCCTGACGTTTGGGGACGGAGAG
AGGAACCCCCTCGGTCCTTTGTTCGGTGCTCTGCCTGGCGCTGCGGCTAT
CAATGGCGCTTTCAATACCCTGGCTGCCAGCGCTGCCAATCTGGCTGGCT
TGCAAGTCTGCTATCCTCAGAACGGTGAGGAGCTGAAAGGGATGACGGAA
AGCGGGAGCTCCTGCAGCGTGATCATTTTGAAGAAGGGGTCGTCCGACAA
GTACACTTTACCCTCGACTGTAATCGTAACCTCTCGTAAGATCGTCTTGG
GTCATCCCATCGACCTTCCGCAGATCCATCCTGACAAGGAAGTGTACCGC
CTTTTCGAGGTGAAGCCTGGCGGCAGCTTGGATATTCGTTTCGTGAGCCT
CTTCCGCCCGTCTCCACGGAAGGTGGACGAGAACCTTAGTGTTATCGTTG
CGGGCGTTGCGCTTGTGGAGCTGGGGGGCTACATGCGGGGCACAGCTTGT
ATTTTCCGACAGCCCGCGCAAACATTTGAAGCTTTCGTGAAATCACTCGA
AACCCCCTTTGCACGCAAACGCATTGTGGGTGGTTTCGTCTTGGTTCTGG
GAGGGACTTTCTTTTGCTATGGATGTCAAGCTGTTCGCTGGGCACCTTAC
GGGTCGCCTAATGTCAATGTTGTCCAGATCGGACGGGATTATCTAGTCAT
GGCCGGCTCGAATGTGTGCATCGGATGCTATCACGTTGCCTATTCACCCT
ACGGTTCTGCAATCAGTGTGGGAAATGCCATGGGAGTCTTTGGTGGCGTG
AATATCCGAATTGGAGGCGGAACGATCGGATCCTCCGTGCTAAAAGGACA
GTTTGATGGCCAGTGGTATGCTTCCTAGCGACCCGCAACTAGGGCAGGCC
CCCCGCCGCCGTCGTCGGGTCCTGCTGATTTCTCTTGGTGCACTGTGCCT
CATCGTGGTCGGTGCTTTAGCCATTGGCTTCGGATTTAAGGGCAAAGACA
ACGATAAGAGCATATCAACGCATGGCAATAAGCACGGGCCCGCAACGGAA
GCGGTTTCTTCAATGGCTGACACGAAGAACACGATCGTCCCCTCCGCACC
CGAATCAGGAGTAAGTGCTGGACAAAATTTATTCGTCGGCGGCGGAGTGC
TTGTGAATGTGGGTCACCAGCAGCAGACTGCTTTTCGCCGGCTACTGTTG
TGGAGCCCGTGAAAGCTCCTGTTTCCGAGTCCAAGCCCAGTGCTCCCGCG
ACTACCACAAAGGTAGACGACTCTGACAAGATCCTGACGTTTGGGGACGG
AGAGAGGAACCCCCTCGGTCCTTTGTTCGGTGCTCTGCCTGGCGCTGCGG
CTATCAATGGCGCTTTCAATACCCTGGCTGCCAGCGCTGCCAATCTGGCT
GGCTTGCAAGTCTGCTATCCTCAGAACGGTGAGGAGCTGAAAGGGATGAC
GGAAAGCGGGAGCTCCTGCAGCGTGATCATTTTGAAGAAGGGGTCGTCCG
ACAAGTACACTTTACCCTCGACTGTAATCGTAACCTCTCGTAAGATCGTC
TTGGGTCATCCCATCGACCTTCCGCAGATCCATCCTGACAAGGAAGTGTA
CCGCCTTTTCGAGGTGAAGCCTGGCGGCAGCTTGGATATTCGTTTCGTGA
GCCTCTTCCGCCCGTCTCCACGGAAGGTGGACGAGAACCTTAGTGTTATC
GTTGCGGGCGTTGCGCTTGTGGAGCTGGGGGGCTACATGCGGGGCACAGC
TTGTATTTTCCGACAGCCCGCGCAAACATTTGAAGCTTTCGTGAAATCAC
TCGAAACCCCCTTTGCACGCAAACGCATTGTGGGTGGTTTCGTCTTGGTT
CTGGGAGGGACTTTCTTTTGCTATGGATGTCAAGCTGTTCGCTGGGCACC
TTACGGGTCGCCTAATGTCAATGTTGTCCAGATCGGACGGGATTATCTAG
TCATGGCCGGCTCGAATGTGTGCATCGGATGCTATCACGTTGCCTATTCA
CCCTACGGTTCTGCAATCAGTGTGGGAAATGCCATGGGAGTCTTTGGTGG
CGTGAATATCCGAATTGGAGGCGGAACGATCGGATCCTCCGTGCTAAAAG
GACAGTTTGATGGCCAGTGGTATGCTTCCTAGCGACCCGCAACTAGGGCA
GGCCCCCCGCCGCCGTCGTCGGGTCCTGCTGATTTCTCTTGGTGCACTGT
GCCTCATCGTGGTCGGTGCTTTAGCCATTGGCTTCGGATTTAAGGGCAAA
GACAACGATAAGAGCATATCAACGCATGGCAATAAGCACGGGCCCGCAAC
GGAAGCGGTTTCTTCAATGGCTGACACGAAGAACACGATCGTCCCCTCCG
CACCCGAATCAGGAGTAAGTGCTGGACAAAATTTATTCGTCGGCGGCGGA
GTGCTTGTGAATGTGGGTCACCAGCAGCAGACTGCTTTTCGCCGGCTACT
GTTGTGGAGCCCGTGAAAGCTCCTGTTTCCGAGTCCAAGCCCAGTGCTCC
CGCGACTACCACAAAGGTAGACGACTCTGACAAGATCCTGACGTTTGGGG
ACGGAGAGAGGAACCCCCTCGGTCCTTTGTTCGGTGCTCTGCCTGGCGCT
GCGGCTATCAATGGCGCTTTCAATACCCTGGCTGCCAGCGCTGCCAATCT
GGCTGGCTTGCAAGTCTGCTATCCTCAGAACGGTGAGGAGCTGAAAGGGA
TGACGGAAAGCGGGAGCTCCTGCAGCGTGATCATTTTGAAGAAGGGGTCG
TCCGACAAGTACACTTTACCCTCGACTGTAATCGTAACCTCTCGTAAGAT
CGTCTTGGGTCATCCCATCGACCTTCCGCAGATCCATCCTGACAAGGAAG
TGTACCGCCTTTTCGAGGTGAAGCCTGGCGGCAGCTTGGATATTCGTTTC
GTGAGCCTCTTCCGCCCGTCTCCACGGAAGGTGGACGAGAACCTTAGTGT
TATCGTTGCGGGCGTTGCGCTTGTGGAGCTGGGGGGCTACATGCGGGGCA
CAGCTTGTATTTTCCGACAGCCCGCGCAAACATTTGAAGCTTTCGTGAAA
TCACTCGAAACCCCCTTTGCACGCAAACGCATTGTGGGTGGTTTCGTCTT
GGTTCTGGGAGGGACTTTCTTTTGCTATGGATGTCAAGCTGTTCGCTGGG
CACCTTACGGGTCGCCTAATGTCAATGTTGTCCAGATCGGACGGGATTAT
CTAGTCATGGCCGGCTCGAATGTGTGCATCGGATGCTATCACGTTGCCTA
TTCACCCTACGGTTCTGCAATCAGTGTGGGAAATGCCATGGGAGTCTTTG
GTGGCGTGAATATCCGAATTGGAGGCGGAACGATCGGATCCTCCGTGCTA
AAAGGACAGTTTGATGGCCAGTGGTATGCTTCCTAGCGACCCGCAACTAG
GGCAGGCCCCCCGCCGCCGTCGTCGGGTCCTGCTGATTTCTCTTGGTGCA
CTGTGCCTCATCGTGGTCGGTGCTTTAGCCATTGGCTTCGGATTTAAGGG
CAAAGACAACGATAAGAGCATATCAACGCATGGCAATAAGCACGGGCCCG
CAACGGAAGCGGTTTCTTCAATGGCTGACACGAAGAACACGATCGTCCCC
TCCGCACCCGAATCAG back to top
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