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Properties
| Property Name | Value |
|---|
| Product | gdh 6pgl endoplasmic bifunctional protein |
| Orig transcript id | gnl|cribi|Naga_100005g94.6743.mrna |
| Orig protein id | gnl|cribi|Naga_100005g94.6743 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:659875..661653 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5301 ID=rna5301|Name=rna5301|organism=Nannochloropsis gaditana|type=mRNA|length=2227bp
CGTCTCAGCGAATAGTGTCTGGGAGCGAACGGATGTCTGACTGCGCTGCT
GCGTACATTACACCCTGTCACTGAAAACGTTAGTCAATACAATTGCCGAC
CTCCACTCTTACATATGCATTCAAAGCTAACAGAAATTGAACTGGCAAAT
TTTAGAGCGCGTAAAAAACTTCCTGTGTCAGACGCTTTTGGAAGCTCTTT
CCCTCAAAGAAGCGTCTTTCTGCATTTTTTCGTACTACTGGCCCGTCTCC
ATTAGCTTTTAGAATACCATGGGGCAGCAACAAATATCTTGGCAACTCAA
AATTGAACTTTTGGCATTGTTTTTAGCCGGATATTTTGCCAGCTTGTCGT
CTGCCTTTGTGAGCCGGCCTCACGGCCCCCATGCCCCTGTTCCATCTCGG
CGGGGGACTGGAAGACGCGCCGTCTCGCTCCCGCAGGAGTTCGCTTCCCT
GGACATCCTGCTGTCGGAATCGAGCCTGGACATTGACATCCCCGTCTTGT
CACCGACCTCAGCATTGGAGGCGTTTGCGGTGCTGGCGGTGCCCCTCCTC
CTGTTCGCAGGCCTCCAACTCACCCGTCAGGGCGAGGGGACGGGAAACAC
GGAGAAAGACGACCCCATCAACGACATGAGCACCAACGACATACTCAGCA
AACTATTCAAGGAGGTGGAAGGGAAAGAGCCCACATCCATGTTCTCTTCC
TCCGCCTCGCCCCTCGCGTCCGCCAAGCTGGATGCCCGGGGCGGGGCGGG
GGGGCGGGGCCTCCTGGAAAGACCTCCAGCCCCAGCGCCTGTGGATGAGG
AATTGAGATTAAGGAAGGCGAGGGCCTTGGAGGAGGACGATCGGGCCAGA
ACGGCGGCGGCGAGGGCCAGAGAAGAGGAAGACAAGGCCCTCATCGCGGC
TGCGGCGGAGAAGGCAGCCGCCGCCAAGTCCGCCCAGGAGAAGGAGCGGC
TCCGCCTGGAGGCCGCGGCGAAGGCGATGGAAGCGAGAGTCGCGGAGGAA
GCGAAGGCTCGAGAGGAAGCAGCTGCGGAGGCTCTAAAGAAAAAAGAGGA
GGAGAAGGAACGGGAGGAAGAGCTGCGAAGACAACGGGAGACGAGGATGA
AGGAGGAGGCCGCGAAGGCCCGGGCTGCTGCGGAAGCCCGGGCTGCGGCC
GCGAAAGCGAAACGTGAGGAGGAGAAGGAGAGGGAGCAGAAGCGTAAGCT
TCTTGCGCGGATGATACGGGAGGATGCGGCCAAGAAGCAGGAAGAGCACG
AGAAGCGTCTGCTCGAGGCATGGAAGGAGCAGGAGCTGGCCCGGCGCGCC
GAACGGGCTCAAAAGGAGAGGCAGCCCACGAAGGGAGTTTCCGTGACGAG
CACTGAAAGGGGGAGGGGAAAGAAAAGCAGGGCGGGGAAAAAGGAAAGTA
AAATCTCTGTCGACCCGGTCGTGTCCGCTGCAGTGGCTCCCGCCGAGAAG
CCGATGGTGGCGGGCGAGAAGGAGGGCAAAGAGTGGGAGGAGATGCGCCG
CCTGGAGGAAGAGAGCGCGAAGCTCTTAGAGTTGTCTCCCTCCGCCCGCG
GCAACAAAAGAGCCTTTGTTCCCGAGGGAGAATTTGTGAAGAGGGGGGGC
AGGGCTTCGGTCCCGGTGGGCGTGCAGACGGCGGACTTGGCGGAGCCCGC
GATCGAGAGAAAGGTGAGCAAAGCCGAGGCAGAGAAAGAGCGGAAGGAGC
TTCTCATGGGCCTGGATGCGGTGATGCAGGACCTGCAGCGACGGGCGGAG
GAGAAGAAGGGGCAGCTCACAGCTGTCAGGGAGAAGAAAATCGCTGCCAG
CGACCCGGCCTCGCCTCCCGGCCCCAAGAAGACCGGACGGACGAAGGGCA
AAGCCGCGTCGGCGCCGGCGGCGGGAGGAGTGCCACCGACACCGGGGAAA
GGCGATGATTTGACCGTAGTCGCCAGGAAGCTCACAGTGCCCAAGCTCAA
GGCGATCCTGCAGGCGCAGCAGGTCAAGCCATCCTCGAGCCGTGCCAAGA
AGGACGAGCTCGTGCGCCTGGTGGTCGCTCTAGCGGTGGAGAACCCAACG
ATCTTGGCAGAGGAGGGGGCAAGAAGGGATGTTCTGCATGCTGTAATGCA
CATATACATGAAATTTGGAATCTTTGAGTGGGAAATTGCAGCGCTTAACA
TTGAATGCGATAAAAAAGGATTTCGAAATCGAACTCGGATCAATCGCAAG
CCCGAAAGAATACTCAAAAAATCGTAA back to topprotein sequence of rna5301 >rna5301-protein ID=rna5301-protein|Name=rna5301|organism=Nannochloropsis gaditana|type=polypeptide|length=335bp
MGKGVVQAILPFRRANRGWLEALWTGRHVGAVEVSMKETEDCQGRTSFYE
GYGVIRDVLQNHLTQVLVLLKMDIPPDKESTSSPSLGSHHHRTAVLRELV
LGGETEGGESRASIHVGQYQGYLDHVASDRRSEPRVVRTSVPTAASVTLA
SRHPRWGGVSFTLKAGKALDERTSYARVVLCDGVPEGAAKAGCACELLFN
IQGGKFGTAIAWNRTACTGMIEPAAVVTPPGWLSVENEGENGLAADWQVL
RPTAGENAPNAYDMVVAAVLSGDRSMFLDTEELLHQWRVWDNVLSKADTM
EPELYPKGFALDEVEMSGLIGSVSEENEDSPHIEL back to topmRNA from alignment at CM002465.1:659875..661653+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5301 ID=rna5301|Name=rna5301|organism=Nannochloropsis gaditana|type=mRNA|length=1779bp|location=Sequence derived from alignment at CM002465.1:659875..661653+ (Nannochloropsis gaditana)
TAGAGGcatatgtgtgtgtgtgtgcgagagagagagaaagagttTGAGTG
TACGCGGGAGGGCTCATGTCGGGGGCCATGTCTCGGCCCCCCTGGCATTG
AGAACGTGGTCTCAGTGGATGACTGGGAGCTGTTGTCTGCCTTTTTACTA
CCCCGTCGAATGCGCGTCGCCTGCTGCTACCGTGACACAGCCCTCAACGC
GTGCCAGACTGCAACTCTCACCCGTTCGCCCTGATTCTTCCCCACCCAGG
ACCTCGCCTCCGCGGAGGCCCTTGCGGCCGCCCTCGGCCAGCacctggcg
gaggacgagttGTACCGCGTGGACCACTACATGGGAAAGGGCGTGGTGCA
GGctatcctccccttccgccgcgCCAACCGCGGGTGGCTGGAggctttgt
ggaccgggcggCACGTGGGCGCGGTGGAGGTGTCCatgaaggagacggag
gactGCCAGGGGCGCACCTCCTTCTACGAGGGCTACGGCGTCATCCGCGA
CGTGCTGCAGAACCACCTGACGCAGGTACTGGTCTTGCTGAAGATGGACA
TCCCCCCGGACAAGGAgagcacgtcctccccctccctgggctctcaccac
caccgcacTGCCGTTTTGCGCGAGCTGGTGCTGGGGGGCGagaccgaggg
cggggagtcCCGAGCCTCCATCCATGTGGGCCAGTACCAAGGCTACCTGG
ACCACGTCGCGTCCGACCGACGTTCCGAGCCCCGGGTGGTGAGGACCAGC
GTGCCCACGGCGGCCTCCGTCACTTTGGCCTCGAGGCACCCGCGTTGGGG
GGGCGTCAGCTTCACTCtcaaggcggggaaagcgCTGGACGAGCGGACCA
GCTACGCCCGCGTCGTCTTGTGCGATGGAGTCCCTGAGGGCGCAGCAAAG
GCGGGCTGTGCATGCGAGCTCTTGTTCAATATTCAAGGGGGGAAGTTTGG
GACCGCCATCGCTTGGAACCGGACGGCCTGCACGGGAATGATAGAACCGG
CAGCTGTTGTGACGCCACCAGGCTGGCTCTCGGtcgaaaatgaaggagaa
aacGGACTGGCCGCTGATTGGCAGGTCCTGAGGCCAACGGCGGGGGAGAA
TGCGCCGAACGCGTACGacatggtggtggcggccgtgcTGAGTGGGGATA
GGTCAATGTTTTTGGATACGGAGGAGCTCCTGCATCAGTGGCGGGTGTGG
GACAATGTTCTGAGCAAAGCTGACACTATGGAGCCCGAGTTGTATCCGAA
GGGCTTCGCTTTGGACGAAGTTGAGATGTCTGGTCTCATCGGGAGCGTTT
cggaggagaatgaggacTCGCCGCACATTGAGTTGTGAAAATATAActtt
gaaaaaagaaagacacTGTACGATACTGGAAGCGGTGCTCATAGCGAAAC
AAACCATAAATGTTTATAGTGAAGACAAGAATACTTCGCCAGATTTATGA
TGGTTTCATGTGCGGCTGAGGTCGAAACTGTGCGAGATagagggagacag
agatGTACGGGTTTCTTAGGTGGGACCATAATGCGTGCTGAAATGCGGAG
CAGGTTCACTCCAGGGTTGAGGACGGCCACATTGTATGACATGCAGGGGG
CTGCTGAAGGACAGACATTTTTCATTGGAACCTTTTGACCGCCCGGGTTG
TTACCTGAGAATGGGCGTGCTGCTCATGGCCAGGCGCTGTCTGTCaactc
tttccttttttattaTTAAATGTCACGTTTCCATTTTAACAATGTACCGG
ACATAGGTATTAGTGTAAAAAATTATGAC back to topCoding sequence (CDS) from alignment at CM002465.1:659875..661653+ >rna5301 ID=rna5301|Name=rna5301|organism=Nannochloropsis gaditana|type=CDS|length=1008bp|location=Sequence derived from alignment at CM002465.1:659875..661653+ (Nannochloropsis gaditana)
ATGGGAAAGGGCGTGGTGCAGGctatcctccccttccgccgcgCCAACCG
CGGGTGGCTGGAggctttgtggaccgggcggCACGTGGGCGCGGTGGAGG
TGTCCatgaaggagacggaggactGCCAGGGGCGCACCTCCTTCTACGAG
GGCTACGGCGTCATCCGCGACGTGCTGCAGAACCACCTGACGCAGGTACT
GGTCTTGCTGAAGATGGACATCCCCCCGGACAAGGAgagcacgtcctccc
cctccctgggctctcaccaccaccgcacTGCCGTTTTGCGCGAGCTGGTG
CTGGGGGGCGagaccgagggcggggagtcCCGAGCCTCCATCCATGTGGG
CCAGTACCAAGGCTACCTGGACCACGTCGCGTCCGACCGACGTTCCGAGC
CCCGGGTGGTGAGGACCAGCGTGCCCACGGCGGCCTCCGTCACTTTGGCC
TCGAGGCACCCGCGTTGGGGGGGCGTCAGCTTCACTCtcaaggcggggaa
agcgCTGGACGAGCGGACCAGCTACGCCCGCGTCGTCTTGTGCGATGGAG
TCCCTGAGGGCGCAGCAAAGGCGGGCTGTGCATGCGAGCTCTTGTTCAAT
ATTCAAGGGGGGAAGTTTGGGACCGCCATCGCTTGGAACCGGACGGCCTG
CACGGGAATGATAGAACCGGCAGCTGTTGTGACGCCACCAGGCTGGCTCT
CGGtcgaaaatgaaggagaaaacGGACTGGCCGCTGATTGGCAGGTCCTG
AGGCCAACGGCGGGGGAGAATGCGCCGAACGCGTACGacatggtggtggc
ggccgtgcTGAGTGGGGATAGGTCAATGTTTTTGGATACGGAGGAGCTCC
TGCATCAGTGGCGGGTGTGGGACAATGTTCTGAGCAAAGCTGACACTATG
GAGCCCGAGTTGTATCCGAAGGGCTTCGCTTTGGACGAAGTTGAGATGTC
TGGTCTCATCGGGAGCGTTTcggaggagaatgaggacTCGCCGCACATTG
AGTTGTGA back to top
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