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Properties
| Property Name | Value |
|---|
| Product | papain family cysteine protease containing protein |
| Orig transcript id | gnl|cribi|Naga_100005g81.6701.mrna |
| Orig protein id | gnl|cribi|Naga_100005g81.6701 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:627114..630052 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5288 ID=rna5288|Name=rna5288|organism=Nannochloropsis gaditana|type=mRNA|length=1089bp
ATGGGGGCATTGGAAGCAATGACGACCCCTCAAGCGCAGGTTGCCAAGGC
ATTCGGGAAAAAAAAGACGCTTTACGAGATCCTAGACGTCGCTAAGGATG
CGGCCTCGGCGGTAATTCGCAAGGCTTACTTCAAAATGGCATTGACATGC
CACCCCGACAAGTGCCCCGAAGACCCCGAGGCCACCGCGCGCTTCCAAGC
CCTCTCCATCGTCCATGCAACTCTAAGTGACGCCGACAAACGCCGCAACT
ACGACGAAACGGGTGAGATCGGATCGGAGGACGCTGAGCTCAACCAAAGC
GAGCAAGAGTGGTACGACTACTGGCGCGCGCTCTTCCCCACCGTGACGGT
GGAGAAGATTGACCGGTTCAAGGAGGAGTACCGGGAAAGCGAGGAGGAGG
CCAGGGACGTCTTGAAGGCCTACGAAGAGGCGCAGGGAAAGATGAGTCTA
GTGATCGACAGCGTCATGCTCGCCACGGATGAGGACGAGGGACGTTTCCG
AAAGATGATTGAGGAAGCGATTGTGAATAAGAGGGTCAAGCGCTTGAAAT
GTTTTAAGGCCGAGGTACGGAAGGACCTCAAGCGAAAGAAGCGGGCCGAA
AAGGAGGCGAAGGAGGCAGAGGAGCTCTTGGAAGCCATCCAGGCCCGAAG
AGGCCCCGACGCCCTGGCGACCATGGGCCGCGACAGACAGCAGCAGATGT
CGAGCTTCTTGCAATCGCTTGAGGAGAAGTATGGGAAAGGCAAGAAGCCA
AAGGACCGAGGACATCGACGATGCGGATTTCGAGCGCCTGCGGGACTCCC
TCTGCAAAAAGAAAGTGGAGGAGCGACGAGACTAGCACCACAAATCTGGA
GAGCTACTCACGTCCTCCGTCGAGCACGGCGTGTTGATATCTCTGTCGTG
GGCGCAAGAGGACACTTTGTGGCGCGATCAGTCATCACCACCCCCTGGCG
TTCGATGGGTTGGCCTGGTGTGTACACACGCTGGAAGACAGCAAGGGGCC
GGTCGCGGGTAGGATGTGCTACTGTGGATGAACTGATAGGATGGAACAGC
TTGAGTGTGAGCTTGAAACATGCTCTGATAGATGACTAA back to topprotein sequence of rna5288 >rna5288-protein ID=rna5288-protein|Name=rna5288|organism=Nannochloropsis gaditana|type=polypeptide|length=412bp
MYASGLRIAAVAKVVIVLTNLAFALSGREGKAHLRHSSPASRLSLDLEPH
HRYTFEEFVRDFGKEYVPGSTEYQRRETIFADRLRVVQEHNAANSRRGTT
FRKGVNQYSDWTDAELRGLLGFKPSAQWHVKRQPRLEVLSAAMESSHSNS
SGAFSRQERLLTNLPSHVDWREKGAVTKPKNQGACGSCWTFSGVEAIESA
LWLSTGKLFTLSEQEFVSCTSNPEHCGGTGGCFGATQDILYEYVLAHGFT
LERDYPYVSGNGSEPMCLNQPLHVGSIAGYVDLPPNDLAAHLLAVNSQPL
AISLDASDFHNYHSGVLTFQDCGADLNHAVVLVGYGTDEETGIDFFLVRN
SWGEEWGESGYIRLARSQECAVDTTPLDGTGCEGGVDELTVCGTCGMLFS
SSYPVGAFLFQD back to topmRNA from alignment at CM002465.1:627114..630052- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5288 ID=rna5288|Name=rna5288|organism=Nannochloropsis gaditana|type=mRNA|length=2939bp|location=Sequence derived from alignment at CM002465.1:627114..630052- (Nannochloropsis gaditana)
CACGTGGGCCGGACAAGCAATCCGAGCATAGTCGACAGACCCGGCCCTCA
GGAGACATTCTTCTAATATGAATAATTTGCCGCGGTGCAAAATTCTGGTA
AATCAAAGTTTTGACGAGATGAAAAGGAATTGACGGCATCCTAGAAAAGC
CCTGCTTACTATTCCTTCTGCTTACTCCACACGTGTGCAGACACCTCGAC
AAAGCCTTAGTGGCATTATTTTGACCGTCTCTGCCAAAATGTATGCCTCA
GGCCTTCGCATTGCTGCGGTAGCCAAAGTGGTGATCGTGCTGACAAACCT
TGCGTTCGCCCTGTCAGGCCGCGAAGGGAAAGCTCACCTTCGGCATTCCT
CTCCTGCCTCCCGGCTCTCTTTGGATCTGGAACCCCACCACCGATACACC
TTTGAGGAATTCGTCCGAGACTTCGGCAAGGAGTATGTCCCTGGCTCGAC
GGAGTATCAGCGGCGTGAGACCATCTTTGCAGATCGCTTGCGTGTGGTAC
AAGAGCATAATGCCGCGAATAGCCGTCGTGGGACGACGTTCCGGAAAGGT
GTCAACCAGTACTCCGATTGGACGGACGCCGAGCTCCGAGGCCTGCTAGG
CTTTAAACCCTCAGCCCAATGGCACGTCAAGCGTCAACCTCGCTTGGAGG
TGTTGTCGGCGGCTATGGAATCTAGCCACAGCAACTCCTCTGGGGCTTTC
TCTCGACAGGAGCGCCTTCTGACAAACCTACCCTCCCACGTAGACTGGCG
TGAGAAGGGCGCGGTCACGAAACCAAAGAACCAAGGGGCGTGCGGATCGT
AAGTGGAGGGGGAAACCCGAGTGCGGGCTGTGCCCATGGGTGGGGAGTTT
CGCGCCGAGCCTGACAGCCGCCCTCTCTCCTTTCTCTCGCCTCGTCTCTT
TCACAGCTGCTGGACGTTCTCCGGTGTGGAAGCCATCGAGAGCGCCTTAT
GGCTGAGTACCGGGAAGTTGTTCACCCTCTCGGAGCAAGAGTTCGTCTCC
TGCACCTCCAACCCCGAGCACTGCGGCGGCACAGGTGGCTGCTTCGGCGC
CACCCAGGACATCCTCTACGAGTACGTGCTGGCCCACGGCTTCACGCTGG
AGCGGGACTACCCCTACGTCTCTGGTAATGGAAGCGAGCCCATGTGTCTC
AATCAGCCCCTGCACGTGGGCTCTATCGCCGGCTACGTGGACTTGCCCCC
CAACGACCTGGCGGCCCATCTCCTCGCAGTGAACAGCCAGCCATTGGCCA
TCTCCTTGGACGCCTCTGACTTCCACAACTACCACTCGGGCGTCTTGACT
TTCCAGGTAAGCGATGCTCACCCGATGGGGAAGGGAGTTGACCGCCCACT
GAAGAGTCAACGCCGCGATAACTTACCGTCCTCCTTCTTGTGTCCGTGCT
GTTCGCTCTCAGGACTGCGGAGCGGACCTCAACCACGCGGTCGTCCTTGT
GGGCTACGGCACAGACGAGGAAACGGGCATTGACTTCTTCCTGGTCCGCA
ACAGCTGGGGGGAAGAGTGGGGGGAGTCGGGTTATATCCGCCTTGCGCGG
TCGCAGGAATGCGCCGTGGACACGACGCCCTTGGACGGGACAGGCTGCGA
GGGGGGGGTGGATGAGCTGACTGTGTGTGGCACATGCGGGATGCTCTTCA
GCTCGTCCTACCCGGTAGGCGCGTTCCTATTTCAGGATTGAGGATTCGGG
ATTGAGGATTCGGGAGGGTGGCGGCAAGAACGCCGGTCGACGTGTGTGGG
GCAGGAAGAAGGATTAGCATTGCAAGAGCCGCCTCCGGTAAGGGTCCGCG
CAGGGTCACGAAGGAGAGGAGCCACCTTTATCAGACACTATCCAATTTTG
GCTCATGTTGTGTCCATCAGTACTCGTAGCCAAAGCAAAGAATCCTCCCA
GACGAGCATGGCAGGTGTCAGCCTTCAGGATGCGGGCCCAGACAGGACCC
GGGGTTCAAGCGGCTTGGTGCAAGGGAATGCCGCCGAGAGACGCGCTGAA
TAGGGAAAACGCGGAGGCCGGGGAAAGGACGGGCTTCCACAGTGTAAAAA
AGATAAAAGTAAAGAGTTATAAATCGCGCTCCAAATTCACGACATAACTA
CAAGCACTTGCATGTGCGATTAGTCATCTATCAGAGCATGTTTCAAGCTC
ACACTCAAGCTGTTCCATCCTATCAGTTCATCCACAGTAGCACATCCTAC
CCGCGACCGGCCCCTTGCTGTCTTCCAGCGTGTGTACACACCAGGCCAAC
CCATCGAACGCCAGGGGGTGGTGATGACTGATCGCGCCACAAAGTGTCCT
CTTGCGCCCACGACAGAGATATCAACACGCCGTGCTCGACGGAGGACGTG
AGTAGCTCTCCAGATTTGTGGTGCTAGTCTCGTCGCTCCTCCACTTTCTT
TTTGCAGAGGGAGTCCCGCAGGCGCTCGAAATCCGCATCGTCGATGTCCT
CGGTCCTTTGGCTGCCTCGCGCGCCCTCTCGCGCCCCTCCATCCCTCTTT
CTCCCTTTCCCACCAGCCTCCTTACAGCCACTGCCGCCTACCTTCTTGCC
TTTCCCATACTTCTCCTCAAGCGATTGCAAGAAGCTCGACATCTGCTGCT
GTCTGTCGCGGCCCATGGTCGCCAGGGCGTCGGGGCCTCTTCGGGCCTGG
ATGGCTTCCAAGAGCTCCTCTGCCTCCTTCGCCTCCTGTGCTCATGGAAG
GTCAAGAGGGACATTCCGTCGTAATGGGAAAGAGCGAGCGTTCGGGTCAA
CGATTGTGCATTGTGGGGGGCTGAGAAGAGGGAGAAACAGCAGGATGCTA
AGCAAGGTGTCTTGACGACAATCTGTCTTGAATGCCTTTCTGAGGCCATG
GCACATGTACACAGCGTGCTTTCACTTTTACCTTTTCGGCCCGCTTCTTT
CGCTTGAGGTCCTTCCGTACCTCGGCCTTAAAACATTTC back to topCoding sequence (CDS) from alignment at CM002465.1:627114..630052- >rna5288 ID=rna5288|Name=rna5288|organism=Nannochloropsis gaditana|type=CDS|length=3717bp|location=Sequence derived from alignment at CM002465.1:627114..630052- (Nannochloropsis gaditana)
GACTGCGGAGCGGACCTCAACCACGCGGTCGTCCTTGTGGGCTACGGCAC
AGACGAGGAAACGGGCATTGACTTCTTCCTGGTCCGCAACAGCTGGGGGG
AAGAGTGGGGGGAGTCGGGTTATATCCGCCTTGCGCGGTCGCAGGAATGC
GCCGTGGACACGACGCCCTTGGACGGGACAGGCTGCGAGGGGGGGGTGGA
TGAGCTGACTGTGTGTGGCACATGCGGGATGCTCTTCAGCTCGTCCTACC
CGGTAGGCGCGTTCCTATTTCAGGATTGACTGCTGGACGTTCTCCGGTGT
GGAAGCCATCGAGAGCGCCTTATGGCTGAGTACCGGGAAGTTGTTCACCC
TCTCGGAGCAAGAGTTCGTCTCCTGCACCTCCAACCCCGAGCACTGCGGC
GGCACAGGTGGCTGCTTCGGCGCCACCCAGGACATCCTCTACGAGTACGT
GCTGGCCCACGGCTTCACGCTGGAGCGGGACTACCCCTACGTCTCTGGTA
ATGGAAGCGAGCCCATGTGTCTCAATCAGCCCCTGCACGTGGGCTCTATC
GCCGGCTACGTGGACTTGCCCCCCAACGACCTGGCGGCCCATCTCCTCGC
AGTGAACAGCCAGCCATTGGCCATCTCCTTGGACGCCTCTGACTTCCACA
ACTACCACTCGGGCGTCTTGACTTTCCAGATGTATGCCTCAGGCCTTCGC
ATTGCTGCGGTAGCCAAAGTGGTGATCGTGCTGACAAACCTTGCGTTCGC
CCTGTCAGGCCGCGAAGGGAAAGCTCACCTTCGGCATTCCTCTCCTGCCT
CCCGGCTCTCTTTGGATCTGGAACCCCACCACCGATACACCTTTGAGGAA
TTCGTCCGAGACTTCGGCAAGGAGTATGTCCCTGGCTCGACGGAGTATCA
GCGGCGTGAGACCATCTTTGCAGATCGCTTGCGTGTGGTACAAGAGCATA
ATGCCGCGAATAGCCGTCGTGGGACGACGTTCCGGAAAGGTGTCAACCAG
TACTCCGATTGGACGGACGCCGAGCTCCGAGGCCTGCTAGGCTTTAAACC
CTCAGCCCAATGGCACGTCAAGCGTCAACCTCGCTTGGAGGTGTTGTCGG
CGGCTATGGAATCTAGCCACAGCAACTCCTCTGGGGCTTTCTCTCGACAG
GAGCGCCTTCTGACAAACCTACCCTCCCACGTAGACTGGCGTGAGAAGGG
CGCGGTCACGAAACCAAAGAACCAAGGGGCGTGCGGATCGACTGCGGAGC
GGACCTCAACCACGCGGTCGTCCTTGTGGGCTACGGCACAGACGAGGAAA
CGGGCATTGACTTCTTCCTGGTCCGCAACAGCTGGGGGGAAGAGTGGGGG
GAGTCGGGTTATATCCGCCTTGCGCGGTCGCAGGAATGCGCCGTGGACAC
GACGCCCTTGGACGGGACAGGCTGCGAGGGGGGGGTGGATGAGCTGACTG
TGTGTGGCACATGCGGGATGCTCTTCAGCTCGTCCTACCCGGTAGGCGCG
TTCCTATTTCAGGATTGACTGCTGGACGTTCTCCGGTGTGGAAGCCATCG
AGAGCGCCTTATGGCTGAGTACCGGGAAGTTGTTCACCCTCTCGGAGCAA
GAGTTCGTCTCCTGCACCTCCAACCCCGAGCACTGCGGCGGCACAGGTGG
CTGCTTCGGCGCCACCCAGGACATCCTCTACGAGTACGTGCTGGCCCACG
GCTTCACGCTGGAGCGGGACTACCCCTACGTCTCTGGTAATGGAAGCGAG
CCCATGTGTCTCAATCAGCCCCTGCACGTGGGCTCTATCGCCGGCTACGT
GGACTTGCCCCCCAACGACCTGGCGGCCCATCTCCTCGCAGTGAACAGCC
AGCCATTGGCCATCTCCTTGGACGCCTCTGACTTCCACAACTACCACTCG
GGCGTCTTGACTTTCCAGATGTATGCCTCAGGCCTTCGCATTGCTGCGGT
AGCCAAAGTGGTGATCGTGCTGACAAACCTTGCGTTCGCCCTGTCAGGCC
GCGAAGGGAAAGCTCACCTTCGGCATTCCTCTCCTGCCTCCCGGCTCTCT
TTGGATCTGGAACCCCACCACCGATACACCTTTGAGGAATTCGTCCGAGA
CTTCGGCAAGGAGTATGTCCCTGGCTCGACGGAGTATCAGCGGCGTGAGA
CCATCTTTGCAGATCGCTTGCGTGTGGTACAAGAGCATAATGCCGCGAAT
AGCCGTCGTGGGACGACGTTCCGGAAAGGTGTCAACCAGTACTCCGATTG
GACGGACGCCGAGCTCCGAGGCCTGCTAGGCTTTAAACCCTCAGCCCAAT
GGCACGTCAAGCGTCAACCTCGCTTGGAGGTGTTGTCGGCGGCTATGGAA
TCTAGCCACAGCAACTCCTCTGGGGCTTTCTCTCGACAGGAGCGCCTTCT
GACAAACCTACCCTCCCACGTAGACTGGCGTGAGAAGGGCGCGGTCACGA
AACCAAAGAACCAAGGGGCGTGCGGATCGACTGCGGAGCGGACCTCAACC
ACGCGGTCGTCCTTGTGGGCTACGGCACAGACGAGGAAACGGGCATTGAC
TTCTTCCTGGTCCGCAACAGCTGGGGGGAAGAGTGGGGGGAGTCGGGTTA
TATCCGCCTTGCGCGGTCGCAGGAATGCGCCGTGGACACGACGCCCTTGG
ACGGGACAGGCTGCGAGGGGGGGGTGGATGAGCTGACTGTGTGTGGCACA
TGCGGGATGCTCTTCAGCTCGTCCTACCCGGTAGGCGCGTTCCTATTTCA
GGATTGACTGCTGGACGTTCTCCGGTGTGGAAGCCATCGAGAGCGCCTTA
TGGCTGAGTACCGGGAAGTTGTTCACCCTCTCGGAGCAAGAGTTCGTCTC
CTGCACCTCCAACCCCGAGCACTGCGGCGGCACAGGTGGCTGCTTCGGCG
CCACCCAGGACATCCTCTACGAGTACGTGCTGGCCCACGGCTTCACGCTG
GAGCGGGACTACCCCTACGTCTCTGGTAATGGAAGCGAGCCCATGTGTCT
CAATCAGCCCCTGCACGTGGGCTCTATCGCCGGCTACGTGGACTTGCCCC
CCAACGACCTGGCGGCCCATCTCCTCGCAGTGAACAGCCAGCCATTGGCC
ATCTCCTTGGACGCCTCTGACTTCCACAACTACCACTCGGGCGTCTTGAC
TTTCCAGATGTATGCCTCAGGCCTTCGCATTGCTGCGGTAGCCAAAGTGG
TGATCGTGCTGACAAACCTTGCGTTCGCCCTGTCAGGCCGCGAAGGGAAA
GCTCACCTTCGGCATTCCTCTCCTGCCTCCCGGCTCTCTTTGGATCTGGA
ACCCCACCACCGATACACCTTTGAGGAATTCGTCCGAGACTTCGGCAAGG
AGTATGTCCCTGGCTCGACGGAGTATCAGCGGCGTGAGACCATCTTTGCA
GATCGCTTGCGTGTGGTACAAGAGCATAATGCCGCGAATAGCCGTCGTGG
GACGACGTTCCGGAAAGGTGTCAACCAGTACTCCGATTGGACGGACGCCG
AGCTCCGAGGCCTGCTAGGCTTTAAACCCTCAGCCCAATGGCACGTCAAG
CGTCAACCTCGCTTGGAGGTGTTGTCGGCGGCTATGGAATCTAGCCACAG
CAACTCCTCTGGGGCTTTCTCTCGACAGGAGCGCCTTCTGACAAACCTAC
CCTCCCACGTAGACTGGCGTGAGAAGGGCGCGGTCACGAAACCAAAGAAC
CAAGGGGCGTGCGGATC back to top
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