|
|
Properties
| Property Name | Value |
|---|
| Product | fatty acid desaturase domain protein |
| Orig transcript id | gnl|cribi|Naga_100115g11.6581.mrna |
| Orig protein id | gnl|cribi|Naga_100115g11.6581 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1312281..1314141 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna523 ID=rna523|Name=rna523|organism=Nannochloropsis gaditana|type=mRNA|length=408bp
ATGTGTAAGTGCAAAACAATAGGATGTGACACCAAGCGGTATAGAGGTGG
CCGTGGACTGGCGGGGGGCAGAAGGGGAGAAGCCATGCCCAGGTACTTGG
TGTCCAGTGCGCAGAAGACATCGCTTGACGGTTCTCCATTCCTTGGAAGA
CAGCACATCCAAGTACATTGTAGTGTTTTTTTAATTTCTGGACGCCAACT
CGGCCGTCGTTACGTGCGCACACACGGAAAAGCTTCTTCGAATAGAATCC
ATGTGTTTTGTAAGAATGATTGGTATGAAGGGACATGCGCTCTCTACGTG
GCTGTTCTGTGCGGAGGCCAAGACCTTCACACGTGCCCACGACCGGCACT
GGCATGCACGGCAGGGCGAGACATACTCAATCTGAAGAATGAACAACGAG
ATACATGA back to topprotein sequence of rna523 >rna523-protein ID=rna523-protein|Name=rna523|organism=Nannochloropsis gaditana|type=polypeptide|length=504bp
MELRCSIRHVVDGDLPFVALPPGSSVANCLKGHPTLWMPRDIARVCLLYV
VSYHVMNPDGEVCHSLHEPPPASHNRIALSLLTPFPDDDGSPRYPASSTI
DRTSSSATATGDIPRTASISHLSQEAAKVKIIREAIRAEDKRLRARYFFL
REEWQDTIGTVIYLTAALSWAAISYSWYCGLIATPVTIVGNALAISLLHE
MEHDLIHDLYFKRVKWVQNAMFAFIWVIKSNANPWWRRYYHLRHHQYAGQ
VVDVEERLIGLGLPWYSWKRILVTFTPAATLLIANDIAKDDPEFSKKVLV
RYNAPVIAFSTVAMVLHLLYYLGVGEALVSVGIFPPAFYAFLLRVVLPFV
VVYNGTVNLPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQVLNHPVLWP
FQLFCFNFGATHIIHHFVTRQPFYLRQLTAFKVTPILLEQGCRHNDLGNH
FRANRWGKEMRAMTLERRHFWVVCVTYVWLDMMDGVIYVNFEGDGIAELR
PSRT back to topmRNA from alignment at CM002455.1:1312281..1314141- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna523 ID=rna523|Name=rna523|organism=Nannochloropsis gaditana|type=mRNA|length=1861bp|location=Sequence derived from alignment at CM002455.1:1312281..1314141- (Nannochloropsis gaditana)
ATGGAATTAAGGTGCTCGATCCGTCACGTCGTTGATGGCGACCTCCCATT
CGTTGCGCTTCCCCCAGGATCCTCCGTCGCGAATTGCCTGAAAGGACACC
CCACCCTGTGGATGCCCCGTGATATTGCTCGTGTATGTCTGTTATATGTT
GTCTCATATCATGTCATGAATCCTGATGGAGAAGTTTGCCATTCACTTCA
CGAACCTCCCCCAGCATCTCACAACCGCATCGCCCTCTCCCTATTGACCC
CCTTCCCAGATGATGATGGATCCCCACGCTACCCGGCATCTTCCACAATT
GATCGCACGTCTTCCTCGGCCACCGCCACTGGTGATATCCCGCGTACTGC
ATCGATCTCTCATTTAAGTCAGGAGGCGGCCAAAGTCAAAATCATCCGGG
AAGCGATCCGTGCTGAGGACAAGCGGCTGCGAGCCCGCTATTTCTTTTTG
CGAGAGGAGTGGCAAGATACGATCGGTACGGTCATCTACCTAACAGCAGC
GTTATCATGGGCAGCCATTTCGTATTCCTGGTATTGTGGGCTCATCGCGA
CGCCCGTGACGATCGTCGGCAACGCCCTGGCCATCTCTCTTCTGCACGAG
ATGGAGCACGATCTCATTCACGACTTGTATTTCAAGAGGGTAAAGTGGGT
GCAGAATGCTATGTTTGCCTTCATATGGGTCATCAAGAGGTGAGTCCTGA
TGTCGATGTCACATCTCTCTTTCCTCTCAACGAACCGTTACGCATGGAGC
TCTTTTCCACTCCTGCCTTTGGTATGCATGATGAGAACATTCCAGTGTAC
GTGGGATGCTCGTCGAGAATGTCAAGTGTTCTACTTTCTTGTGGGGCAGC
TTCTACTTTCTCGTGCTGCCCCAAATGATGCTCCCTTACAACCCCCACCT
GTCCTCATGTTGTCCTCCCTCCCCTTTGACCCCTAGCAATGCCAATCCCT
GGTGGCGACGATATTATCACCTCCGGCACCATCAATACGCCGGTCAGGTC
GTGGACGTGGAGGAGCGCCTGATAGGTCTCGGTCTGCCCTGGTATTCTTG
GAAACGCATCTTGGTCACCTTCACACCAGCGGCCACGCTGCTGATCGCCA
ACGACATTGCCAAGGACGATCCCGAATTTTCCAAGAAAGTTCTTGTTCGA
TACAACGCGCCGGTCATCGCCTTCTCGACCGTGGCGATGGTTTTGCACCT
CTTGTACTACCTGGGGGTGGGAGAGGCGCTGGTCTCTGTAGGGATATTCC
CTCCAGCCTTCTACGCGTTCCTCCTCCGCGTCGTTCTCCCTTTCGTGGTC
GTGTACAACGGCACAGTTAACCTCCCTAACGTCCTCCGCCAGTCGTGCCT
CGTCATCATCAGTACCTACTGCCACTACTACGGCGACATTCCCGAGCGGG
ACGTGTTTTTCCAAACGCAAGTCCTGAACCATCCTGTGCTCTGGCCCTTC
CAGCTCTTCTGTTTCAATTTTGGCGCCACTCACATTATCCATCACTTCGT
CACGCGCCAGCCGTTTTATCTTAGGCAGCTAACGGCCTTTAAGGTGACGC
CCATCCTGCTGGAACAGGGGTGCCGTCACAATGATCTGGGGAATCACTTC
CGGGCAAACCGATGGGGTAAAGAGATGAGGGCGATGGTGGGTCATGCGAA
CAAGAAGTCGATCTGACGGCAACAAGGTGAGCCAGGAGCGTATGAGGACA
TGTGGTAGAGATAGATGACGGACGTTCATAATTAGACTTTGGAGCGAAGG
CATTTTTGGGTGGTTTGTGTAACATACGTATGGCTAGATATGATGGATGG
GGTGATCTATGTGAATTTTGAGGGCGATGGCATTGCGGAGTTAAGGCCTT
CAAGAACTTGA back to topCoding sequence (CDS) from alignment at CM002455.1:1312281..1314141- >rna523 ID=rna523|Name=rna523|organism=Nannochloropsis gaditana|type=CDS|length=4545bp|location=Sequence derived from alignment at CM002455.1:1312281..1314141- (Nannochloropsis gaditana)
ACTTTGGAGCGAAGGCATTTTTGGGTGGTTTGTGTAACATACGTATGGCT
AGATATGATGGATGGGGTGATCTATGTGAATTTTGAGGGCGATGGCATTG
CGGAGTTAAGGCCTTCAAGAACTTGACAATGCCAATCCCTGGTGGCGACG
ATATTATCACCTCCGGCACCATCAATACGCCGGTCAGGTCGTGGACGTGG
AGGAGCGCCTGATAGGTCTCGGTCTGCCCTGGTATTCTTGGAAACGCATC
TTGGTCACCTTCACACCAGCGGCCACGCTGCTGATCGCCAACGACATTGC
CAAGGACGATCCCGAATTTTCCAAGAAAGTTCTTGTTCGATACAACGCGC
CGGTCATCGCCTTCTCGACCGTGGCGATGGTTTTGCACCTCTTGTACTAC
CTGGGGGTGGGAGAGGCGCTGGTCTCTGTAGGGATATTCCCTCCAGCCTT
CTACGCGTTCCTCCTCCGCGTCGTTCTCCCTTTCGTGGTCGTGTACAACG
GCACAGTTAACCTCCCTAACGTCCTCCGCCAGTCGTGCCTCGTCATCATC
AGTACCTACTGCCACTACTACGGCGACATTCCCGAGCGGGACGTGTTTTT
CCAAACGCAAGTCCTGAACCATCCTGTGCTCTGGCCCTTCCAGCTCTTCT
GTTTCAATTTTGGCGCCACTCACATTATCCATCACTTCGTCACGCGCCAG
CCGTTTTATCTTAGGCAGCTAACGGCCTTTAAGGTGACGCCCATCCTGCT
GGAACAGGGGTGCCGTCACAATGATCTGGGGAATCACTTCCGGGCAAACC
GATGGGGTAAAGAGATGAGGGCGATGATGGAATTAAGGTGCTCGATCCGT
CACGTCGTTGATGGCGACCTCCCATTCGTTGCGCTTCCCCCAGGATCCTC
CGTCGCGAATTGCCTGAAAGGACACCCCACCCTGTGGATGCCCCGTGATA
TTGCTCGTGTATGTCTGTTATATGTTGTCTCATATCATGTCATGAATCCT
GATGGAGAAGTTTGCCATTCACTTCACGAACCTCCCCCAGCATCTCACAA
CCGCATCGCCCTCTCCCTATTGACCCCCTTCCCAGATGATGATGGATCCC
CACGCTACCCGGCATCTTCCACAATTGATCGCACGTCTTCCTCGGCCACC
GCCACTGGTGATATCCCGCGTACTGCATCGATCTCTCATTTAAGTCAGGA
GGCGGCCAAAGTCAAAATCATCCGGGAAGCGATCCGTGCTGAGGACAAGC
GGCTGCGAGCCCGCTATTTCTTTTTGCGAGAGGAGTGGCAAGATACGATC
GGTACGGTCATCTACCTAACAGCAGCGTTATCATGGGCAGCCATTTCGTA
TTCCTGGTATTGTGGGCTCATCGCGACGCCCGTGACGATCGTCGGCAACG
CCCTGGCCATCTCTCTTCTGCACGAGATGGAGCACGATCTCATTCACGAC
TTGTATTTCAAGAGGGTAAAGTGGGTGCAGAATGCTATGTTTGCCTTCAT
ATGGGTCATCAAGAGACTTTGGAGCGAAGGCATTTTTGGGTGGTTTGTGT
AACATACGTATGGCTAGATATGATGGATGGGGTGATCTATGTGAATTTTG
AGGGCGATGGCATTGCGGAGTTAAGGCCTTCAAGAACTTGACAATGCCAA
TCCCTGGTGGCGACGATATTATCACCTCCGGCACCATCAATACGCCGGTC
AGGTCGTGGACGTGGAGGAGCGCCTGATAGGTCTCGGTCTGCCCTGGTAT
TCTTGGAAACGCATCTTGGTCACCTTCACACCAGCGGCCACGCTGCTGAT
CGCCAACGACATTGCCAAGGACGATCCCGAATTTTCCAAGAAAGTTCTTG
TTCGATACAACGCGCCGGTCATCGCCTTCTCGACCGTGGCGATGGTTTTG
CACCTCTTGTACTACCTGGGGGTGGGAGAGGCGCTGGTCTCTGTAGGGAT
ATTCCCTCCAGCCTTCTACGCGTTCCTCCTCCGCGTCGTTCTCCCTTTCG
TGGTCGTGTACAACGGCACAGTTAACCTCCCTAACGTCCTCCGCCAGTCG
TGCCTCGTCATCATCAGTACCTACTGCCACTACTACGGCGACATTCCCGA
GCGGGACGTGTTTTTCCAAACGCAAGTCCTGAACCATCCTGTGCTCTGGC
CCTTCCAGCTCTTCTGTTTCAATTTTGGCGCCACTCACATTATCCATCAC
TTCGTCACGCGCCAGCCGTTTTATCTTAGGCAGCTAACGGCCTTTAAGGT
GACGCCCATCCTGCTGGAACAGGGGTGCCGTCACAATGATCTGGGGAATC
ACTTCCGGGCAAACCGATGGGGTAAAGAGATGAGGGCGATGATGGAATTA
AGGTGCTCGATCCGTCACGTCGTTGATGGCGACCTCCCATTCGTTGCGCT
TCCCCCAGGATCCTCCGTCGCGAATTGCCTGAAAGGACACCCCACCCTGT
GGATGCCCCGTGATATTGCTCGTGTATGTCTGTTATATGTTGTCTCATAT
CATGTCATGAATCCTGATGGAGAAGTTTGCCATTCACTTCACGAACCTCC
CCCAGCATCTCACAACCGCATCGCCCTCTCCCTATTGACCCCCTTCCCAG
ATGATGATGGATCCCCACGCTACCCGGCATCTTCCACAATTGATCGCACG
TCTTCCTCGGCCACCGCCACTGGTGATATCCCGCGTACTGCATCGATCTC
TCATTTAAGTCAGGAGGCGGCCAAAGTCAAAATCATCCGGGAAGCGATCC
GTGCTGAGGACAAGCGGCTGCGAGCCCGCTATTTCTTTTTGCGAGAGGAG
TGGCAAGATACGATCGGTACGGTCATCTACCTAACAGCAGCGTTATCATG
GGCAGCCATTTCGTATTCCTGGTATTGTGGGCTCATCGCGACGCCCGTGA
CGATCGTCGGCAACGCCCTGGCCATCTCTCTTCTGCACGAGATGGAGCAC
GATCTCATTCACGACTTGTATTTCAAGAGGGTAAAGTGGGTGCAGAATGC
TATGTTTGCCTTCATATGGGTCATCAAGAGACTTTGGAGCGAAGGCATTT
TTGGGTGGTTTGTGTAACATACGTATGGCTAGATATGATGGATGGGGTGA
TCTATGTGAATTTTGAGGGCGATGGCATTGCGGAGTTAAGGCCTTCAAGA
ACTTGACAATGCCAATCCCTGGTGGCGACGATATTATCACCTCCGGCACC
ATCAATACGCCGGTCAGGTCGTGGACGTGGAGGAGCGCCTGATAGGTCTC
GGTCTGCCCTGGTATTCTTGGAAACGCATCTTGGTCACCTTCACACCAGC
GGCCACGCTGCTGATCGCCAACGACATTGCCAAGGACGATCCCGAATTTT
CCAAGAAAGTTCTTGTTCGATACAACGCGCCGGTCATCGCCTTCTCGACC
GTGGCGATGGTTTTGCACCTCTTGTACTACCTGGGGGTGGGAGAGGCGCT
GGTCTCTGTAGGGATATTCCCTCCAGCCTTCTACGCGTTCCTCCTCCGCG
TCGTTCTCCCTTTCGTGGTCGTGTACAACGGCACAGTTAACCTCCCTAAC
GTCCTCCGCCAGTCGTGCCTCGTCATCATCAGTACCTACTGCCACTACTA
CGGCGACATTCCCGAGCGGGACGTGTTTTTCCAAACGCAAGTCCTGAACC
ATCCTGTGCTCTGGCCCTTCCAGCTCTTCTGTTTCAATTTTGGCGCCACT
CACATTATCCATCACTTCGTCACGCGCCAGCCGTTTTATCTTAGGCAGCT
AACGGCCTTTAAGGTGACGCCCATCCTGCTGGAACAGGGGTGCCGTCACA
ATGATCTGGGGAATCACTTCCGGGCAAACCGATGGGGTAAAGAGATGAGG
GCGATGATGGAATTAAGGTGCTCGATCCGTCACGTCGTTGATGGCGACCT
CCCATTCGTTGCGCTTCCCCCAGGATCCTCCGTCGCGAATTGCCTGAAAG
GACACCCCACCCTGTGGATGCCCCGTGATATTGCTCGTGTATGTCTGTTA
TATGTTGTCTCATATCATGTCATGAATCCTGATGGAGAAGTTTGCCATTC
ACTTCACGAACCTCCCCCAGCATCTCACAACCGCATCGCCCTCTCCCTAT
TGACCCCCTTCCCAGATGATGATGGATCCCCACGCTACCCGGCATCTTCC
ACAATTGATCGCACGTCTTCCTCGGCCACCGCCACTGGTGATATCCCGCG
TACTGCATCGATCTCTCATTTAAGTCAGGAGGCGGCCAAAGTCAAAATCA
TCCGGGAAGCGATCCGTGCTGAGGACAAGCGGCTGCGAGCCCGCTATTTC
TTTTTGCGAGAGGAGTGGCAAGATACGATCGGTACGGTCATCTACCTAAC
AGCAGCGTTATCATGGGCAGCCATTTCGTATTCCTGGTATTGTGGGCTCA
TCGCGACGCCCGTGACGATCGTCGGCAACGCCCTGGCCATCTCTCTTCTG
CACGAGATGGAGCACGATCTCATTCACGACTTGTATTTCAAGAGGGTAAA
GTGGGTGCAGAATGCTATGTTTGCCTTCATATGGGTCATCAAGAG back to top
|