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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100005g131.6752.mrna |
| Orig protein id | gnl|cribi|Naga_100005g131.6752 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:738692..740376 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5332 ID=rna5332|Name=rna5332|organism=Nannochloropsis gaditana|type=mRNA|length=2276bp
TGAGGTGCACCGTCACACTCGGACAAACATGCGTACGACAAGGATCTTAC
CGCATCGTGCTCGCGGACAGTGAGGCCTAACTCGCTTCTGGGAGGCACCT
TACGTATGCCGCCCTCCTCGGTCGGTATCACCCGGAGGGGTCAAGGCAAC
GTCCTATTGCCGTACCTTCTCGTCTCACGTTTGTCTTCGCTATCCTTTTC
ACCCAGGAATCTGACGACATAAGGCGTGCACGTGTGCCTGCTCGGAAGCG
AAAGCGGCTGGCAGGTTGCATAAAGCTTTGCTGCGTCCGTCAAAACGACG
CGCTCTCTTTCTCATCACAAACCGGCGCCCGCTACAATAGAGATGTCTTC
CTCACCGCCTGTCCATTACGGTGCCACCGCTTCCTTGCCGTATTCAGATT
ATAATCATGAGGACGATTATCTGAGCGTGGATGCGGAGGAAGGGCGTCGG
CGTCGGGACGAGGAGGAAACTACTCCCACAGCCCCGTCTTCCTCTACCTC
AAGTCTCATGCGACAGTACCAGACGTCTGGCTACCATTCCGATAGCGCGA
TCCCCACGCAATCGCACATGACTCCTAACCGTCGACGGAGGACGAGTTCG
CGGGAGATGCTGGACCCCGCGGCCGAGCCCTTGATAGGGACGGACATCGA
CGAGAGCGATCGCGAGAGGGACGGCCGCCATCACCACCTGCATTCGCCCT
CGATGAACCACGGGAGGGAAAGCTACGAGGACGGCAATGGGTTCGCCGTA
CAATCAATGCTGGACTTTGACCAATTCAGGTCCCCGTTGGAAGAGTGGGT
TCAGCCGCGGAAGCCTCGCTGGAACCGGAAAGTGACGCGAAAAAAGACGA
AAAAGCCCACGATCGCCGTGCGAAAAGGCCGGCTGGCCGTGTACTGTATT
GCCTCAGAGCTGCAGACGGATCAAATCCAGCGCTACTTGTTGCAGCGCAA
GAAGGAGATGGTTCCTGTCGACAAGGGAGGACACAAGGGGAAGGGAGCAG
GAGGAGACGGAGGAGGCGGAGGGTATTACGGCACGAATGGAGGCAAAGCC
GGAAGCCAACACTCGTATTTCGCACCGCCTGCTCCGCCCACGCTCTCAAC
CACAAACTCGAGCAGTTTGCTCTTACCAGTGCCCAAGAAGAAGGAGGGCG
GCAGGGGCAGCCACATCGCCGCGCGCTGCAAGAGCTTCCTGCGCGCAACG
GCCAATGCAGCGGTGAGTGGGGTCAAAGCAGCCCCTCCGTCCCAGTCGGC
AAAGGTGGATACATCGGATCTAGTCGGTTTGAATTGGCGGGACAAGAATT
TCATGGGCGTCATCTACACCACCGATGATGACGGGAAGTGCGACCCGCTG
GAGGTGAAGCACATCTTCTGTTTTCCCTACGGCTGCACTGTGTTTTGGGG
CTGCACGAAGGAGGAGGAGGAGCGTTTCATCAGCATGCTGACGCCCTTCG
CGGTGGAGCTGGTCTCGGATATGGAGCGGGAGGAGAGCTACGACGATTTC
GCCTACTTCTACGGGAGCTCGCCGCAAATCCTCCACTACGAGATCACGCT
CACAAGCAACGACCCGGAGGAAAAGCTGGCCCTCTCTTTTTCGCTGGCCC
AGTCAGCAAAGCTCTTTGTCTTCGAGGACCGCGTGGATGGGACCATCACC
AGCACCAAGCACATCCCCATCCACCTGGCGGAGTTCGGCAAGACCAACGT
GAGTCGTAAGGAGATTAGCAAGCTCACGGGGAAGGTCTTCCTGGAACGGA
ACGAGATCAACCTGCACTCGGACATCCTGGACACGCCGGAATGGTTTTGG
GAGGCCGACCTGTGGGAGCCCCGATACGTGGGCCTGTGCAAGTACCTGGA
CCTGCCCAACCGCGTCAATATCCTGAACAAGCGGCTTGACATCTTGCGGG
AGCTTCTGAACGTGCTCGAGACGCAGTTAGACAACTCTCATTCCACGAAG
CTCGAATTGATCGTGATTGCGCTGATTATTGTGGAGGTGGTTCTCCAGGT
GCTGGAGATCGCCCTCAATGACCTCTTGCATTTGAATAGGAATGCGTTCT
AGGCGAAGAAACAGACGACGAGGGGACAAAATAAGGAGGATTTGTGTCTT
GCCGGGGAAAGCGCTAGGGAAGGAGGGAATGCCTGCTTCTGTGGGCCGTC
TCTCTTCCCATGAAATGCGTGGTGACATTTTGCGGCAACAGAATATGACT
GGACGATGAAAACCATGGGAAAGACAGCAAGAGTGCACGTCAAAGCAGAA
GATATGCGCCGGAGGGATTTTCTTTG back to topprotein sequence of rna5332 >rna5332-protein ID=rna5332-protein|Name=rna5332|organism=Nannochloropsis gaditana|type=polypeptide|length=442bp
MAAEELQSLGHLEEDILGSDFALQRRRERALRILPLCVEGLEAVLRFLCG
AGNGPECVIEGNESSARSESRARCDGEWWMLPGENLLDMRASLHDALGAF
LRLLQDGAGEWRQTRVRTAGGPDRVWEELGEELEAVFREVVAFMSAMLSE
DEGCLSAEETLDVLPFFKAVVGEDPRWMRPWVSRAMLLGIENGDDDAEAS
IRAIDRLVDECQIHHWFVKQLKRPTRDASEQGQHVDLLFIFHEIIVRGGQ
RVICDDVACLLLFHPSISSLVPDLVLDNYHPSSSCLAFTSSSSVRLGLHR
VWFVLSILWERAQFRSGSEGKRGIAEDVEYLELQGLLDGLVPPGSETRLS
WLTGIGRVLVEGGKALISAPRCHAHAAEGPKLTEAERDEISDAWKQSMRI
FSYLPRSVQQEVLQRLRLYYNAEDLQALEDEWVLLDAAAAVL back to topmRNA from alignment at CM002465.1:738692..740376+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5332 ID=rna5332|Name=rna5332|organism=Nannochloropsis gaditana|type=mRNA|length=1685bp|location=Sequence derived from alignment at CM002465.1:738692..740376+ (Nannochloropsis gaditana)
gtaggagaggCTGAagtagggggaggggagtgtgCTGCTGGGCATGGGAC
GGGCAGGCGCCATGGCAAGAGCGTAGTCTTCCTCGTGCACGCCTTGTCGG
CGGAAGCGCGGatggccgcggaggagctCCAGTCTCTGGGGcacttggag
gaggacatctTGGGCAGCGATTTTGCGCTCCAACGCCGTCGGGAACGGGC
TTTACGAATCCTTCCCTTGTGtgtggaggggttggaggctGTGCTGCGTT
TTTTGTGCGGGGCAGGCAATGGTCCGGAGTGCGTAATAGAGGGGAACGAG
TCATCCGCAAGGTCCGAGTCGAGGGCTAGATGCGATGGAGAGTGGTGGAT
GCTCCCGGGGGAGAACTTGTTGGATATGCGGGCCTCTTTGCACGACGCGT
TGGGGGCTTTCCTGAGACTCCTGCAggatggggcgggggagtggaggcag
ACCAGGGTGCGGACAGCGGGTGGACCGGATCGGGTATGGGAGGAACTGGG
CGAGGAATTGGAGGCGGTCTTCCGGGAGGTGGTTGCCTTCATGAGTGCGA
TGCTCTCTGAGGACGAGGGCTGTCTGAGTGCGGAGGAAACGCTGGACGTG
TTGCCCTTCTTCAAGGCCGTGGTCGGGGAGGACCCTCGATGGATGCGACC
ATGGGTGTCACGGGCGATGTTGTTAGGGATAGAGAACGGGGACGACGACG
CCGAGGCGAGCATTCGGGCGATTGACCGGCTCGTAGATGAGTGTCAGATC
CATCACTGGTTCGTCAAGCAGCTAAAGCGCCCTACCCGCGACGCATCGGA
GCAAGGCCAGCATGTCGAcctccttttcatcttcCACGAGATCATTGTCC
GCGGTGGGCAACGAGTTATTTGCGACGATGTcgcctgccttctcctcttt
cacccaTCCATTTCCAGCCTTGTGCCTGACCTGGTCCTGGATAATTacca
tccttcttcctcttgtctcgcgttcacgtcctcgtcctccgtgcGCCTTG
GGCTTCACCGGGTGTGGTTTGTCCTGTCGATtttgtgggagagggcgcag
tTTCGCTCTGGCAgcgaaggaaagagggggattGCCGAGGACGTGGAGTA
TCTGGAGCTGCAGGGTCTGTTGGATGGACTTGTGCCTCCTGGAAGCGAGA
CACGTCTCTCATGGTTGACGGGCATAGGAAGAGTGCTCGTAGAGGGCGGT
AAAGCATTGATATCTGCACCAAGGTGCCATGCTCATGCGGCTGAAGGCCC
AAAATTGACGGAAGCAGAGCGGGACGAGATCTCGGATGCCTGGAAGCAAA
GCATGCGCATTTTTTCATATCTACCGCGTAGCGTGCAGCAGGAAGTCTTG
CAAAGACTAAGACTGTATTACAATGCCGAAGATCTGCAAGCCCTGGAAGA
TGAATGGGTCTTGTTGGAtgcagcagcggcagtgTTGTAGTGACCAAGAG
GAGGGGTAATTTGAACACATGAAACAAAAATGAAAAGAATTGTACAGTTC
TGGTTTTAGAAACCTCTTTACCCAAAGTCACAATGTGTAGAAGTTCTAGC
AATGAAAGCATGATAGATATCGACAATGAATTCGTTTCAAACCAGATACA
TGGCCACTGCGCTTCTGACAAACAAATGTTATGATTCTAGCGTGGAATTT
AATTTTCAATGTTCATGTTAAAATGTTCAAAAATC back to topCoding sequence (CDS) from alignment at CM002465.1:738692..740376+ >rna5332 ID=rna5332|Name=rna5332|organism=Nannochloropsis gaditana|type=CDS|length=1329bp|location=Sequence derived from alignment at CM002465.1:738692..740376+ (Nannochloropsis gaditana)
atggccgcggaggagctCCAGTCTCTGGGGcacttggaggaggacatctT
GGGCAGCGATTTTGCGCTCCAACGCCGTCGGGAACGGGCTTTACGAATCC
TTCCCTTGTGtgtggaggggttggaggctGTGCTGCGTTTTTTGTGCGGG
GCAGGCAATGGTCCGGAGTGCGTAATAGAGGGGAACGAGTCATCCGCAAG
GTCCGAGTCGAGGGCTAGATGCGATGGAGAGTGGTGGATGCTCCCGGGGG
AGAACTTGTTGGATATGCGGGCCTCTTTGCACGACGCGTTGGGGGCTTTC
CTGAGACTCCTGCAggatggggcgggggagtggaggcagACCAGGGTGCG
GACAGCGGGTGGACCGGATCGGGTATGGGAGGAACTGGGCGAGGAATTGG
AGGCGGTCTTCCGGGAGGTGGTTGCCTTCATGAGTGCGATGCTCTCTGAG
GACGAGGGCTGTCTGAGTGCGGAGGAAACGCTGGACGTGTTGCCCTTCTT
CAAGGCCGTGGTCGGGGAGGACCCTCGATGGATGCGACCATGGGTGTCAC
GGGCGATGTTGTTAGGGATAGAGAACGGGGACGACGACGCCGAGGCGAGC
ATTCGGGCGATTGACCGGCTCGTAGATGAGTGTCAGATCCATCACTGGTT
CGTCAAGCAGCTAAAGCGCCCTACCCGCGACGCATCGGAGCAAGGCCAGC
ATGTCGAcctccttttcatcttcCACGAGATCATTGTCCGCGGTGGGCAA
CGAGTTATTTGCGACGATGTcgcctgccttctcctctttcacccaTCCAT
TTCCAGCCTTGTGCCTGACCTGGTCCTGGATAATTaccatccttcttcct
cttgtctcgcgttcacgtcctcgtcctccgtgcGCCTTGGGCTTCACCGG
GTGTGGTTTGTCCTGTCGATtttgtgggagagggcgcagtTTCGCTCTGG
CAgcgaaggaaagagggggattGCCGAGGACGTGGAGTATCTGGAGCTGC
AGGGTCTGTTGGATGGACTTGTGCCTCCTGGAAGCGAGACACGTCTCTCA
TGGTTGACGGGCATAGGAAGAGTGCTCGTAGAGGGCGGTAAAGCATTGAT
ATCTGCACCAAGGTGCCATGCTCATGCGGCTGAAGGCCCAAAATTGACGG
AAGCAGAGCGGGACGAGATCTCGGATGCCTGGAAGCAAAGCATGCGCATT
TTTTCATATCTACCGCGTAGCGTGCAGCAGGAAGTCTTGCAAAGACTAAG
ACTGTATTACAATGCCGAAGATCTGCAAGCCCTGGAAGATGAATGGGTCT
TGTTGGAtgcagcagcggcagtgTTGTAG back to top
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