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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100115g18.6571.mrna |
| Orig protein id | gnl|cribi|Naga_100115g18.6571 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1327446..1328444 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna529 ID=rna529|Name=rna529|organism=Nannochloropsis gaditana|type=mRNA|length=1963bp
AGACGTCTACAAGTTCAAATCATTTGAGGCACGACACGCTTAACAGTGGA
TTACAAAAATCATGAGACCCTCCACGTACGACGGAGTGCAACGCCACAGC
ATACGTTCCTCAGTCTCGAAGGCCACTCCCAGCATCACTGCCCTCGTCTT
GAAACTTTCGCTCTCACTAGGCCTTTTGGTGTCGGGCACCGATGCATTTG
TCTCGGCGGCGTCCTTATCTTCGGTGCCCCCCGCAGGGAGAGCGACAACC
TCGACTGGATTAATAATTCGAACCCGAGGCGGGGACAGCACCGGCAAGAG
AAATGTTGGACCGCTCTTCTTCCAAAAGCGAGTGGGAGGTGCCGTGGATG
TGCAAGATCCACCGGTTCTTGACGTGCAAGAATCCCTTGACAAACAGGAG
GAAGAGCAAAGGCGGGCACCCACGTTCATCCGGGCAGTGTCGGAGAGGTT
AACGCGTTTCAATCCTGCATCCTCCGATCGAAGTGACGCCATGGCCATGA
TCGAGACTGCGATGCCCGTGGCAGAAAGCAGACAACGCACGGAGGACCGT
TCTCTACCAACCACAGAGCCAGAGGACTCTGAGCCTCTCACCCTCACCAG
CGCCATCGCCCTGGTGGCGGGCACCACCGTCGGGGCGGGGATTTTAGCCC
TGCCTGCTTTCACCATCAAGGCCGGATTCCTCCCGTCCTCCCTTTGCTTG
AGCGCGGCCTGGGTGTACATGGTCACGACCGGGCTGCTCATTGCCGAGGT
CAACCTGAACGTGGCGGGGAAATCCCACCAACCCGACGGCGGACTGGTCA
GCATGGCCCGGAGGACGATCGGGGATACAGGGGCCAACCTGACCGGCGCT
GCCTACATGTTTTTGCACTATGCCTTGCTGGTTGCGTACATTGCCCAAGG
CGGGGATATCCTCACAGGGGCCTTAGAAGGCGCAGGAGCCGCCTTAGGAT
TTGGGGGAGGAGATGCCGTGGTCCTGCCGGCACAGGTGGCACCCGTGCTC
TTCACGGCAGTCTTGGGGGGAGCCTTGGCTTTTGGGAACAAAAAATGGCT
GGATAGTGCCAACGACGCTTTGGTTGGGGTGGTGGTGGTGGCGTTTCTGG
CCCTTGTGGCCGCGGCAGGTCCCCGGGCCGACCCTGGGGGCCTCATGCGA
GCCAACTGGACGGCCATGCTCCCTTCCATTCCCGTCATGTTTGTGGCCCT
GGTCTACCATAACATCGTGCCCGTCATCAGCTACCGCCTGAGAGGCGACG
CAGACAAAATCCGGACCTCCATCGTCGTCGGCTCCGGTATCCCGCTCCTT
ATGTTCTTGGCCTGGAACGCCGTGATCCTGGGCAACATCGATGCCTCCAT
ACTGACGGCCACTAGCGCCTCGGGCGGGACGATTGACCCCTTGGCGGTGC
TGCGGGCGGGCGGCGCGGGCCACACGCTGGGGAACTTGATCTCCCTCTTT
TCGGAGGTGGCCATCGTCACCAGTTTCACTGGCTTTGTCTACGGCCTCAA
AGATTTCTTCAAGGACGTTCTCTTCTCCGGGGCCCTGGCCCGGTCTGGCA
CCCGGCACCTCTCCCACAACCAAGACATGCTTGCCTACAGCTTGATCCTC
TTCCCCCCCTTGGCAGTGGCGCTGGTCAACCCGGACATTTTCTTCTCCGC
CTTGGACAATGCGGGGGCGTTTGGGATTTGCGTCCTCTTTGGCATCATCC
CCGCGGTTATGGCGGCCATCGTACGGCACCGGAGCCAAGAAGCGACCGGG
GGAGGGGTGGAAGGAGGGGGGGAGGGAGAAGAAAAGAGGTTGGGAGGTAC
TGATAGAGAGGAAATTCTGTACATAAGCATCTCTTCAATCTGTGACCACT
CAGTCGAAGTAGCAAAGAAGGCACTGGGAGCAAACTTTGCACGAAAGAAA
GCATTTGCTTGCCCGTGGGGCACGTGTAGGAAATATGTTGTTGTGCAAAA
CCATCCATCGTGA back to topprotein sequence of rna529 >rna529-protein ID=rna529-protein|Name=rna529|organism=Nannochloropsis gaditana|type=polypeptide|length=248bp
MGGHPSKPARHGRCCNSRERAFMLVSWDAAFLTRMMRSATSLEDNGREVD
AAQRVMDLSQIFAVAPPPVVDARRLLTLVEQGVQNQSATTLNNTTTPVFR
WVRARLVLFAPEVTPSLAQLQQNTRLWRIFRRRRYFPVLGPRDLQAQVVA
QALNRFQRHAKRHGPGVIVIVAGDGALEAVPSFATSLRAMLRWGHRLEVW
SWEGAVPPPLHGTGRGVGRRKGPCVFSECTPAHDTVPIRRFRGHQCLR back to topmRNA from alignment at CM002455.1:1327446..1328444+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna529 ID=rna529|Name=rna529|organism=Nannochloropsis gaditana|type=mRNA|length=999bp|location=Sequence derived from alignment at CM002455.1:1327446..1328444+ (Nannochloropsis gaditana)
ATGTGAGGTGCAACGAGGCTCATAaaatcccccccctccacgccctttAT
TTGCATTCCACTAATACCAGGAAATGGGGGGACATCCGTCCAAACCTGCC
CGTCATGGAAGATGCTGTAATTCAAGAGAACGAGCCTTCATGCTCGTGTC
TTGGGATGCTGCATTTTTGACCCGCATGATGCGTTCCGCAACCTCACTTG
AAGACAATGGGAGAGAGGTCGACGCGGCACAGCGGGTGATGGATTTAAGC
CAGATATTCGCGGtcgccccgcctcctgttGTGGATGCCCGTCGTTTGCT
AACTCTGGTGGAGCAGGGCGTTCAAAATCAGTCTGCAACCACACTCAaca
acaccaccacccccgtCTTTCGATGGGTTCGGGCCCGCCTGGTCCTTTTC
GCCCCCGAGGTCACGCCGTCCCTGGCCCAACTACAGCAAAACACCCGCTT
GTGGCGTATTTTCCGTCGCCGGCGCTATTTTCCTGTGTTGGGGCCTCGGG
ATTTGCAAGCACAGGTGGTTGCTCAAGCATTGAACCGCTTCCAGCGTCAC
GCCAAGCGCCACGGCCCGGGTGTGATTGTCATTGTCGCCGGGGACGGGGC
TTTGGAGGCAGTCCCTAGCTTTGCCACCTCCTTGCGCGCGATGCTCCGGT
GGGGCCATCGTTTGGAAGTGTGGTCGTGGGAAGGGgctgtccccccccct
ctacATGGAACTGGCAGGGGAgttgggagaaggaagggtcCGTGTGTTTT
CTCTGAATGCACACCGGCACATGATACGGTACCGATCAGGAGGTTTCGAG
GACACCAGTGCCTCCGTTAGTGCCTCTGCTCGTGGAAggagtggggaagg
agagggagcctcCAGCTCCCAGGTCTCCCCTGGGGTGgcacttcctcgcc
ctcccggtGACGGAGAGCTGCCCGTTGCCATGCCGATGGCCACGCCcgta
gagggagaggggatgtCTATCCTCGCGCAAGTCCAAGGGTGGCTGTCCC back to topCoding sequence (CDS) from alignment at CM002455.1:1327446..1328444+ >rna529 ID=rna529|Name=rna529|organism=Nannochloropsis gaditana|type=CDS|length=747bp|location=Sequence derived from alignment at CM002455.1:1327446..1328444+ (Nannochloropsis gaditana)
ATGGGGGGACATCCGTCCAAACCTGCCCGTCATGGAAGATGCTGTAATTC
AAGAGAACGAGCCTTCATGCTCGTGTCTTGGGATGCTGCATTTTTGACCC
GCATGATGCGTTCCGCAACCTCACTTGAAGACAATGGGAGAGAGGTCGAC
GCGGCACAGCGGGTGATGGATTTAAGCCAGATATTCGCGGtcgccccgcc
tcctgttGTGGATGCCCGTCGTTTGCTAACTCTGGTGGAGCAGGGCGTTC
AAAATCAGTCTGCAACCACACTCAacaacaccaccacccccgtCTTTCGA
TGGGTTCGGGCCCGCCTGGTCCTTTTCGCCCCCGAGGTCACGCCGTCCCT
GGCCCAACTACAGCAAAACACCCGCTTGTGGCGTATTTTCCGTCGCCGGC
GCTATTTTCCTGTGTTGGGGCCTCGGGATTTGCAAGCACAGGTGGTTGCT
CAAGCATTGAACCGCTTCCAGCGTCACGCCAAGCGCCACGGCCCGGGTGT
GATTGTCATTGTCGCCGGGGACGGGGCTTTGGAGGCAGTCCCTAGCTTTG
CCACCTCCTTGCGCGCGATGCTCCGGTGGGGCCATCGTTTGGAAGTGTGG
TCGTGGGAAGGGgctgtccccccccctctacATGGAACTGGCAGGGGAgt
tgggagaaggaagggtcCGTGTGTTTTCTCTGAATGCACACCGGCACATG
ATACGGTACCGATCAGGAGGTTTCGAGGACACCAGTGCCTCCGTTAG back to top
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