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Properties
| Property Name | Value |
|---|
| Product | topoisomerase 6 subunit b |
| Orig transcript id | gnl|cribi|Naga_100005g117.6642.mrna |
| Orig protein id | gnl|cribi|Naga_100005g117.6642 |
| Gene | TOP6B |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:704058..707346 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5320 ID=rna5320|Name=rna5320|organism=Nannochloropsis gaditana|type=mRNA|length=1335bp
ATGATAGCGGATTCCACATCAGTGAAAGGTTCACCTGACAATGAACTTGA
TGCGCGGATTGTTGAGGTCTTGCGCATCGCCTTCGGGCTCCAGACATTCC
GTCAACCGCAAAAGGATGTCATCAAGCATGTCCTTCAAGGAGGATCTGGC
CTAGTGCTTCTTCCCACAGGGGGAGGGAAGAGCCTATGTTACCAACTGCC
TGCGCTCCTCCTGGACGGGGTCACTGTCGTTGTGTCTCCTCTGATCGCGC
TCATGAACGACCAGGTTACCGCCCTGAGAAAAAAGGGTATAGACGCCCGC
TACTGCAGCTCCTCCCTGGATCCCTATCTCAACAAAGACATCCTCGACGA
CCTTCGTCTTCGACCGGAGCCCCGCGTCAAGCTCCTGTACGTGACCCCAG
AGCGCCTGACCACCCCCTCCTTCCTTCCCGTCCTCCAACAGCTCCACGCC
CGCAAACTCCTCGCTGCTCTCATCGTCGACGAGGCACACTGCATCTCTCA
GTGGGGCCACGATTTTCGGCCGTCGTACAGGCGCTTGGAAGAAGTGCGCG
CCCTCTTCCCCTCCCTGCCCTGCTTGGGGCTCACGGCCACCGCCACCCCC
AGGGTCCAACGGGACATCGTCTCCACGCTCCGCCTCCCTCCCTCGCACGT
CTTCCGCAAATCCTTCGACCGCCCCTCCCTCTTTTACCGGGTCGAGTACA
AGCCCCTCCTTCCCGACGCTCAGGAGGTGCTGGCCACTGCCATCAAGCAA
GCCATCGGGTGGCGCGAGAGCGGCCAAGGCGGGGTCCCCGGGGCGGGGGG
CTGGACAGGCAGTGCCAAGAGAGAGGCCACCGCCTCCGCGGCTGCGACTG
AGTCGGGGAGTGCCACGAACAGGCTAGGGCAGAACTGTGCCGGGGGAAGC
GCCATCGTTTACTGCTGGAAGCGTGAGACATGCGAAGAGCTGGCCCGCGC
GCTGGAAGGGCGGGGCCTCTCTGCGCTTGCCTACCACGGGAAGCTGCCGG
ACGCGCGGCGGCGGCACGTGCAAGCCATGTTCGTGGAGGGGGGGGTACAG
GTGGTTGCGGCCACGCTTGCCTTCGGGATGGGCATCGACAAAGCCGATGT
GCGGGTGGTGGCCCATTGGAACATCCCTCCCTCCTTGGAGGCCTTCTACC
AAGAGAGCGGGCGGGCTGGGCGGGACGGGGGACCTGCCCTCTCTCTCCTC
TTCTACTGCCCTCGGGACGCGGAGGGTCGGTTCCACATGCTGCACAAGGA
GTTGGAAGGCCACGGGGAGGCAGGGAGAGAGAAGCAGCAGGCAGTGGAAC
GAAAGAAGGAGCAACTGGACAGCCGAGGGGGCTGA back to topprotein sequence of rna5320 >rna5320-protein ID=rna5320-protein|Name=rna5320|organism=Nannochloropsis gaditana|type=polypeptide|length=742bp
MDPSVVVSNSIRSSMGSTAWSVSSWLSSFNNGGRGHDPAVSPSRTPPRGV
GKGRAPPCRPHHSHHLPSKCCERGGCGKRSNGCKYSSPSRPRPGPKLLCR
YGMGCTHVSDPVHAEQFWHPPVPGEPVCMTLEDRNGGYAAEAKGGENLFS
ESSFAVTRSYPCHECGLCFRDLSVLRLHLQRKTAWSNQSLVGCRVSCLVD
HREWQEGLVVEYREAAGKHRIVFEHVGESRWLSMLRTAFFIIRRPAAPPP
CRSQRSSSSSLAPFDPFLPHSAGSVPESKDVDARERQKDRSAPSLALAQS
ERVGHWTYVEEISLGYARAQAIMHRAYGNRIQETGHKTRGHLCVTETDRV
LAQDAQSSLLYGELLPRGINKALGDMRLRGSEAEVVFELGMGIGKVAMQV
FLQLTGQTVTEIETEGAWGEGLEDGDPRRGGRLRRVYGVELSSARFFIAE
AAAHRLCREYPRDFGIQAWERGQRIVVEKMGSGAVLEMEVGNLLAVRGLD
RADIVLLETDLGAGVHPELCALLRSMKSGARAFTYLDLRSIWGAEGGVEG
EVEAGTFPFRQLEINRSVSDRYATSWSVNRGHHFYLWMKVLESGSDVLMV
PEGHPEPSEWVPDAWAGAGRERGRGRGRTVGPRGVTIDGQGQHGRVMPSS
RSHSQDRRHHASDTVSQDGPLSHSPTFPRNRPLASSPPAFSPCRFPAQEM
PRKEAPLRRNQGKGGGGSAHKSVFVTWGKAVRRLVGRGGGGQ back to topmRNA from alignment at CM002465.1:704058..707346- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5320 ID=rna5320|Name=rna5320|organism=Nannochloropsis gaditana|type=mRNA|length=3289bp|location=Sequence derived from alignment at CM002465.1:704058..707346- (Nannochloropsis gaditana)
ATGGATGTATGATTCTGAATTGATGACGGAAAAGAAATGTGCAATCTACC
AGCAAACCAGCAACACTTTGAGAGTGACGAAGATGAGGAGTGCCAAGCCT
TATACATCTATACGAAGTTACAACGATACAATCTTAGCATTATGATACTG
AAGGACGGGCTAAAACGTCTACCAGCATAGTGGATGTGCGCAAGCGACCG
GACGCCGCGGCGCAACTCGTTACGTTGAAGCAATTTGTCGTATCCAAGCG
ACCCGGAGGTTGGCTTTCCTTCCCGGTGCGGCACAGCATTTCTCACTTTC
GTGTGGACGTGTGTCCCTGAAGTGAGTGTCTAGGCGCAAGACATGTGATG
ACCTGACTGAAACATGTGGGAACCCAGTATTTGAGTCGCTACGCATGCTG
AGGCTATTTTTTGTCAATCCTCAAACATATCAAGAAGGGGCCCACACGGA
GGAGGAGAACGACGACGCTGCTGAACGAAATTTCGACCTCATGATCCCGA
GACACAGCCAAGCGTAGTCGTCTCAAACAGCATTCGATCATCAATGGGGA
GTACAGCCTGGAGCGTCTCCTCCTGGTTGTCCTCCTTTAATAACGGTGGT
AGGGGCCATGACCCGGCTGTTTCACCTTCCAGGACGCCTCCTCGAGGTGT
GGGCAAGGGCCGGGCCCCTCCGTGTCGTCCGCATCACTCGCACCATTTGC
CGTCAAAGTGCTGTGAAAGAGGTGGCTGTGGAAAGCGCAGCAACGGATGT
AAATATTCTAGCCCAAGCAGGCCGCGGCCAGGCCCCAAATTGCTGTGTCG
TTACGGTATGGGCTGTACACACGTGTCGGACCCTGTCCACGCCGAGCAAT
TTTGGCACCCGCCGGTTCCAGGTGAGCCAGTATGTATGACTTTGGAGGAC
AGGAATGGAGGCTACGCTGCAGAGGCCAAAGGTGGAGAGAACCTCTTCAG
TGAGTCCTCCTTCGCTGTCACACGTTCATATCCCTGCCATGAATGTGGCC
TTTGCTTCCGGGACCTTTCTGTTTTGCGGCTGCACTTGCAACGCAAAACG
GCCTGGTCCAACCAATCTCTAGTCGGTTGTCGCGTCAGCTGTTTGGTGGA
TCATCGGGAATGGCAGGAGGGCCTGGTGGTGGAGTATCGGGAAGCCGCGG
GGAAGCACAGGATTGTCTTCGAGCACGTGGGAGAGTCGCGGTGGCTGTCG
ATGCTACGCACCGCCTTTTTTATCATCCGTCGCCCCGCAGCACCACCCCC
CTGTCGCTCTCAAAGATCTTCGTCCTCTTCCCTCGCCCCCTTCGACCCTT
TCCTCCCTCACTCGGCCGGGAGCGTGCCGGAGAGCAAGGACGTCGATGCC
CGGGAGAGACAAAAAGACCGAAGCGCCCCGAGCCTGGCTCTCGCCCAATC
GGAACGTGTCGGTCATTGGACGTACGTCGAAGAAATTTCTTTGGGCTACG
CGAGGGCCCAAGCTATCATGCACCGTGCCTACGGCAATCGCATTCAGGAA
ACGGGGCACAAAACGCGTGGGCACCTGTGCGTGACGGAGACGGACCGAGT
CCTGGCGCAGGACGCGCAATCCAGCTTGCTCTACGGGGAGCTACTGCCTC
GCGGAATCAACAAGGCGCTGGGGGACATGCGTTTGCGGGGCTCGGAGGCG
GAAGTGGTTTTCGAGCTGGGGATGGGCATAGGGAAGGTGGCGATGCAGGT
CTTTTTGCAGTTAACGGGCCAAACCGTGACGGAGATAGAGACAGAGGGGG
CGTGGGGTGAGGGGCTTGAGGATGGTGACCCAAGGCGAGGGGGGCGTTTG
CGGCGGGTGTACGGTGTGGAGCTCTCCTCTGCCCGGTTTTTCATCGCGGA
GGCGGCCGCCCATCGCCTGTGCCGGGAGTACCCGCGGGACTTCGGCATTC
AGGCATGGGAGAGGGGCCAGCGCATCGTGGTGGAGAAGATGGGCTCGGGC
GCGGTCTTGGAGATGGAGGTGGGTAACCTCTTGGCCGTGCGGGGCCTGGA
CCGCGCCGACATCGTCCTCCTCGAGACCGACCTGGGCGCCGGCGTGCATC
CGGAGCTCTGCGCTTTGCTTCGGAGCATGAAGAGCGGGGCGCGGGCCTTT
ACCTATCTGGACCTCCGGAGTATTTGGGGGGCAGAGGGAGGGGTAGAGGG
GGAGGTGGAGGCGGGGACCTTCCCCTTCCGGCAGCTGGAGATCAACCGGT
CCGTGTCGGACAGGTATGCCACGTCTTGGAGCGTGAATCGGGGGCACCAC
TTCTACCTGTGGATGAAGGTGCTGGAGAGCGGGAGCGACGTCCTCATGGT
CCCAGAGGGCCATCCCGAGCCGAGCGAGTGGGTGCCGGACGCGTGGGCGG
GGGCCGGGCGGGAGAGAGGGCGAGGGCGGGGGCGGACGGTGGGACCCCGT
GGCGTGACCATTGACGGGCAAGGCCAACACGGTCGAGTAATGCCATCCTC
CCGCTCTCACAGCCAAGACAGGCGCCACCATGCGTCCGACACTGTCTCAC
AAGATGGACCCCTCAGCCACTCCCCGACCTTCCCCCGAAACCGTCCTCTG
GCCTCCTCCCCTCCAGCTTTCTCGCCTTGCCGATTTCCCGCCCAGGAAAT
GCCAAGGAAAGAAGCGCCTTTAAGAAGAAATCAAGGGAAGGGCGGTGGAG
GTTCTGCTCACAAGTCTGTCTTTGTCACATGGGGGAAGGCGGTGCGACGC
TTGGTAGGGCGGGGGGGGGGAGGGCAATGACGACGAGCTGAGAAATGGAA
GGGACTATTCAGTCCTGTCTTGAGCAGCGACCAATGAGTGACCAAGCACG
ATTTCCATCTTTGGTGTGTGAGGGTATTCTCACGCGTATGTATCCGTTGC
GTGCCTACGTCTCGTAGAGATATTTATTCTTCCTTGTCGCGCGAGCGGTG
GGGGAAGACAGTGCAGTAGAGAAGTGAGGGATGGCTGGTGTAGAGTAGTG
AGTGAGTGCGACAGGGGGAACAGAGGGGAAGCGTCGAGGGGTCAACAGAG
CTCACAAGGCTCAGCGATAAATTGATAGCCTCAATTCCCACTCGTCCGTG
GCAAATCCTGGTGGTTCAAGAAAGCAGAAAGCATTCGTACATAGACAGTC
TCAGTACGGAAGACAGACGACGAGGAAATGGAGGGCGTCTGTCGAGGCTA
AATAAACCATGTAAGCAAAACAGAAAGGTACAGCACACAAGAAAGAAAAG
CCGGTGGCTAAATGGGCGTCCCATCTCGGCGATGTGCGACACGTTTCTTA
CTTACTCCACGGGAGCGTCCAATCCCTGTAGGAATTGCC back to topCoding sequence (CDS) from alignment at CM002465.1:704058..707346- >rna5320 ID=rna5320|Name=rna5320|organism=Nannochloropsis gaditana|type=CDS|length=4458bp|location=Sequence derived from alignment at CM002465.1:704058..707346- (Nannochloropsis gaditana)
CCAAGCGTAGTCGTCTCAAACAGCATTCGATCATCAATGGGGAGTACAGC
CTGGAGCGTCTCCTCCTGGTTGTCCTCCTTTAATAACGGTGGTAGGGGCC
ATGACCCGGCTGTTTCACCTTCCAGGACGCCTCCTCGAGGTGTGGGCAAG
GGCCGGGCCCCTCCGTGTCGTCCGCATCACTCGCACCATTTGCCGTCAAA
GTGCTGTGAAAGAGGTGGCTGTGGAAAGCGCAGCAACGGATGTAAATATT
CTAGCCCAAGCAGGCCGCGGCCAGGCCCCAAATTGCTGTGTCGTTACGGT
ATGGGCTGTACACACGTGTCGGACCCTGTCCACGCCGAGCAATTTTGGCA
CCCGCCGGTTCCAGGTGAGCCAGTATGTATGACTTTGGAGGACAGGAATG
GAGGCTACGCTGCAGAGGCCAAAGGTGGAGAGAACCTCTTCAGTGAGTCC
TCCTTCGCTGTCACACGTTCATATCCCTGCCATGAATGTGGCCTTTGCTT
CCGGGACCTTTCTGTTTTGCGGCTGCACTTGCAACGCAAAACGGCCTGGT
CCAACCAATCTCTAGTCGGTTGTCGCGTCAGCTGTTTGGTGGATCATCGG
GAATGGCAGGAGGGCCTGGTGGTGGAGTATCGGGAAGCCGCGGGGAAGCA
CAGGATTGTCTTCGAGCACGTGGGAGAGTCGCGGTGGCTGTCGATGCTAC
GCACCGCCTTTTTTATCATCCGTCGCCCCGCAGCACCACCCCCCTGTCGC
TCTCAAAGATCTTCGTCCTCTTCCCTCGCCCCCTTCGACCCTTTCCTCCC
TCACTCGGCCGGGAGCGTGCCGGAGAGCAAGGACGTCGATGCCCGGGAGA
GACAAAAAGACCGAAGCGCCCCGAGCCTGGCTCTCGCCCAATCGGAACGT
GTCGGTCATTGGACGTACGTCGAAGAAATTTCTTTGGGCTACGCGAGGGC
CCAAGCTATCATGCACCGTGCCTACGGCAATCGCATTCAGGAAACGGGGC
ACAAAACGCGTGGGCACCTGTGCGTGACGGAGACGGACCGAGTCCTGGCG
CAGGACGCGCAATCCAGCTTGCTCTACGGGGAGCTACTGCCTCGCGGAAT
CAACAAGGCGCTGGGGGACATGCGTTTGCGGGGCTCGGAGGCGGAAGTGG
TTTTCGAGCTGGGGATGGGCATAGGGAAGGTGGCGATGCAGGTCTTTTTG
CAGTTAACGGGCCAAACCGTGACGGAGATAGAGACAGAGGGGGCGTGGGG
TGAGGGGCTTGAGGATGGTGACCCAAGGCGAGGGGGGCGTTTGCGGCGGG
TGTACGGTGTGGAGCTCTCCTCTGCCCGGTTTTTCATCGCGGAGGCGGCC
GCCCATCGCCTGTGCCGGGAGTACCCGCGGGACTTCGGCATTCAGGCATG
GGAGAGGGGCCAGCGCATCGTGGTGGAGAAGATGGGCTCGGGCGCGGTCT
TGGAGATGGAGGTGGGTAACCTCTTGGCCGTGCGGGGCCTGGACCGCGCC
GACATCGTCCTCCTCGAGACCGACCTGGGCGCCGGCGTGCATCCGGAGCT
CTGCGCTTTGCTTCGGAGCATGAAGAGCGGGGCGCGGGCCTTTACCTATC
TGGACCTCCGGAGTATTTGGGGGGCAGAGGGAGGGGTAGAGGGGGAGGTG
GAGGCGGGGACCTTCCCCTTCCGGCAGCTGGAGATCAACCGGTCCGTGTC
GGACAGGTATGCCACGTCTTGGAGCGTGAATCGGGGGCACCACTTCTACC
TGTGGATGAAGGTGCTGGAGAGCGGGAGCGACGTCCTCATGGTCCCAGAG
GGCCATCCCGAGCCGAGCGAGTGGGTGCCGGACGCGTGGGCGGGGGCCGG
GCGGGAGAGAGGGCGAGGGCGGGGGCGGACGGTGGGACCCCGTGGCGTGA
CCATTGACGGGCAAGGCCAACACGGTCGAGTAATGCCATCCTCCCGCTCT
CACAGCCAAGACAGGCGCCACCATGCGTCCGACACTGTCTCACAAGATGG
ACCCCTCAGCCACTCCCCGACCTTCCCCCGAAACCGTCCTCTGGCCTCCT
CCCCTCCAGCTTTCTCGCCTTGCCGATTTCCCGCCCAGGAAATGCCAAGG
AAAGAAGCGCCTTTAAGAAGAAATCAAGGGAAGGGCGGTGGAGGTTCTGC
TCACAAGTCTGTCTTTGTCACATGGGGGAAGGCGGTGCGACGCTTGGTAG
GGCGGGGGGGGGGAGGGCAATGAATGGATCCAAGCGTAGTCGTCTCAAAC
AGCATTCGATCATCAATGGGGAGTACAGCCTGGAGCGTCTCCTCCTGGTT
GTCCTCCTTTAATAACGGTGGTAGGGGCCATGACCCGGCTGTTTCACCTT
CCAGGACGCCTCCTCGAGGTGTGGGCAAGGGCCGGGCCCCTCCGTGTCGT
CCGCATCACTCGCACCATTTGCCGTCAAAGTGCTGTGAAAGAGGTGGCTG
TGGAAAGCGCAGCAACGGATGTAAATATTCTAGCCCAAGCAGGCCGCGGC
CAGGCCCCAAATTGCTGTGTCGTTACGGTATGGGCTGTACACACGTGTCG
GACCCTGTCCACGCCGAGCAATTTTGGCACCCGCCGGTTCCAGGTGAGCC
AGTATGTATGACTTTGGAGGACAGGAATGGAGGCTACGCTGCAGAGGCCA
AAGGTGGAGAGAACCTCTTCAGTGAGTCCTCCTTCGCTGTCACACGTTCA
TATCCCTGCCATGAATGTGGCCTTTGCTTCCGGGACCTTTCTGTTTTGCG
GCTGCACTTGCAACGCAAAACGGCCTGGTCCAACCAATCTCTAGTCGGTT
GTCGCGTCAGCTGTTTGGTGGATCATCGGGAATGGCAGGAGGGCCTGGTG
GTGGAGTATCGGGAAGCCGCGGGGAAGCACAGGATTGTCTTCGAGCACGT
GGGAGAGTCGCGGTGGCTGTCGATGCTACGCACCGCCTTTTTTATCATCC
GTCGCCCCGCAGCACCACCCCCCTGTCGCTCTCAAAGATCTTCGTCCTCT
TCCCTCGCCCCCTTCGACCCTTTCCTCCCTCACTCGGCCGGGAGCGTGCC
GGAGAGCAAGGACGTCGATGCCCGGGAGAGACAAAAAGACCGAAGCGCCC
CGAGCCTGGCTCTCGCCCAATCGGAACGTGTCGGTCATTGGACGTACGTC
GAAGAAATTTCTTTGGGCTACGCGAGGGCCCAAGCTATCATGCACCGTGC
CTACGGCAATCGCATTCAGGAAACGGGGCACAAAACGCGTGGGCACCTGT
GCGTGACGGAGACGGACCGAGTCCTGGCGCAGGACGCGCAATCCAGCTTG
CTCTACGGGGAGCTACTGCCTCGCGGAATCAACAAGGCGCTGGGGGACAT
GCGTTTGCGGGGCTCGGAGGCGGAAGTGGTTTTCGAGCTGGGGATGGGCA
TAGGGAAGGTGGCGATGCAGGTCTTTTTGCAGTTAACGGGCCAAACCGTG
ACGGAGATAGAGACAGAGGGGGCGTGGGGTGAGGGGCTTGAGGATGGTGA
CCCAAGGCGAGGGGGGCGTTTGCGGCGGGTGTACGGTGTGGAGCTCTCCT
CTGCCCGGTTTTTCATCGCGGAGGCGGCCGCCCATCGCCTGTGCCGGGAG
TACCCGCGGGACTTCGGCATTCAGGCATGGGAGAGGGGCCAGCGCATCGT
GGTGGAGAAGATGGGCTCGGGCGCGGTCTTGGAGATGGAGGTGGGTAACC
TCTTGGCCGTGCGGGGCCTGGACCGCGCCGACATCGTCCTCCTCGAGACC
GACCTGGGCGCCGGCGTGCATCCGGAGCTCTGCGCTTTGCTTCGGAGCAT
GAAGAGCGGGGCGCGGGCCTTTACCTATCTGGACCTCCGGAGTATTTGGG
GGGCAGAGGGAGGGGTAGAGGGGGAGGTGGAGGCGGGGACCTTCCCCTTC
CGGCAGCTGGAGATCAACCGGTCCGTGTCGGACAGGTATGCCACGTCTTG
GAGCGTGAATCGGGGGCACCACTTCTACCTGTGGATGAAGGTGCTGGAGA
GCGGGAGCGACGTCCTCATGGTCCCAGAGGGCCATCCCGAGCCGAGCGAG
TGGGTGCCGGACGCGTGGGCGGGGGCCGGGCGGGAGAGAGGGCGAGGGCG
GGGGCGGACGGTGGGACCCCGTGGCGTGACCATTGACGGGCAAGGCCAAC
ACGGTCGAGTAATGCCATCCTCCCGCTCTCACAGCCAAGACAGGCGCCAC
CATGCGTCCGACACTGTCTCACAAGATGGACCCCTCAGCCACTCCCCGAC
CTTCCCCCGAAACCGTCCTCTGGCCTCCTCCCCTCCAGCTTTCTCGCCTT
GCCGATTTCCCGCCCAGGAAATGCCAAGGAAAGAAGCGCCTTTAAGAAGA
AATCAAGGGAAGGGCGGTGGAGGTTCTGCTCACAAGTCTGTCTTTGTCAC
ATGGGGGAAGGCGGTGCGACGCTTGGTAGGGCGGGGGGGGGGAGGGCAAT
GAATGGAT back to top
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