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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100005g7.6749.mrna |
| Orig protein id | gnl|cribi|Naga_100005g7.6749 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:464051..465579 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5221 ID=rna5221|Name=rna5221|organism=Nannochloropsis gaditana|type=mRNA|length=2300bp
TACCAAGCAAGTGGGTCGCATGTCTATTCATCCCCTACATTATATGTCTA
TCTGCGTCGTTGTTGCAGTTGACGGGTAGAGAAATAATATAAAAAACAAC
TCGGAAAGGATGAGGTATCGTTTCCTTTTCCTTCGTGGTTATCGATGCCG
GAGCAAGAATTTCAAAAAGAGAAGGCCACTGACTGCTTGTTTGTCTGCTT
GTGCTATGTAAATCAAGCGCCCTAATGCCCCTGAGACCCCTGTCTATTTT
TCCGCACCTATGTGCATTCAAACCTCCCGTCCCCACCACACCTCCCTTAC
CCCGGCAGTGGTTGGCGGAGACAATCTGTCTAAGGGAATATGACGCGTTC
ATCAGTATCACTTATTGAGGTTGGCCATCTTGCAGCCGCAGTAAACGCTG
GTTCCCTTGCGAATGGCGAAGTGCCCACGAAAGAATCTACGACCCCCCCC
TCAACCAGCCATAGTGAAGACGGAAAAATGAGTGCAGTAAGCATGACGAG
CGCAGACTATTACTTTGACTCATATTCGCATTTCGGTATCCATGAAGAAA
TGCTGAAAGACGAAGTGCGCACGCGGAGCTACATGAACGCCATCATGCGA
AACAGGCACTTGTTTGAAGGCAAGGTGGTTTTGGACGTAGGGTGTGGCAC
TGGGATACTCTCCATGTTCGCTGCTAAGGCCGGCGCAGCTAAGGTAATTG
GCGTGGACTGCTCAACAATACTTGAGCAAGCAAAGCAGATTGTTGTAGCG
AACGGATTAGAAGATCGCATTACGCTCATCCGCGGCAAGATAGAGGAGAT
CGATCTGCCTGTGGAGAAGGTGGACATCATCATCTCAGAGTGGATGGGCT
ACTTCCTGCTCTACGAGTCCATGCTTGACACAGTCCTGTATGCGAGGGAC
AAATGGCTCGTCGCGGGAGGCCTAATCCTGCCCGACAAGGCGACCTTGCA
CGTGTGCGCTATCGAGGACGAGGAGTACAAACAGGAGAAGATCGATTTTT
GGGATGACGTCTACGGCTTTGACATGTCTGCGATCAAGAATCTGGCCATT
CTGGAGCCCTTGGTGGACGTGGTGGAGGCCAAGAGCGTGGTCACCCACCA
ATCGGTGGTACTGGAGCTGGACCTTCTGACTTGCAGCAAGGCAGATCTTA
CTTTCTCTGCCAACTTCTCTTTGCCCGCCCGCAGGAACGACTATGTCCAT
GCGCTGGTCGCCTACTTCGACTGCGCATTCACGCAGCTGCACAAACCCCT
CACTTTCTCCACAGGCCCCTTTGCCAAGTACACGCATTGGAAGCAGACGG
TATTCTACCTGCAGGAGACTCTGACAGTCTGTGCGGGGGAGGCCGTCACA
GGCACCATCAGCTCGGCGCCTAATGACCGCAACCCGCGCGATCTGGACAT
TCACATCGACCTCAACTTCGAGGGGAGGCACTGCAAGGCCCACGTTAGCC
AGGATTTCCGGTTGCGTTGAGCACGGAGTACTTGGGAAAAAGCAATCAGA
CAATGGGCTGACAGGCGAATCTTGCCTCAGGAGAAAGTAATTTTGGTGAA
AACTTAGGGTGTCTCTCTCATGTCAAATAACCCCACAATTGACGAGGAGG
GCGAGGAGAGCGAAGGGTTGCACGAAAGTGTGTATCATATTTCTGCTGAA
TCTTGAGAAGCATCAGTTCAAATTGATGACCAAAACGTGTTCTGTATAGC
AGCAAGTACCACGAGGAGAGAGTATCAAAGCTAGCTGGCTCCATTTTGTC
ATGCATTCTCTTACAAAATGCCATACTGACTTGCCAAGTTCGACTTCTGC
AACAGACGCCATCCTGCTACCTTGTGACACTCTTTGCTAACACAGTATCC
GAGCTTTGTGTACCCTCGACTTCCCGTCGACGTAAGCGACGCCTTCCAAG
CAGACCGTGCTTGTGGCCGACAAAACGGATCCAAGCGCGTGCACACCCTA
TATTCTTTATGTCTGCGCCGTTTTGTAACTTCCGCTGCCTCCCCAGGCCC
GAAGAGGATAGTCAGGAGAAGAGCATACGACGCGGAGTAGGCAGAGTCCC
TCTTTGGTGGGCCCTTCTTTGAAGCTCTCATGACCGCATATCTTTACCGC
GTCAAGCACTCTCATGCGACATGCTTCTTAAAAAGGGATATTCCACTTCT
CATCACGCTCGTTGACGCAAAGTCTATGCCGCGGTCGTGCGGGGAGGGCC
TGCACTGAGAGACCATCATCTTGGTCCGCAACGCAACGTCACATCTTACG
TCTTTCTTCCTATGCAGCACTCAATGGGCAGCATCCCCGGCGAGAATGAC back to topprotein sequence of rna5221 >rna5221-protein ID=rna5221-protein|Name=rna5221|organism=Nannochloropsis gaditana|type=polypeptide|length=106bp
MRASKKGPPKRDSAYSASYALLLTILFGPGEAAEVTKRRRHKEYRVCTRL
DPFCRPQARSAWKASLTSTGSRGYTKLGYCVSKECHKVAGWRLLQKSNLA
SQYGIL back to topmRNA from alignment at CM002465.1:464051..465579- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5221 ID=rna5221|Name=rna5221|organism=Nannochloropsis gaditana|type=mRNA|length=1529bp|location=Sequence derived from alignment at CM002465.1:464051..465579- (Nannochloropsis gaditana)
GGCGAGTAAGAGATGACGTTGATATCGCCGCCTGAGCGACTGGAACCGGG
CCCCGGCCACAGGCTCTTTCGCATGTGGCATCTTTCAGCACAGCCTTTCC
TCAAGCGGACGCGCAAATTTCTTCTTTTCCTTTCTTGTCTGTCCACAAAT
GGCGCTCCTGGGACGCACAGCACCGTCGCTTGAAGATCTGGCCACGCTTG
CCACTTACCTGTCCAACGAGGTGCGAAACAAGTTTCACGCCAGAATATAT
GGGATGATCACATTTCTTGTCAAATGCTCAGGGGATGCCCAACTACGAGC
GGCGCTGGGGCTCGCAGGAAGGAGCAATGCCGGGGATAGCAAGTGGGGGT
GAGGCTATAAGGAGAAGCCATTCCAAGCACTTGAATTGGTGAGCGCGGAG
AAGTTGAGCCATACGCAATCCCGGCCACAGGCAAGGACGGTGATGAGCTG
GTACAAGGACTGGACTACATTTCGGACCTTGAAACGGCAGCGCACGTAAA
AAGGGGCATTGGGAACAGTCGTAGATAGCTTCGACGGAACATCTTTGCAC
CCGGCGGCACTGGCAGGGTCCGGTGGCGTGGTTCAAGCATTGCTTGACAT
GGGCGGGAGCCAACGTAAGAAAAACCGATGAATCTCTGCACTCGAGTAGC
AATATGGCTGTCATTCTCGCCGGGGATGCTGCCCATTGAGTGCTGCATAG
GAAGAAAGACGTAAGATGTGACGTTGCGTTGCGGACCAAGATGATGGTCT
CTCAGTGCAGGCCCTCCCCGCACGACCGCGGCATAGACTTTGCGTCAACG
AGCGTGATGAGAAGTGGAATATCCCTTTTTAAGAAGCATGTCGCATGAGA
GTGCTTGACGCGGTAAAGATATGCGGTCATGAGAGCTTCAAAGAAGGGCC
CACCAAAGAGGGACTCTGCCTACTCCGCGTCGTATGCTCTTCTCCTGACT
ATCCTCTTCGGGCCTGGGGAGGCAGCGGAAGTTACAAAACGGCGCAGACA
TAAAGAATATAGGGTGTGCACGCGCTTGGATCCGTTTTGTCGGCCACAAG
CACGGTCTGCTTGGAAGGCGTCGCTTACGTCGACGGGAAGTCGAGGGTAC
ACAAAGCTCGGATACTGTGTTAGCAAAGAGTGTCACAAGGTAGCAGGATG
GCGTCTGTTGCAGAAGTCGAACTTGGCAAGTCAGTATGGCATTTTGTAAG
AGAATGCATGACAAAATGGAGCCAGCTAGCTTTGATACTCTCTCCTCGTG
GTACTTGCTGCTATACAGAACACGTTTTGGTCATCAATTTGAACTGATGC
TTCTCAAGATTCAGCAGAAATATGATACACACTTTCGTGCAACCCTTCGC
TCTCCTCGCCCTCCTCGTCAATTGTGGGGTTATTTGACATGAGAGAGACA
CCCTAAGTTTTCACCAAAATTACTTTCTCCTGAGGCAAGATTCGCCTGTC
AGCCCATTGTCTGATTGCTTTTTCCCAAGTACTCCGTGCTCAACGCAACC
GGAAATCCTGGCTAACGTGGGCCTTGCAG back to topCoding sequence (CDS) from alignment at CM002465.1:464051..465579- >rna5221 ID=rna5221|Name=rna5221|organism=Nannochloropsis gaditana|type=CDS|length=321bp|location=Sequence derived from alignment at CM002465.1:464051..465579- (Nannochloropsis gaditana)
ATGAGAGCTTCAAAGAAGGGCCCACCAAAGAGGGACTCTGCCTACTCCGC
GTCGTATGCTCTTCTCCTGACTATCCTCTTCGGGCCTGGGGAGGCAGCGG
AAGTTACAAAACGGCGCAGACATAAAGAATATAGGGTGTGCACGCGCTTG
GATCCGTTTTGTCGGCCACAAGCACGGTCTGCTTGGAAGGCGTCGCTTAC
GTCGACGGGAAGTCGAGGGTACACAAAGCTCGGATACTGTGTTAGCAAAG
AGTGTCACAAGGTAGCAGGATGGCGTCTGTTGCAGAAGTCGAACTTGGCA
AGTCAGTATGGCATTTTGTAA back to top
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