rna5351, rna5351 (mRNA) Nannochloropsis gaditana

Overview
Namerna5351
Unique Namerna5351
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length204
Alignment locationCM002465.1:777608..779139 -

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Properties
Property NameValue
Productenoyl- hydratase
Orig transcript idgnl|cribi|Naga_100196g7.3064.mrna
Orig protein idgnl|cribi|Naga_100196g7.3064
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:777608..779139 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100196g7gene5172Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25340.1cds5338Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna5351rna5351-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna5351 ID=rna5351|Name=rna5351|organism=Nannochloropsis gaditana|type=mRNA|length=204bp
ATGGGACGGGACGGATGGAGGGACAATGCCGAGAAATGTAGCATGGGGCT
GTATCAACGCTTGGGTTGGACACAGTGGGAGGAGGGAGAATATTTCGAAT
GCGGTATGGATGCAAGCCTCGGAGGGATTGGAGCCAGTATAGGTGGAATG
TATCATGTGCATAATCAGCTTGTCGATAGTAGCATAGCGCAACCCTGTCC
ATAG
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protein sequence of rna5351

>rna5351-protein ID=rna5351-protein|Name=rna5351|organism=Nannochloropsis gaditana|type=polypeptide|length=298bp
MLARSILCRPAVRYGLTSSIPCLRTKCQMSLMSTAPAGKWEKEYDFILAE
KKGKVALLTLNRPKALNALCNGIIQDLIDATTAIAADDTVGAIVLTGSTK
AFAAGADIKEMKDKSFVQAFSSNMFAEWGHIARVTKPIVAAVNGYALGGG
CELMMMADIVIAGENAKFGQPEITLGVIPGCGGTQRLVRAIGKSKAMELV
LTGGMIDALQAERDGLVSKVVPAEKTVDVALEMATKIASYSLPVAAAAKE
TVNAAFELNLAEGLRFERRIFHSLFALQDQKEGMAAFVEKRKPTFTNT
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mRNA from alignment at CM002465.1:777608..779139-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna5351 ID=rna5351|Name=rna5351|organism=Nannochloropsis gaditana|type=mRNA|length=1532bp|location=Sequence derived from alignment at CM002465.1:777608..779139- (Nannochloropsis gaditana)
GCTCGGCCATCATTTCCAGTCCTGTTCGTCGTATCTTGTTCATACAATTT
CTTTTTCTTTTCACCTTGCACACATCTACCCACAGTATGCTGGCCCGCTC
CATCCTTTGTCGTCCTGCCGTTAGGTATGGTTTGACGAGCTCAATCCCCT
GCCTGCGGACAAAGTGTCAAATGTCGCTGATGTCTACGGCCCCGGCAGGG
AAATGGGAAAAGGAATACGACTTCATACTGGCGGAAAAGAAGGGCAAAGT
TGCCCTTCTGACACTGAACCGGCCCAAGGCCTTGAATGCCCTGTGCAACG
GCATCATCCAAGACCTCATCGATGCCACCACGGCCATCGCGGCTGATGAT
ACTGTCGGTGCAATCGTTCTGACCGGCTCGACGAAAGCTTTCGCTGCAGG
TGCGGACATAAAGGAAATGAAGGACAAGTCATTCGTGCAGGCCTTTAGCT
CGAACATGTTTGCAGAATGGGGTCACATTGCCCGGGTAACCAAGCCTATC
GTGGCGGCTGTGAATGGTTATGCGCTAGGAGGGGGTTGTGAGCTGATGAT
GATGGCAGACATCGTCATCGCCGGAGAAAACGCCAAATTTGGACAACCTG
AGATCACGCTGGGGGTGATTCCTGGGTGCGGAGGGACGCAGCGCCTGGTC
CGGGCGATAGGGAAGAGCAAGGCGATGGAGTTGGTGTTGACAGGCGGAAT
GATAGATGCGCTGCAGGCGGAGAGAGATGGCCTCGTGTCTAAGGTGGTGC
CCGCCGAGAAAACCGTCGACGTGGCCCTGGAAATGGCGACCAAGATCGCC
TCCTATTCCTTGCCTGTGGCGGCGGCCGCCAAGGAGACTGTGAACGCGGC
ATTCGAACTCAATTTGGCGGAGGGTTTGCGGTTCGAGCGGCGGATTTTCC
ACAGCCTCTTCGCCCTCCAGGACCAAAAAGAGGGAATGGCAGCCTTCGTG
GAGAAAAGGAAGCCCACGTTCACGAATACGTAAGCGCCAACGGTGGAAGT
AGGTAGAAAGAGATTGCAAAATCGATGCTAGCGTCAGAAGGGAAATGTGG
AGGGACGGGTGCGACAAGACGTGCGGGAAAAGCACGGAAAAGCAGGGAAA
AGGAGGATACATGCATGCGATACTGGAGGCACAGGCCCCGATGATGTGAG
CACGGTGAGAAAAAACAAAGGGTTCGAGCATGCCGCGGAGGGTCTAGTGT
GAGGAATGTGCTCCTTGACGATGGGGACGGAAGGAATTTTTTTCACAGCC
CACGAGCAGCGAATCCTCTGCCAAGCGCGTGGGAGGGACCTCACGGCAGG
CTGGAAAAATGACAACGACAATGCCCGATTTCTTTGGTCACAGCAAGCGT
TGTCTCACCTATGGACAGGGTTGCGCTATGCTACTATCGACAAGCTGATT
ATGCACATGATACATTCCACCTATACTGGCTCCAATCCCTCCGAGGCTTT
CCCTCTCTGACAGCTATTGCCTCTTAACGCTCCTTCGCCACACCTTGCAT
CCATACCGCATTCGAAATATTCTCCCTCCTCC
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Coding sequence (CDS) from alignment at CM002465.1:777608..779139-

>rna5351 ID=rna5351|Name=rna5351|organism=Nannochloropsis gaditana|type=CDS|length=897bp|location=Sequence derived from alignment at CM002465.1:777608..779139- (Nannochloropsis gaditana)
ATGCTGGCCCGCTCCATCCTTTGTCGTCCTGCCGTTAGGTATGGTTTGAC
GAGCTCAATCCCCTGCCTGCGGACAAAGTGTCAAATGTCGCTGATGTCTA
CGGCCCCGGCAGGGAAATGGGAAAAGGAATACGACTTCATACTGGCGGAA
AAGAAGGGCAAAGTTGCCCTTCTGACACTGAACCGGCCCAAGGCCTTGAA
TGCCCTGTGCAACGGCATCATCCAAGACCTCATCGATGCCACCACGGCCA
TCGCGGCTGATGATACTGTCGGTGCAATCGTTCTGACCGGCTCGACGAAA
GCTTTCGCTGCAGGTGCGGACATAAAGGAAATGAAGGACAAGTCATTCGT
GCAGGCCTTTAGCTCGAACATGTTTGCAGAATGGGGTCACATTGCCCGGG
TAACCAAGCCTATCGTGGCGGCTGTGAATGGTTATGCGCTAGGAGGGGGT
TGTGAGCTGATGATGATGGCAGACATCGTCATCGCCGGAGAAAACGCCAA
ATTTGGACAACCTGAGATCACGCTGGGGGTGATTCCTGGGTGCGGAGGGA
CGCAGCGCCTGGTCCGGGCGATAGGGAAGAGCAAGGCGATGGAGTTGGTG
TTGACAGGCGGAATGATAGATGCGCTGCAGGCGGAGAGAGATGGCCTCGT
GTCTAAGGTGGTGCCCGCCGAGAAAACCGTCGACGTGGCCCTGGAAATGG
CGACCAAGATCGCCTCCTATTCCTTGCCTGTGGCGGCGGCCGCCAAGGAG
ACTGTGAACGCGGCATTCGAACTCAATTTGGCGGAGGGTTTGCGGTTCGA
GCGGCGGATTTTCCACAGCCTCTTCGCCCTCCAGGACCAAAAAGAGGGAA
TGGCAGCCTTCGTGGAGAAAAGGAAGCCCACGTTCACGAATACGTAA
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Synonyms
Publications