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Properties
| Property Name | Value |
|---|
| Product | threonine synthase |
| Orig transcript id | gnl|cribi|Naga_100005g33.6708.mrna |
| Orig protein id | gnl|cribi|Naga_100005g33.6708 |
| Gene | TS |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:523000..525370 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5246 ID=rna5246|Name=rna5246|organism=Nannochloropsis gaditana|type=mRNA|length=2013bp
ATGGTAACGTCATTGGGGAAGGAGGAGGAGGCGGAGTGCTTCCTAGACAT
CAAGCCGGACCACGACTTCTCGTACCACAATTTGCCGTATGGTGTCTTTT
CGACTGCTCACTCAGCGCCTCGAGTGGGCGTTGCAATCGGTGATTGGGTT
CTAGATTTATCGGTGCTCGCATCAGAGACAGACATCTTCAGTTTTGATGC
CAGCTGCTTCCATGAAGCAGCACTGAACGCATTTATGGCGCAGCCCCGAG
CTGTTTGGACGTCTGCACGTGCTGCAATTCGGCAGGTACTTTCAAAGGGA
GAGCCCCTGCTCCAAGAAGACGCTGCTTTGCGTGCGCGAACTCTTTTGCC
ATTCCACAACGTGAAAATGCATTTACCAGCGCGCATAGGAGACTACACGG
ACTTTTACTCATCGCGGGAGCATGCTACGAACGTAGGCATTATGTTCAGA
GGCAAAGAAAATGCCCTGCAGCCTAATTGGCTCCATCTCCCAGTAGGCTA
CCATGGGCGAGCTTCAAGCGTCGTCATCTCGGGCACTCCAGTTATTCGTC
CTCAAGGACAGCTACAGGCTGATTCTATAGATGATAAAAAAGGCTCAATA
TACGGCCCCTCGCGGCTGCTTGACTTCGAAATGGAGGTTGGGGCCTTCGT
CGGTGGTGCGCCTAACCCTCTTGGCCAGCCCCTTACCATGGCAGAGGCGG
ACGAGCACTTGTTCGGGTTGGTCCTAATGAATGACTGGAGCGCACGGGAC
ATCCAAAAATGGGAATACGTGCCGCTTGGTCCGTTCACAGCCAAGAACTT
CGCCACCTCCATTAGCCCGTGGGTGGTGACTCTGGACGCCCTCAGGCCCT
TCCTCTGCCCCACAAGCGCCTGCACTCAGGACAACCCCGTGCCGCTCCCG
TACCTCCGCGACCCGGACTACGCTTCCTATGACATTCACCTAGAGGTGTC
ATTGCAATCAGCTGGCCTGCCATTCCCTCACCCTATTTCTCGTTCAAATT
TCCGACACCTGTACTGGACGATCCGGCAGCAGCTGGTGCACCACAGCGTC
ACGGGCTGCAATCTCCGACCTGGCGACCTGTTGGGCAGCGGCACGATCAG
CGGGACCGATGACAGCTCGCTAGGCTCCCTTTTGGAGCTTAGCTGGAAAG
GCAGTCGAGAGGTGGAAGTGGGGGATGGGTCCACCAGGAAATTTCTGAGG
GACGGGGACTCCGTGGTCCTCCGCGGCTGGAGCCAAGGGAAAGATTTTCG
AGTGGGCTTCGGCGTCTGCGAAGGGCGTGTACTGCCCGCGGGAACCAAAG
TCTCGAGCCTGCTGGCGCCAGAAGGGCCCCCTGTAAGGTATGGAGGTCTT
CGTCTCCACGGCTACTGGCGCTCTTCCGCAACGTGGCGCGTCCGCATCGC
TCTAGAATGGAAGGGTTTAGAATATGAATATGTGCCCGTGCACCTAGTTG
AGGGCGAACAGAATTCTAGCGCGTATGCAGCCCTGAATCCCCTCGGGCAG
GTCCCAACGTTTGAAATTTGTGACTTGGCCACGGGCCGCAAGGTTGTTCT
GACACAAAGCTTAGCTATCATTGAATTTTTAGATGAGGCGTTCCCTGAGA
CAAAGCCCATGCTACCCAGAGGCGGGTCAGAGGCTCCATTGAAGCGGGCT
CAAGTGCGACGCGTGGCAGAGATCGTGAACTCTGGGATTCAGCCGTTACA
GAACTTGGCGACCATGAGCGACATAACTGCCAAGTCGGGAGGTGCCTTGG
ATGGCAAGGACTTTGGCCGAGACGCTATTGTCACGGGACTCGCGGCTTTG
GAAAGTATCGTGAAGGGTCTCGCGGGCAAGTACTGCGTAGGCAACCGCAT
TTCTTTGGCTGATGCCGCTTTGGTGCCCCAGCTTTACAATGCGAGGCGCT
TTGGAGTTGATCTGTCAGTATACCCGACACTCATTCGTGTCGAGAAGGAA
ATATCGGGCTTAGAGGCATTTAAGCGAGCCCATCCAGACGCGCAGACGGA
TGCTATCAAGTAG back to topprotein sequence of rna5246 >rna5246-protein ID=rna5246-protein|Name=rna5246|organism=Nannochloropsis gaditana|type=polypeptide|length=479bp
MAATARTRYCSTRGCVKNATFEDVVLGGLAPDRGLYVPEVLPTLTPVELQ
AMRCLTFPNLAYAIVSRFVGEEDIPAKDLKDIIDRSYSTFRSPDVSPVKQ
LGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGAEAFLTILGATS
GDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCIAVE
GTFDDCQNIVKAAFQDASFREEVRLGAVNSINWARVLAQITYYFWAYFRI
TDFDPSIEQLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHR
FFVTGEYHKAEVTQTHSPSMDISISSNFERYLYELADRDHTLLKKWMTNF
EATGELTLSGQLLKRARQDFISGRGDEEQTLATIRKWHEDHGYLLCPHSA
VGVHAADSLGMLRDGRTVCLATAHPAKFPEATERLGIESDLPAELAALAD
MPMRSILLHNDLVEVQSYVKSRIQSMDEQ back to topmRNA from alignment at CM002465.1:523000..525370- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5246 ID=rna5246|Name=rna5246|organism=Nannochloropsis gaditana|type=mRNA|length=2371bp|location=Sequence derived from alignment at CM002465.1:523000..525370- (Nannochloropsis gaditana)
CTTAGTCTGCGTGCTGAATGGTGATCGCGTACTGTGAGCGGCGATGGCGC
CCGAGCGACTGCTGAGCCGTGCTGGATGTGGTTCCCGTGCTGGTCCTGGG
GCGAGACCCCTCTACCCGTAAGACCTGCTTGACGTTTTTTTTTAAACGGT
ATCTTATCAGCTCACGAAAAACATCTCACGTGCTTTGTCAGGCTGTGGCC
CCTTTTATTCTCGAAGCTGCGAAGCAACGTTGGGGGAGGGTTGCTACTCC
TCAGCTCTAAGACAAGCCGTCTCTCTGTGAAGGAAGTTATTTGGGCAGAA
ATATCTGCTCGCTGCGATCATCCTTTCAATAATCTCATGGCGGCAACCGC
TCGCACACGTTATTGCTCTACCCGGGGGTGTGTAAAAAATGCCACTTTCG
AAGACGTGGTTCTGGGTGGACTTGCCCCAGACCGTGGATTATATGTTCCA
GAGGTGCTTCCCACGCTCACCCCTGTCGAGCTGCAAGCTATGCGATGCCT
GACCTTTCCAAATCTGGCCTATGCTATAGTTTCTCGCTTCGTTGGAGAAG
AAGATATTCCAGCAAAGGACTTAAAGGATATAATAGATCGGAGCTACTCG
ACTTTCAGGTCTCCCGACGTCTCGCCAGTAAAGCAACTGGGCTCAGCCTG
GATCCTCGAGCTCTTCCACGGGCCCACTTTCGCTTTCAAAGACGTGGCTT
TGCAGTTGCTGGGCAATCTTTTCGAGTATTTTCTGTCCAAGAGGTCGGGA
GCCGAGGCTTTCTTGACCATTTTGGGAGCCACGTCCGGCGACACGGGGTC
AGCAGCCATCTACGGGCTGCGCGGAAAAGCGAATGTCCGTTGCTTTATCC
TTTACCCCAAGGGCCGAACGTCTGCCATTCAAGAGAGGCAAATGACAACT
GTACCAGATAAGAACGTCCAATGCATTGCCGTGGAGGGAACGTTCGATGA
TTGCCAAAATATAGTCAAGGCCGCGTTTCAAGATGCCAGCTTCCGCGAGG
AGGTCCGCCTGGGCGCTGTCAATTCTATCAATTGGGCGCGCGTCCTTGCA
CAGATAACCTACTACTTCTGGGCATATTTCCGTATCACAGATTTCGACCC
CTCCATAGAACAGGTAAAGATATGAGAAAGAAAAAGGGGGAGGTCAGACT
GGAGCGTGAGAGAGAAATGATCCTTTATTAACTTACAGACGACGTCTTTC
ATTTTAGTTGAGCTTCTCCGTTCCGACGGGTAACTTTGGTGACGTGTTGG
CTGGTTACTACGCCAAACGAATGGGGCTGCCGGTGGAGCAGTTGCTCGTG
GCCACGAACGTGAACGACATCCTGCACCGATTCTTCGTGACGGGAGAGTA
TCACAAAGCCGAAGTGACGCAGACCCATTCACCATCCATGGATATATCAA
TTTCAAGCAACTTTGAGCGCTACTTATATGAGCTGGCAGATCGCGATCAC
ACCTTGCTCAAGAAATGGATGACCAACTTCGAAGCCACAGGCGAGCTCAC
CCTTTCCGGACAGCTGCTCAAGAGGGCCCGGCAGGATTTTATTTCGGGCC
GAGGGGACGAGGAACAGGTGTGTATTGAGGGGACGAAAAGCAGGTGTGTG
GCATTCATCAAGGGGGAAAGCAGATGATACACTCCGCACCAGACAATGTG
ACTGAGATTCTCTACCAACCTGTGCCCTAGACGCTCGCCACAATAAGGAA
ATGGCACGAAGACCACGGCTACCTCCTCTGCCCTCACTCTGCTGTGGGCG
TGCATGCGGCGGATTCGCTGGGTATGCTCAGGGATGGGCGGACAGTATGC
CTTGCCACTGCTCATCCAGCCAAGTTTCCGGAGGCCACAGAGCGCCTGGG
CATCGAAAGCGATTTGCCCGCGGAGCTGGCGGCATTGGCGGACATGCCCA
TGCGCTCTATCCTCTTGCACAACGATTTAGTTGAGGTACAGTCTTACGTG
AAATCGCGCATTCAATCGATGGACGAACAATGAGTCAAAAAAAATACAGG
ATCCGGAAGGAGGCACGACTTTGAAATTCTGGGTAATTAGGTGTGTTCTT
CTGGTAAATAACGACATGAACAGCGGAACGTAAAGACCGCGATCTTAAAA
GAATGCTAGGAAGCACAAGGATACCTTGAAGGGCTTCAAATTCTGAATGG
ATTTTGAAGTGCATATGACTGCTTGGGATCCACAGTACCGAAGTTCAAAA
TGGAGTCAATTTGAAGTTGACCTACGCAATACTCGTAGATATGAACGTTC
CACATTTTTTGCATGAGATGTTCCGCTTCATCGAAAATCGGTCCGCTGTG
TACACGATTCATGGTTTACGTTCATTGAACTCTTCCACCCCATGCTCTGA
AGTCGCATACCGAAATCACAG back to topCoding sequence (CDS) from alignment at CM002465.1:523000..525370- >rna5246 ID=rna5246|Name=rna5246|organism=Nannochloropsis gaditana|type=CDS|length=4320bp|location=Sequence derived from alignment at CM002465.1:523000..525370- (Nannochloropsis gaditana)
ACGCTCGCCACAATAAGGAAATGGCACGAAGACCACGGCTACCTCCTCTG
CCCTCACTCTGCTGTGGGCGTGCATGCGGCGGATTCGCTGGGTATGCTCA
GGGATGGGCGGACAGTATGCCTTGCCACTGCTCATCCAGCCAAGTTTCCG
GAGGCCACAGAGCGCCTGGGCATCGAAAGCGATTTGCCCGCGGAGCTGGC
GGCATTGGCGGACATGCCCATGCGCTCTATCCTCTTGCACAACGATTTAG
TTGAGGTACAGTCTTACGTGAAATCGCGCATTCAATCGATGGACGAACAA
TGATTGAGCTTCTCCGTTCCGACGGGTAACTTTGGTGACGTGTTGGCTGG
TTACTACGCCAAACGAATGGGGCTGCCGGTGGAGCAGTTGCTCGTGGCCA
CGAACGTGAACGACATCCTGCACCGATTCTTCGTGACGGGAGAGTATCAC
AAAGCCGAAGTGACGCAGACCCATTCACCATCCATGGATATATCAATTTC
AAGCAACTTTGAGCGCTACTTATATGAGCTGGCAGATCGCGATCACACCT
TGCTCAAGAAATGGATGACCAACTTCGAAGCCACAGGCGAGCTCACCCTT
TCCGGACAGCTGCTCAAGAGGGCCCGGCAGGATTTTATTTCGGGCCGAGG
GGACGAGGAACAGATGGCGGCAACCGCTCGCACACGTTATTGCTCTACCC
GGGGGTGTGTAAAAAATGCCACTTTCGAAGACGTGGTTCTGGGTGGACTT
GCCCCAGACCGTGGATTATATGTTCCAGAGGTGCTTCCCACGCTCACCCC
TGTCGAGCTGCAAGCTATGCGATGCCTGACCTTTCCAAATCTGGCCTATG
CTATAGTTTCTCGCTTCGTTGGAGAAGAAGATATTCCAGCAAAGGACTTA
AAGGATATAATAGATCGGAGCTACTCGACTTTCAGGTCTCCCGACGTCTC
GCCAGTAAAGCAACTGGGCTCAGCCTGGATCCTCGAGCTCTTCCACGGGC
CCACTTTCGCTTTCAAAGACGTGGCTTTGCAGTTGCTGGGCAATCTTTTC
GAGTATTTTCTGTCCAAGAGGTCGGGAGCCGAGGCTTTCTTGACCATTTT
GGGAGCCACGTCCGGCGACACGGGGTCAGCAGCCATCTACGGGCTGCGCG
GAAAAGCGAATGTCCGTTGCTTTATCCTTTACCCCAAGGGCCGAACGTCT
GCCATTCAAGAGAGGCAAATGACAACTGTACCAGATAAGAACGTCCAATG
CATTGCCGTGGAGGGAACGTTCGATGATTGCCAAAATATAGTCAAGGCCG
CGTTTCAAGATGCCAGCTTCCGCGAGGAGGTCCGCCTGGGCGCTGTCAAT
TCTATCAATTGGGCGCGCGTCCTTGCACAGATAACCTACTACTTCTGGGC
ATATTTCCGTATCACAGATTTCGACCCCTCCATAGAACAGACGCTCGCCA
CAATAAGGAAATGGCACGAAGACCACGGCTACCTCCTCTGCCCTCACTCT
GCTGTGGGCGTGCATGCGGCGGATTCGCTGGGTATGCTCAGGGATGGGCG
GACAGTATGCCTTGCCACTGCTCATCCAGCCAAGTTTCCGGAGGCCACAG
AGCGCCTGGGCATCGAAAGCGATTTGCCCGCGGAGCTGGCGGCATTGGCG
GACATGCCCATGCGCTCTATCCTCTTGCACAACGATTTAGTTGAGGTACA
GTCTTACGTGAAATCGCGCATTCAATCGATGGACGAACAATGATTGAGCT
TCTCCGTTCCGACGGGTAACTTTGGTGACGTGTTGGCTGGTTACTACGCC
AAACGAATGGGGCTGCCGGTGGAGCAGTTGCTCGTGGCCACGAACGTGAA
CGACATCCTGCACCGATTCTTCGTGACGGGAGAGTATCACAAAGCCGAAG
TGACGCAGACCCATTCACCATCCATGGATATATCAATTTCAAGCAACTTT
GAGCGCTACTTATATGAGCTGGCAGATCGCGATCACACCTTGCTCAAGAA
ATGGATGACCAACTTCGAAGCCACAGGCGAGCTCACCCTTTCCGGACAGC
TGCTCAAGAGGGCCCGGCAGGATTTTATTTCGGGCCGAGGGGACGAGGAA
CAGATGGCGGCAACCGCTCGCACACGTTATTGCTCTACCCGGGGGTGTGT
AAAAAATGCCACTTTCGAAGACGTGGTTCTGGGTGGACTTGCCCCAGACC
GTGGATTATATGTTCCAGAGGTGCTTCCCACGCTCACCCCTGTCGAGCTG
CAAGCTATGCGATGCCTGACCTTTCCAAATCTGGCCTATGCTATAGTTTC
TCGCTTCGTTGGAGAAGAAGATATTCCAGCAAAGGACTTAAAGGATATAA
TAGATCGGAGCTACTCGACTTTCAGGTCTCCCGACGTCTCGCCAGTAAAG
CAACTGGGCTCAGCCTGGATCCTCGAGCTCTTCCACGGGCCCACTTTCGC
TTTCAAAGACGTGGCTTTGCAGTTGCTGGGCAATCTTTTCGAGTATTTTC
TGTCCAAGAGGTCGGGAGCCGAGGCTTTCTTGACCATTTTGGGAGCCACG
TCCGGCGACACGGGGTCAGCAGCCATCTACGGGCTGCGCGGAAAAGCGAA
TGTCCGTTGCTTTATCCTTTACCCCAAGGGCCGAACGTCTGCCATTCAAG
AGAGGCAAATGACAACTGTACCAGATAAGAACGTCCAATGCATTGCCGTG
GAGGGAACGTTCGATGATTGCCAAAATATAGTCAAGGCCGCGTTTCAAGA
TGCCAGCTTCCGCGAGGAGGTCCGCCTGGGCGCTGTCAATTCTATCAATT
GGGCGCGCGTCCTTGCACAGATAACCTACTACTTCTGGGCATATTTCCGT
ATCACAGATTTCGACCCCTCCATAGAACAGACGCTCGCCACAATAAGGAA
ATGGCACGAAGACCACGGCTACCTCCTCTGCCCTCACTCTGCTGTGGGCG
TGCATGCGGCGGATTCGCTGGGTATGCTCAGGGATGGGCGGACAGTATGC
CTTGCCACTGCTCATCCAGCCAAGTTTCCGGAGGCCACAGAGCGCCTGGG
CATCGAAAGCGATTTGCCCGCGGAGCTGGCGGCATTGGCGGACATGCCCA
TGCGCTCTATCCTCTTGCACAACGATTTAGTTGAGGTACAGTCTTACGTG
AAATCGCGCATTCAATCGATGGACGAACAATGATTGAGCTTCTCCGTTCC
GACGGGTAACTTTGGTGACGTGTTGGCTGGTTACTACGCCAAACGAATGG
GGCTGCCGGTGGAGCAGTTGCTCGTGGCCACGAACGTGAACGACATCCTG
CACCGATTCTTCGTGACGGGAGAGTATCACAAAGCCGAAGTGACGCAGAC
CCATTCACCATCCATGGATATATCAATTTCAAGCAACTTTGAGCGCTACT
TATATGAGCTGGCAGATCGCGATCACACCTTGCTCAAGAAATGGATGACC
AACTTCGAAGCCACAGGCGAGCTCACCCTTTCCGGACAGCTGCTCAAGAG
GGCCCGGCAGGATTTTATTTCGGGCCGAGGGGACGAGGAACAGATGGCGG
CAACCGCTCGCACACGTTATTGCTCTACCCGGGGGTGTGTAAAAAATGCC
ACTTTCGAAGACGTGGTTCTGGGTGGACTTGCCCCAGACCGTGGATTATA
TGTTCCAGAGGTGCTTCCCACGCTCACCCCTGTCGAGCTGCAAGCTATGC
GATGCCTGACCTTTCCAAATCTGGCCTATGCTATAGTTTCTCGCTTCGTT
GGAGAAGAAGATATTCCAGCAAAGGACTTAAAGGATATAATAGATCGGAG
CTACTCGACTTTCAGGTCTCCCGACGTCTCGCCAGTAAAGCAACTGGGCT
CAGCCTGGATCCTCGAGCTCTTCCACGGGCCCACTTTCGCTTTCAAAGAC
GTGGCTTTGCAGTTGCTGGGCAATCTTTTCGAGTATTTTCTGTCCAAGAG
GTCGGGAGCCGAGGCTTTCTTGACCATTTTGGGAGCCACGTCCGGCGACA
CGGGGTCAGCAGCCATCTACGGGCTGCGCGGAAAAGCGAATGTCCGTTGC
TTTATCCTTTACCCCAAGGGCCGAACGTCTGCCATTCAAGAGAGGCAAAT
GACAACTGTACCAGATAAGAACGTCCAATGCATTGCCGTGGAGGGAACGT
TCGATGATTGCCAAAATATAGTCAAGGCCGCGTTTCAAGATGCCAGCTTC
CGCGAGGAGGTCCGCCTGGGCGCTGTCAATTCTATCAATTGGGCGCGCGT
CCTTGCACAGATAACCTACTACTTCTGGGCATATTTCCGTATCACAGATT
TCGACCCCTCCATAGAACAG back to top
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