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Properties
| Property Name | Value |
|---|
| Product | phosphoglycolate phosphatase |
| Orig transcript id | gnl|cribi|Naga_100005g112.6647.mrna |
| Orig protein id | gnl|cribi|Naga_100005g112.6647 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:695255..696636 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5316 ID=rna5316|Name=rna5316|organism=Nannochloropsis gaditana|type=mRNA|length=342bp
ATGCAATATGCGGTAGCGGTATATAGAAAGCTAGTTGCACTTTTTCTCAG
AAGCGGCCACCTCAACGTGGAATACGCCGGAACCCGTCCGCTCTCCGAAG
CTAAGCGCGTTCGAGTCCCAATAGTACTGCCGTGGGTGACCAGGCTGGAA
GGTGGGATGTCGCTTCTTTTTTATCTTCATTTGTGGGATAAAAGCTTGTC
GCAAATCGACCACATGTCCTCAGGACGACGCACTTTTCTAAGATTTTGTA
TAGTCTTTGTGTGTCGAAGATATGTGCGTCTGCTGGGGCGGAGAAAAGTT
GTAGTCATGGTCACGGGTTTATTACGGTCACTGTATGTCTAG back to topprotein sequence of rna5316 >rna5316-protein ID=rna5316-protein|Name=rna5316|organism=Nannochloropsis gaditana|type=polypeptide|length=346bp
MTTSITGAVTVKEAQYFVGTLRVRQREEAASRATSSLQSIQILDDSDPQA
LATVLDSYDTFLFDCDGVLWRGSALLPGSTRTLALLRAQGKRLFFVTNNS
SKSRAEYVAKFTKLNIPVDISEIVPSSWAAAEYVRIQYPEVKKAFVIGSQ
GLVDELNLVGVTSLCGADQSYATRCFATESDFLSAEIDKDVTAVLCGWDL
TFNFAKLSLASLYLQRKPTAAFIATNKDAFDKLADRNIPGNGCAVAALEQ
SVGREAVNVGKPSRWLINYLLRTYNLNPRRTLVIGDRLDTDIQLGIAGGC
DTVLVGTGCTTTEDALLEQEARKVGMPTYVLSHVGAFSLSAIPSKN back to topmRNA from alignment at CM002465.1:695255..696636- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5316 ID=rna5316|Name=rna5316|organism=Nannochloropsis gaditana|type=mRNA|length=1382bp|location=Sequence derived from alignment at CM002465.1:695255..696636- (Nannochloropsis gaditana)
GACACTGCCCACCCTCTGCCAGGAAATTGGAGGTCATGACCACTAGCATC
ACCGGAGCTGTAACAGTTAAAGAGGCACAATATTTTGTGGGGACGCTGAG
GGTGCGACAACGTGAAGAAGCGGCGAGCCGAGCAACGTCCTCCCTTCAGT
CTATTCAGATCCTCGATGATTCCGATCCACAAGCACTTGCAACCGTTCTA
GGTACGTATAAGTCGTTGGCATGCTAGGGGGAGAAATTTATGGTCTTAGC
ACGATGGACTTTGCGATTTGAAACGAAAATGCTTCAAATGGAAATGGTGA
CGAATTTCTACTTCGCAAGCCTTTTTTATGAGGCTTATTATACAGCTTTC
CTCGTCTTACCAACAGATAGTTATGACACTTTCTTGTTCGACTGTGATGG
GGTCCTTTGGCGCGGGAGCGCTCTCCTTCCAGGGTCTACGCGTACCCTGG
CCCTTCTGCGGGCTCAGGGAAAGCGACTCTTCTTTGTAACAAACAACAGT
AGCAAAAGCCGTGCTGAGTATGTCGCCAAGTTTACTAAATTGAATATTCC
TGTAGACATTTCGGAAATCGTACCTTCTTCGTGGGCTGCAGCTGAATATG
TACGAATTCAATATCCTGAGGTGAAAAAAGCATTTGTGATTGGCTCGCAG
GGTCTTGTAGATGAGTTAAATCTTGTTGGCGTCACCTCTCTGTGTGGAGC
TGATCAGTCGTACGCCACACGATGTTTTGCAACTGAGAGTGACTTCCTCT
CAGCGGAAATTGACAAAGATGTCACAGCTGTACTGTGTGGATGGGATTTG
ACTTTTAACTTTGCAAAATTAAGTCTCGCGAGTCTTTACTTGCAAAGAAA
GCCGACGGCGGCCTTCATCGCGACCAACAAGGATGCATTCGATAAGCTAG
CAGATCGAAACATCCCCGGAAATGGTTGCGCCGTTGCGGCCCTCGAACAG
AGTGTCGGACGAGAGGCAGTGAATGTAGGTAAACCATCGCGATGGTTGAT
AAATTATCTGTTGAGGACGTACAACTTAAACCCAAGAAGAACATTGGTAA
TTGGCGATAGGCTAGACACTGATATTCAGCTGGGTATCGCGGGGGGTTGT
GATACTGTCCTCGTAGGCACGGGGTGCACGACCACGGAAGACGCCTTACT
TGAACAGGAAGCCCGGAAGGTAGGGATGCCGACTTATGTGCTATCGCATG
TGGGTGCATTCAGCTTAAGCGCGATACCATCCAAGAATTGAAATAGAAGT
AAGGTAAGAACCAAAAGCGAGAAAATCGCACATAGCGTAGGCTCCCACAT
GCAGTAGGAGACACATAATTGAGCAAAGACTACAATATAAATGAATGGAC
AATGATGTGAGCAAAAAATACCGACGCTTTCA back to topCoding sequence (CDS) from alignment at CM002465.1:695255..696636- >rna5316 ID=rna5316|Name=rna5316|organism=Nannochloropsis gaditana|type=CDS|length=2082bp|location=Sequence derived from alignment at CM002465.1:695255..696636- (Nannochloropsis gaditana)
ATAGTTATGACACTTTCTTGTTCGACTGTGATGGGGTCCTTTGGCGCGGG
AGCGCTCTCCTTCCAGGGTCTACGCGTACCCTGGCCCTTCTGCGGGCTCA
GGGAAAGCGACTCTTCTTTGTAACAAACAACAGTAGCAAAAGCCGTGCTG
AGTATGTCGCCAAGTTTACTAAATTGAATATTCCTGTAGACATTTCGGAA
ATCGTACCTTCTTCGTGGGCTGCAGCTGAATATGTACGAATTCAATATCC
TGAGGTGAAAAAAGCATTTGTGATTGGCTCGCAGGGTCTTGTAGATGAGT
TAAATCTTGTTGGCGTCACCTCTCTGTGTGGAGCTGATCAGTCGTACGCC
ACACGATGTTTTGCAACTGAGAGTGACTTCCTCTCAGCGGAAATTGACAA
AGATGTCACAGCTGTACTGTGTGGATGGGATTTGACTTTTAACTTTGCAA
AATTAAGTCTCGCGAGTCTTTACTTGCAAAGAAAGCCGACGGCGGCCTTC
ATCGCGACCAACAAGGATGCATTCGATAAGCTAGCAGATCGAAACATCCC
CGGAAATGGTTGCGCCGTTGCGGCCCTCGAACAGAGTGTCGGACGAGAGG
CAGTGAATGTAGGTAAACCATCGCGATGGTTGATAAATTATCTGTTGAGG
ACGTACAACTTAAACCCAAGAAGAACATTGGTAATTGGCGATAGGCTAGA
CACTGATATTCAGCTGGGTATCGCGGGGGGTTGTGATACTGTCCTCGTAG
GCACGGGGTGCACGACCACGGAAGACGCCTTACTTGAACAGGAAGCCCGG
AAGGTAGGGATGCCGACTTATGTGCTATCGCATGTGGGTGCATTCAGCTT
AAGCGCGATACCATCCAAGAATTGAATGACCACTAGCATCACCGGAGCTG
TAACAGTTAAAGAGGCACAATATTTTGTGGGGACGCTGAGGGTGCGACAA
CGTGAAGAAGCGGCGAGCCGAGCAACGTCCTCCCTTCAGTCTATTCAGAT
CCTCGATGATTCCGATCCACAAGCACTTGCAACCGTTCTAGATAGTTATG
ACACTTTCTTGTTCGACTGTGATGGGGTCCTTTGGCGCGGGAGCGCTCTC
CTTCCAGGGTCTACGCGTACCCTGGCCCTTCTGCGGGCTCAGGGAAAGCG
ACTCTTCTTTGTAACAAACAACAGTAGCAAAAGCCGTGCTGAGTATGTCG
CCAAGTTTACTAAATTGAATATTCCTGTAGACATTTCGGAAATCGTACCT
TCTTCGTGGGCTGCAGCTGAATATGTACGAATTCAATATCCTGAGGTGAA
AAAAGCATTTGTGATTGGCTCGCAGGGTCTTGTAGATGAGTTAAATCTTG
TTGGCGTCACCTCTCTGTGTGGAGCTGATCAGTCGTACGCCACACGATGT
TTTGCAACTGAGAGTGACTTCCTCTCAGCGGAAATTGACAAAGATGTCAC
AGCTGTACTGTGTGGATGGGATTTGACTTTTAACTTTGCAAAATTAAGTC
TCGCGAGTCTTTACTTGCAAAGAAAGCCGACGGCGGCCTTCATCGCGACC
AACAAGGATGCATTCGATAAGCTAGCAGATCGAAACATCCCCGGAAATGG
TTGCGCCGTTGCGGCCCTCGAACAGAGTGTCGGACGAGAGGCAGTGAATG
TAGGTAAACCATCGCGATGGTTGATAAATTATCTGTTGAGGACGTACAAC
TTAAACCCAAGAAGAACATTGGTAATTGGCGATAGGCTAGACACTGATAT
TCAGCTGGGTATCGCGGGGGGTTGTGATACTGTCCTCGTAGGCACGGGGT
GCACGACCACGGAAGACGCCTTACTTGAACAGGAAGCCCGGAAGGTAGGG
ATGCCGACTTATGTGCTATCGCATGTGGGTGCATTCAGCTTAAGCGCGAT
ACCATCCAAGAATTGAATGACCACTAGCATCACCGGAGCTGTAACAGTTA
AAGAGGCACAATATTTTGTGGGGACGCTGAGGGTGCGACAACGTGAAGAA
GCGGCGAGCCGAGCAACGTCCTCCCTTCAGTCTATTCAGATCCTCGATGA
TTCCGATCCACAAGCACTTGCAACCGTTCTAG back to top
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