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Properties
| Property Name | Value |
|---|
| Product | glycoprotein fp21 |
| Orig transcript id | gnl|cribi|Naga_100005g56.6697.mrna |
| Orig protein id | gnl|cribi|Naga_100005g56.6697 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:568825..570407 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5267 ID=rna5267|Name=rna5267|organism=Nannochloropsis gaditana|type=mRNA|length=1350bp
ATGGGCCGCAGTTTGGAAGGGTTGCCGCGTCTGAGGAGGAAGGCCACTGT
AGGTTCTCGCTTACCATCAGTCGAGATGCCAGCAGATAGTGCCTCCGTAT
CTTCAGAGCCCTCAAGCTTGTTGTCTATCGTAGATCGAACGGCCTACGAT
CGTCTTATCAAGTCAATCGCAGATGCGCTTCCGGAATCTACACGGTCACA
GTTTCGAGATGAAGCAAAAGAATGCACAGACTACGCTAGGGCACGAAAGT
TGATAGAGTTGATACTGGCCCAAAGTGCGGTGATCATGGCTCGGCCAACA
GAGAAGGACATCGAGGGCTCGTACCAGGTATTGATATCGTTGTTGGATCG
CTTGTCGGATCCGGAAGACCTCCCGATTATGGTCGATAAGATCCTCTCTA
ACTTACGCGCGTCTGTGGAGGATAAACCCAGTCTCAGGTTGAAGCTCCTT
TGCAACTTCTACAATCTCTTGAAATCGGGCACATCTGAGCGCTTTCAAGT
TCTTCTAGTCATCATCGAGTATGCTCGTGACACGAAACAGCTTGATATAT
TGTCAGATTTTTTTGCCGATTTGGAAAACTGGAAAAAAAATTGGCGGCAT
CTCTCTGCGGAGGACGAGCGACAATTGTACCTGCTTGTGTCGGAAACCTT
GGCTGGCTCTGGGAAGGTAGCTGAAGCTCAGCTCTTTCTCATTAAGTACC
TGGCAACTTTCCGGGAGACGGATCCCGGTCTTGATACGCCGGTAACAGTT
GCGCTCGCGGTCAAGGGCGTGATTGGAGCCGTCAGAGAGCCCCTGAACGC
GCTCAGGTCAGCGTCTGACCTGTTGAGCTTGCCGGCCGTCAAGCGCCTGG
CCTCTGATCCGGCGCACAAAGCTGTGCATGAGCTTCTGGAGATTTTTTGT
TTTGGCAAGCTTGCAGATTTGACGGAATATGAAGACCGGAATCCGGGTGT
CTTGGAAGCAAATGGAGTGGGTCGAGAGAAAGCGTTTCGTGACATGCGCC
TCCTTTCCCTCAGCCTGCTGGCCGCAGAGTACGAAGAAATTCCTTACGAG
GCCGTCTCAGCGACATTGCAGGTGCCTCATGAAGATGTGGAAAGTTGGGT
AGTAGAGGCTATCACCGCGCGCCTTTTGGAGGCGAAAATGGACCAGGAGC
AAGAGGTAGTGATGGTCACCCGCGCCTCGCACAGGCATTTTTCTCATCAA
AATTGGCTTAGACTCCAGGAAAAACTCCACGTTTGGCGACAGAATGTCAG
CAGCCTTCTTGTTTCACTCAGGGAGAAGAAAGGAGCGCGTACTCAGGCCT
CGCGAGTTCAAGAGAGCCAACAGTATGTACGCTCCTCTCATTCCAACTAG back to topprotein sequence of rna5267 >rna5267-protein ID=rna5267-protein|Name=rna5267|organism=Nannochloropsis gaditana|type=polypeptide|length=319bp
MKDDHVLECAYQSDQPRRRLLAGTESQQCFQSCRLESIRKPFLDFRGSMG
DKAKGAESGKVVHLVSQEGDQYEVEVSVCKMSELVKTMLPDDDDSSETQE
IPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSANMHEVVQDWYANFV
NVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITN
DFTPEEEAQVREENKWCEVRGVKATAMARTRTSGVLYFVQSVKPPNKEGL
LCTESIVCPSRTTDKFCRRVCVLIDAGEPGQRERNVGRESRIQARGKGNE
RTKSFTTVTAVLSVETYSS back to topmRNA from alignment at CM002465.1:568825..570407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5267 ID=rna5267|Name=rna5267|organism=Nannochloropsis gaditana|type=mRNA|length=1583bp|location=Sequence derived from alignment at CM002465.1:568825..570407- (Nannochloropsis gaditana)
ATGAAAGACGACCATGTTCTCGAGTGTGCTTACCAATCCGATCAGCCTCG
TAGGCGTCTATTAGCAGGGACAGAATCACAACAGTGCTTTCAATCATGTC
GCCTGGAAAGCATTGTAGGAAACCGCTTTTCGTTTCCCGCCGAGAATCCT
CGTTTTCCTCTAATTTCTCTTGGACTCCCGCGGGCTCATCCCGTTACCTA
ACTTTTCTTTTCATCTCATCATTGGATGTAGCGCAAACCTTTCTTGGACT
TCAGAGGTAGTATGGGTGACAAAGCGAAGGGAGCAGAATCCGGGAAAGTG
GTACATTTAGTGAGCCAGGAGGGAGACCAGTACGAGGTTGAGGTCTCAGT
CTGCAAAATGAGTGAACTGGTGAAAACAATGCTTCCAGATGGTAAGTAAA
TGATATTTTCAGAAAATGGATCAGGAGCTACACAAAGGGAGGTAGGGAAA
CGTTGGCGAGCACATTGTCGGTGAATTTGTGACATGAGACGCTTCGAGTT
TTTTAAGGCCCTAAGCTGGGGTTCCTAACGTTTGCATTTTGATGACTTAA
AGCAAAATAACTGCCCTACACTGAAACGCATGTCCTCTCCTTTCCCAGAC
GATGACAGCAGCGAAACACAGGAAATTCCTCTCCCTAATGTCAAGAACAA
CGTGCTTGCGAAAGTGATTGAATTTTGCAAACACCACAAGGAGGACCCCA
TGAACGACATTGAGAAGGTGATGGGTAGAGTTCGATATGGGCAGGTTTCC
GAGGTCGCGTAGTAATCTGACGCTTTCATTTTCCGCTGGCATACATAGCC
TCTGAAAAGTGCGAACATGCACGAAGTGGTGCAAGACTGGTACGCAAACT
TCGTCAACGTGGATCAGGAGCTTCTCTTCGAACTGATTCTGGCAGCGAAC
TACATGGACATTAAGCCACTACTAGATCTCACATGTGCTACGGTGGCTAG
CATGATAAAGGGGAAGACACCGGAGGAAATCCGCCGCACCTTTAATATCA
CCAACGACTTCACTCCGGAAGAGGAGGCGCAAGTCAGGGAGGAGAACAAG
TGGTGTGAGGTACGTGTCGCGGACTAAGCGCTTGGGAGACCCTGCGGCTT
GTTCTCTAGCTTGTCATATCTATTCCGCGTCGAAAGGTCAAGACATCCAA
TTCGAATGATTCCGTAAGATAGTGACCGATGCCGTGATCGTCCTGCCTGC
GCCCTTCACTCACGCGTCTCGCACCACTCGTAGGAGGTGTGAAGGCGACA
GCGATGGCGAGGACAAGAACGTCAGGAGTGCTGTACTTTGTTCAAAGCGT
GAAAGTGGGATCCTAAACCAGGAATGGAGGTATAGTGAATGCTCGATGAC
AGCCCCCGAATAAGGAGGGACTGTTGTGTACGGAGTCCATCGTCTGCCCC
TCTCGTACGACTGACAAGTTTTGCCGAAGGGTTTGTGTCTTGATAGACGC
TGGAGAACCGGGGCAAAGAGAGAGGAACGTCGGTCGAGAAAGTAGGATAC
AAGCACGTGGCAAAGGAAACGAAAGGACGAAAAGCTTCACAACTGTCACC
GCCGTGCTCTCCGTTGAGACGTATTCTTCATGA back to topCoding sequence (CDS) from alignment at CM002465.1:568825..570407- >rna5267 ID=rna5267|Name=rna5267|organism=Nannochloropsis gaditana|type=CDS|length=5760bp|location=Sequence derived from alignment at CM002465.1:568825..570407- (Nannochloropsis gaditana)
CCCCCGAATAAGGAGGGACTGTTGTGTACGGAGTCCATCGTCTGCCCCTC
TCGTACGACTGACAAGTTTTGCCGAAGGGTTTGTGTCTTGATAGACGCTG
GAGAACCGGGGCAAAGAGAGAGGAACGTCGGTCGAGAAAGTAGGATACAA
GCACGTGGCAAAGGAAACGAAAGGACGAAAAGCTTCACAACTGTCACCGC
CGTGCTCTCCGTTGAGACGTATTCTTCATGAGAGGTGTGAAGGCGACAGC
GATGGCGAGGACAAGAACGTCAGGAGTGCTGTACTTTGTTCAAAGCGTGA
AACCTCTGAAAAGTGCGAACATGCACGAAGTGGTGCAAGACTGGTACGCA
AACTTCGTCAACGTGGATCAGGAGCTTCTCTTCGAACTGATTCTGGCAGC
GAACTACATGGACATTAAGCCACTACTAGATCTCACATGTGCTACGGTGG
CTAGCATGATAAAGGGGAAGACACCGGAGGAAATCCGCCGCACCTTTAAT
ATCACCAACGACTTCACTCCGGAAGAGGAGGCGCAAGTCAGGGAGGAGAA
CAAGTGGTGTGAGGTACACGATGACAGCAGCGAAACACAGGAAATTCCTC
TCCCTAATGTCAAGAACAACGTGCTTGCGAAAGTGATTGAATTTTGCAAA
CACCACAAGGAGGACCCCATGAACGACATTGAGAAGCGCAAACCTTTCTT
GGACTTCAGAGGTAGTATGGGTGACAAAGCGAAGGGAGCAGAATCCGGGA
AAGTGGTACATTTAGTGAGCCAGGAGGGAGACCAGTACGAGGTTGAGGTC
TCAGTCTGCAAAATGAGTGAACTGGTGAAAACAATGCTTCCAGATGATGA
AAGACGACCATGTTCTCGAGTGTGCTTACCAATCCGATCAGCCTCGTAGG
CGTCTATTAGCAGGGACAGAATCACAACAGTGCTTTCAATCATGTCGCCT
GGAAAGCATTCCCCCGAATAAGGAGGGACTGTTGTGTACGGAGTCCATCG
TCTGCCCCTCTCGTACGACTGACAAGTTTTGCCGAAGGGTTTGTGTCTTG
ATAGACGCTGGAGAACCGGGGCAAAGAGAGAGGAACGTCGGTCGAGAAAG
TAGGATACAAGCACGTGGCAAAGGAAACGAAAGGACGAAAAGCTTCACAA
CTGTCACCGCCGTGCTCTCCGTTGAGACGTATTCTTCATGAGAGGTGTGA
AGGCGACAGCGATGGCGAGGACAAGAACGTCAGGAGTGCTGTACTTTGTT
CAAAGCGTGAAACCTCTGAAAAGTGCGAACATGCACGAAGTGGTGCAAGA
CTGGTACGCAAACTTCGTCAACGTGGATCAGGAGCTTCTCTTCGAACTGA
TTCTGGCAGCGAACTACATGGACATTAAGCCACTACTAGATCTCACATGT
GCTACGGTGGCTAGCATGATAAAGGGGAAGACACCGGAGGAAATCCGCCG
CACCTTTAATATCACCAACGACTTCACTCCGGAAGAGGAGGCGCAAGTCA
GGGAGGAGAACAAGTGGTGTGAGGTACACGATGACAGCAGCGAAACACAG
GAAATTCCTCTCCCTAATGTCAAGAACAACGTGCTTGCGAAAGTGATTGA
ATTTTGCAAACACCACAAGGAGGACCCCATGAACGACATTGAGAAGCGCA
AACCTTTCTTGGACTTCAGAGGTAGTATGGGTGACAAAGCGAAGGGAGCA
GAATCCGGGAAAGTGGTACATTTAGTGAGCCAGGAGGGAGACCAGTACGA
GGTTGAGGTCTCAGTCTGCAAAATGAGTGAACTGGTGAAAACAATGCTTC
CAGATGATGAAAGACGACCATGTTCTCGAGTGTGCTTACCAATCCGATCA
GCCTCGTAGGCGTCTATTAGCAGGGACAGAATCACAACAGTGCTTTCAAT
CATGTCGCCTGGAAAGCATTCCCCCGAATAAGGAGGGACTGTTGTGTACG
GAGTCCATCGTCTGCCCCTCTCGTACGACTGACAAGTTTTGCCGAAGGGT
TTGTGTCTTGATAGACGCTGGAGAACCGGGGCAAAGAGAGAGGAACGTCG
GTCGAGAAAGTAGGATACAAGCACGTGGCAAAGGAAACGAAAGGACGAAA
AGCTTCACAACTGTCACCGCCGTGCTCTCCGTTGAGACGTATTCTTCATG
AGAGGTGTGAAGGCGACAGCGATGGCGAGGACAAGAACGTCAGGAGTGCT
GTACTTTGTTCAAAGCGTGAAACCTCTGAAAAGTGCGAACATGCACGAAG
TGGTGCAAGACTGGTACGCAAACTTCGTCAACGTGGATCAGGAGCTTCTC
TTCGAACTGATTCTGGCAGCGAACTACATGGACATTAAGCCACTACTAGA
TCTCACATGTGCTACGGTGGCTAGCATGATAAAGGGGAAGACACCGGAGG
AAATCCGCCGCACCTTTAATATCACCAACGACTTCACTCCGGAAGAGGAG
GCGCAAGTCAGGGAGGAGAACAAGTGGTGTGAGGTACACGATGACAGCAG
CGAAACACAGGAAATTCCTCTCCCTAATGTCAAGAACAACGTGCTTGCGA
AAGTGATTGAATTTTGCAAACACCACAAGGAGGACCCCATGAACGACATT
GAGAAGCGCAAACCTTTCTTGGACTTCAGAGGTAGTATGGGTGACAAAGC
GAAGGGAGCAGAATCCGGGAAAGTGGTACATTTAGTGAGCCAGGAGGGAG
ACCAGTACGAGGTTGAGGTCTCAGTCTGCAAAATGAGTGAACTGGTGAAA
ACAATGCTTCCAGATGATGAAAGACGACCATGTTCTCGAGTGTGCTTACC
AATCCGATCAGCCTCGTAGGCGTCTATTAGCAGGGACAGAATCACAACAG
TGCTTTCAATCATGTCGCCTGGAAAGCATTCCCCCGAATAAGGAGGGACT
GTTGTGTACGGAGTCCATCGTCTGCCCCTCTCGTACGACTGACAAGTTTT
GCCGAAGGGTTTGTGTCTTGATAGACGCTGGAGAACCGGGGCAAAGAGAG
AGGAACGTCGGTCGAGAAAGTAGGATACAAGCACGTGGCAAAGGAAACGA
AAGGACGAAAAGCTTCACAACTGTCACCGCCGTGCTCTCCGTTGAGACGT
ATTCTTCATGAGAGGTGTGAAGGCGACAGCGATGGCGAGGACAAGAACGT
CAGGAGTGCTGTACTTTGTTCAAAGCGTGAAACCTCTGAAAAGTGCGAAC
ATGCACGAAGTGGTGCAAGACTGGTACGCAAACTTCGTCAACGTGGATCA
GGAGCTTCTCTTCGAACTGATTCTGGCAGCGAACTACATGGACATTAAGC
CACTACTAGATCTCACATGTGCTACGGTGGCTAGCATGATAAAGGGGAAG
ACACCGGAGGAAATCCGCCGCACCTTTAATATCACCAACGACTTCACTCC
GGAAGAGGAGGCGCAAGTCAGGGAGGAGAACAAGTGGTGTGAGGTACACG
ATGACAGCAGCGAAACACAGGAAATTCCTCTCCCTAATGTCAAGAACAAC
GTGCTTGCGAAAGTGATTGAATTTTGCAAACACCACAAGGAGGACCCCAT
GAACGACATTGAGAAGCGCAAACCTTTCTTGGACTTCAGAGGTAGTATGG
GTGACAAAGCGAAGGGAGCAGAATCCGGGAAAGTGGTACATTTAGTGAGC
CAGGAGGGAGACCAGTACGAGGTTGAGGTCTCAGTCTGCAAAATGAGTGA
ACTGGTGAAAACAATGCTTCCAGATGATGAAAGACGACCATGTTCTCGAG
TGTGCTTACCAATCCGATCAGCCTCGTAGGCGTCTATTAGCAGGGACAGA
ATCACAACAGTGCTTTCAATCATGTCGCCTGGAAAGCATTCCCCCGAATA
AGGAGGGACTGTTGTGTACGGAGTCCATCGTCTGCCCCTCTCGTACGACT
GACAAGTTTTGCCGAAGGGTTTGTGTCTTGATAGACGCTGGAGAACCGGG
GCAAAGAGAGAGGAACGTCGGTCGAGAAAGTAGGATACAAGCACGTGGCA
AAGGAAACGAAAGGACGAAAAGCTTCACAACTGTCACCGCCGTGCTCTCC
GTTGAGACGTATTCTTCATGAGAGGTGTGAAGGCGACAGCGATGGCGAGG
ACAAGAACGTCAGGAGTGCTGTACTTTGTTCAAAGCGTGAAACCTCTGAA
AAGTGCGAACATGCACGAAGTGGTGCAAGACTGGTACGCAAACTTCGTCA
ACGTGGATCAGGAGCTTCTCTTCGAACTGATTCTGGCAGCGAACTACATG
GACATTAAGCCACTACTAGATCTCACATGTGCTACGGTGGCTAGCATGAT
AAAGGGGAAGACACCGGAGGAAATCCGCCGCACCTTTAATATCACCAACG
ACTTCACTCCGGAAGAGGAGGCGCAAGTCAGGGAGGAGAACAAGTGGTGT
GAGGTACACGATGACAGCAGCGAAACACAGGAAATTCCTCTCCCTAATGT
CAAGAACAACGTGCTTGCGAAAGTGATTGAATTTTGCAAACACCACAAGG
AGGACCCCATGAACGACATTGAGAAGCGCAAACCTTTCTTGGACTTCAGA
GGTAGTATGGGTGACAAAGCGAAGGGAGCAGAATCCGGGAAAGTGGTACA
TTTAGTGAGCCAGGAGGGAGACCAGTACGAGGTTGAGGTCTCAGTCTGCA
AAATGAGTGAACTGGTGAAAACAATGCTTCCAGATGATGAAAGACGACCA
TGTTCTCGAGTGTGCTTACCAATCCGATCAGCCTCGTAGGCGTCTATTAG
CAGGGACAGAATCACAACAGTGCTTTCAATCATGTCGCCTGGAAAGCATT
CCCCCGAATAAGGAGGGACTGTTGTGTACGGAGTCCATCGTCTGCCCCTC
TCGTACGACTGACAAGTTTTGCCGAAGGGTTTGTGTCTTGATAGACGCTG
GAGAACCGGGGCAAAGAGAGAGGAACGTCGGTCGAGAAAGTAGGATACAA
GCACGTGGCAAAGGAAACGAAAGGACGAAAAGCTTCACAACTGTCACCGC
CGTGCTCTCCGTTGAGACGTATTCTTCATGAGAGGTGTGAAGGCGACAGC
GATGGCGAGGACAAGAACGTCAGGAGTGCTGTACTTTGTTCAAAGCGTGA
AACCTCTGAAAAGTGCGAACATGCACGAAGTGGTGCAAGACTGGTACGCA
AACTTCGTCAACGTGGATCAGGAGCTTCTCTTCGAACTGATTCTGGCAGC
GAACTACATGGACATTAAGCCACTACTAGATCTCACATGTGCTACGGTGG
CTAGCATGATAAAGGGGAAGACACCGGAGGAAATCCGCCGCACCTTTAAT
ATCACCAACGACTTCACTCCGGAAGAGGAGGCGCAAGTCAGGGAGGAGAA
CAAGTGGTGTGAGGTACACGATGACAGCAGCGAAACACAGGAAATTCCTC
TCCCTAATGTCAAGAACAACGTGCTTGCGAAAGTGATTGAATTTTGCAAA
CACCACAAGGAGGACCCCATGAACGACATTGAGAAGCGCAAACCTTTCTT
GGACTTCAGAGGTAGTATGGGTGACAAAGCGAAGGGAGCAGAATCCGGGA
AAGTGGTACATTTAGTGAGCCAGGAGGGAGACCAGTACGAGGTTGAGGTC
TCAGTCTGCAAAATGAGTGAACTGGTGAAAACAATGCTTCCAGATGATGA
AAGACGACCATGTTCTCGAGTGTGCTTACCAATCCGATCAGCCTCGTAGG
CGTCTATTAGCAGGGACAGAATCACAACAGTGCTTTCAATCATGTCGCCT
GGAAAGCATT back to top
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