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Properties
Property Name | Value |
Product | protein arginine N-methyltransferase |
Orig transcript id | gnl|cribi|Naga_100005g6.6706.mrna |
Orig protein id | gnl|cribi|Naga_100005g6.6706 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002465.1 | supercontig | CM002465.1:462621..464920 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5220 ID=rna5220|Name=rna5220|organism=Nannochloropsis gaditana|type=mRNA|length=972bp ACGCCCGTCGCCCCCGCGGCCGCTATGCGCTCAACAGAGAAGTAGTTTTC ATCATTGAAACGTTAACGATAACAGTGTGTTGTAGATCGTTATAGAGATC TTTCAATGGTGGGATGTAATATTTGTGGGCTGGTGGAGAACGAAAGCTAT TTCTCGGCGCAACGAGCGAAGGGAGGAGAGTGATAGAGCGGGCACCACGA GATGTCTGTGCAGTGTGCCTACCCTGCCCGATAGACAGGGGCTTCATACT ACATTGTGAATATTTTTTCTTCATAAAAAGTATCATCTCTAAGTATGTGC TCGGTTCGGTCGATCCTGCCCTCCATTGTCTCACCACTTCCCTGCTTCTT TCCTTAATCTGCTCAATCGTTTGCCCTTACTTTTCTCAGTAGGAAGAATG GTCTGCATTCCCAAGGAGCGCAAGACCTTTTGCAAGGGCAAGAAATGTAA GAAGCATACCGTACATAAGGTCACGCAGTACAAGGCTGGCAAGGCTTCCA ATTATGCACAGGGCAAACGGCGCTACGACCGAAAGCAACAAGGGTACGGC GGTCAGACGAAGCCCATCCTGCACAAGAAGGCCAAGACCACGAAGAAGGT GACCTTGCGCCTCGAATGCAAGGAGTGCAAGACAAAGAAGCAGTTGGTCA TCAAGCGCACCAAACACTTTGAGTTGGGCGAGAAGAAGAAGGCGACGGGA CACCAGTACTAATGAGAAACCTGGCGGGCAAGCCTTGGAGACCGTTTACG GTGTAAAGCAAGCAGAAAAGAAAAGGGTAAATCAGGACTCCGCGCTCACT TCCATCGATGGAGGGAATTTGTGGAGTGTTTGTCAAAGCTGGGGCGAAAT GTAGACCTACGCATCATGACGGCTATTTAGCAAGCTGTGCTATTGGTACG CTAGAGGCTATTTTCCCTTTCTTTTTCCTTCATGCTTTCAAAAGAAATAA CACGGTTACCTCTTACGAACTT back to topprotein sequence of rna5220 >rna5220-protein ID=rna5220-protein|Name=rna5220|organism=Nannochloropsis gaditana|type=polypeptide|length=376bp MTRSSVSLIEVGHLAAAVNAGSLANGEVPTKESTTPPSTSHSEDGKMSAV SMTSADYYFDSYSHFGIHEEMLKDEVRTRSYMNAIMRNRHLFEGKVVLDV GCGTGILSMFAAKAGAAKVIGVDCSTILEQAKQIVVANGLEDRITLIRGK IEEIDLPVEKVDIIISEWMGYFLLYESMLDTVLYARDKWLVAGGLILPDK ATLHVCAIEDEEYKQEKIDFWDDVYGFDMSAIKNLAILEPLVDVVEAKSV VTHQSVVLELDLLTCSKADLTFSANFSLPARRNDYVHALVAYFDCAFTQL HKPLTFSTGPFAKYTHWKQTVFYLQETLTVCAGEAVTGTISSAPNDRNPR DLDIHIDLNFEGRHCKAHVSQDFRLR back to topmRNA from alignment at CM002465.1:462621..464920+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5220 ID=rna5220|Name=rna5220|organism=Nannochloropsis gaditana|type=mRNA|length=2300bp|location=Sequence derived from alignment at CM002465.1:462621..464920+ (Nannochloropsis gaditana) TACCAAGCAAGTGGGTCGCATGTCTATTCATCCCCTACATTATATGTCTA
TCTGCGTCGTTGTTGCAGTTGACGGGTAGAGAAATAATATAAAAAACAAC
TCGGAAAGGATGAGGTAtcgtttccttttccttcgtgGTTATCGATGCCG
GAGCAAGAATTTCAAAAAGAGAAGGCCACTGACTGCTTGTTTGTCTGCTT
GTGCTATGTAAATCAAGCGCCCTAATGCCCCTGAGACCCCTGTCTATTTT
TCCGCACCTATGTGCATTCAAACCTCCCGTCCCCACCACACCTCCCTTAC
CCCGGCAGTGGTTGGCGGAGACAATCTGTCTAAGGGAATATGACGCGTTC
ATCAGTATCACTTATTGAGGTTGGCCATCTTGCAGCCGCAGTAAACGCTG
GTTCCCTTGCGAATGGCGAAGTGCCCACGAAAGAATCTACGACCCCCCCC
TCAACCAGCCATAGTGAAGACGGAAAAATGAGTGCAGTAAGCATGACGAG
CGCAGACTATTACTTTGACTCATATTCGCATTTCGGTATCCATGAAGAAA
TGCTGAAAGACGAAGTGCGCACGCGGAGCTACATGAACGCCATCATGCGA
AACAGGCACTTGTTTGAAGGCAAGGTGGTTTTGGACGTAGGGTGTGGCAC
TGGGATACTCTCCATGTTCGCTGCTAAGGCCGGCGCAGCTAAGGTAATTG
GCGTGGACTGCTCAACAATACTTGAGCAAGCAAAGCAGATTGTTGTAGCG
AACGGATTAGAAGATCGCATTACGCTCATCCGCGGCAAGATAGAGGAGAT
CGATCTGCctgtggagaaggtggacaTCATCATCTCAGAGTGGATGGGCT
ACTTCCTGCTCTACGAGTCCATGCTTGACACAGTCCTGTATGCGAGGGAC
AAATGGCTCGTCGCGGGAGGCCTAATCCTGCCCGACAAGGCGACCTTGCA
CGTGTGCGCtatcgaggacgaggagtacAAACAGGAGAAGATCGATTTTT
GGGATGACGTCTACGGCTTTGACATGTCTGCGATCAAGAATCTGGCCATT
CTGGAGCCCttggtggacgtggtggaggccaagagCGTGGTCACCCACCA
ATCGGTGGTACTGGAGCTGGACCTTCTGACTTGCAGCAAGGCAGATCTTA
CTTTCTCTGCCAACTTCTCTTTGCCCGCCCGCAGGAACGACTATGTCCAT
GCGCTGGTCGCCTACTTCGACTGCGCATTCACGCAGCTGCACAAACCCCT
CACTTTCTCCACAGGCCCCTTTGCCAAGTACACGCATTGGAAGCAGACGG
TATTCTACCTGCAGGAGACTCTGACAGTCTGTGCGGGGGAGGCCGTCACA
GGCACCATCAGCTCGGCGCCTAATGACCGCAACCCGCGCGATCTGGACAT
TCACATCGACCTCAACTTCGAGGGGAGGCACTGCAAGGCCCACGTTAGCC
AGGATTTCCGGTTGCGTTGAGCACGGAGTACTTGGGAAAAAGCAATCAGA
CAATGGGCTGACAGGCGAATCTTGCCTCAGGAGAAAGTAATTTTGGTGAA
AACTTAGGGTGTCTCTCTCATGTCAAATAACCCCACAattgacgaggagg
gcgaggagagcgaaGGGTTGCACGAAAGTGTGTATCATATTTCTGCTGAA
TCTTGAGAAGCATCAGTTCAAATTGATGACCAAAACGTGTTCTGTATAGC
AGCAAGTACCACGAGGAGAGAGTATCAAAGCTAGCTGGCTCCATTTTGTC
ATGCATTCTCTTACAAAATGCCATACTGACTTGCCAAGTTCGACTTCTGC
AACAGACGCCATCCTGCTACCTTGTGACACTCTTTGCTAACACAGTATCC
GAGCTTTGTGTACCCTCGACTTCCCGTCGACGTAAGCGACGCCTTCCAAG
CAGACCGTGCTTGTGGCCGACAAAACGGATCCAAGCGCGTGCACACCCTA
TATTCTTTATGTCTGCGCCGTTTTGTAActtccgctgcctccccagGCCC
GAAGAGGATAGTCAGGAGAAGAGCATACGACGCGGAGTAGGCAGAGTCCC
TCTTTGGTGGGCCCTTCTTTGAAGCTCTCATGACCGCATATCTTTACCGC
GTCAAGCACTCTCATGCGACATGCTTCTTAAAAAGGGATATTCCACTTCT
CATCACGCTCGTTGACGCAAAGTCTATGCCGCGGTCGTGCGGGGAGGGCC
TGCACTGAGAGACCATCATCTTGGTCCGCAACGCAACGTCACATCTTACG
TCTTTCTTCCTATGCAGCACTCAATGGGCAGCATCCCCGGCGAGAATGAC
back to topCoding sequence (CDS) from alignment at CM002465.1:462621..464920+ >rna5220 ID=rna5220|Name=rna5220|organism=Nannochloropsis gaditana|type=CDS|length=1131bp|location=Sequence derived from alignment at CM002465.1:462621..464920+ (Nannochloropsis gaditana) ATGACGCGTTCATCAGTATCACTTATTGAGGTTGGCCATCTTGCAGCCGC AGTAAACGCTGGTTCCCTTGCGAATGGCGAAGTGCCCACGAAAGAATCTA CGACCCCCCCCTCAACCAGCCATAGTGAAGACGGAAAAATGAGTGCAGTA AGCATGACGAGCGCAGACTATTACTTTGACTCATATTCGCATTTCGGTAT CCATGAAGAAATGCTGAAAGACGAAGTGCGCACGCGGAGCTACATGAACG CCATCATGCGAAACAGGCACTTGTTTGAAGGCAAGGTGGTTTTGGACGTA GGGTGTGGCACTGGGATACTCTCCATGTTCGCTGCTAAGGCCGGCGCAGC TAAGGTAATTGGCGTGGACTGCTCAACAATACTTGAGCAAGCAAAGCAGA TTGTTGTAGCGAACGGATTAGAAGATCGCATTACGCTCATCCGCGGCAAG ATAGAGGAGATCGATCTGCctgtggagaaggtggacaTCATCATCTCAGA GTGGATGGGCTACTTCCTGCTCTACGAGTCCATGCTTGACACAGTCCTGT ATGCGAGGGACAAATGGCTCGTCGCGGGAGGCCTAATCCTGCCCGACAAG GCGACCTTGCACGTGTGCGCtatcgaggacgaggagtacAAACAGGAGAA GATCGATTTTTGGGATGACGTCTACGGCTTTGACATGTCTGCGATCAAGA ATCTGGCCATTCTGGAGCCCttggtggacgtggtggaggccaagagCGTG GTCACCCACCAATCGGTGGTACTGGAGCTGGACCTTCTGACTTGCAGCAA GGCAGATCTTACTTTCTCTGCCAACTTCTCTTTGCCCGCCCGCAGGAACG ACTATGTCCATGCGCTGGTCGCCTACTTCGACTGCGCATTCACGCAGCTG CACAAACCCCTCACTTTCTCCACAGGCCCCTTTGCCAAGTACACGCATTG GAAGCAGACGGTATTCTACCTGCAGGAGACTCTGACAGTCTGTGCGGGGG AGGCCGTCACAGGCACCATCAGCTCGGCGCCTAATGACCGCAACCCGCGC GATCTGGACATTCACATCGACCTCAACTTCGAGGGGAGGCACTGCAAGGC CCACGTTAGCCAGGATTTCCGGTTGCGTTGA back to top
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