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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100115g8.6570.mrna |
| Orig protein id | gnl|cribi|Naga_100115g8.6570 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1309585..1310083 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna522 ID=rna522|Name=rna522|organism=Nannochloropsis gaditana|type=mRNA|length=2247bp
ATGGGCAAGCAGGATAGAGGGTCTAGACCGCTTTGCTTCAAATTTGTGGT
CTATCCTGACAAAGAGGGAGAGGAGGGTCAGGCTGAGAAAGGGAAGGAGA
TAAGAACGACGTGGTGTAGTGACGAACTCGGACTCGTTGCAGGGAAAAAA
GAAGAAATATTACAGCATAGATCTTTAAGATTTGCTACTTACCCGTATGT
ATTGCAAATGTCGAGAAGTGGCATTGTTTTCCGTGGTCATAACGACATGA
AGGTCCTTGCTCTGCTGGCAGTGTTCCTGGCCGCGGTTGCTTCCGTCTCT
GCCTTTCTCACTGTTCCGTCTCATCGTTGTGCGCTAAGCACACAGAGCAG
TACAGCCAATATCCGCAAGCACTTTGGTACGACTAGTGCACGCAGTGCAC
GCAATGCTATGCTTGTGATGAAAGTCATGCCGGGAGGTAACAAAGGGGAA
AACGAGCGGTTGCGAACGTTGGAATCGGATTCAGAGCGTTGGTTCCAAGA
GCAGGAACGACGAGAGGCGAATGGCGAGATAGGCTTGCTGGAAAATCCTG
CTTTTTACACGGCCATTTTCTTCCTCTGCCCCCTGGTCATTCTGGTCGCC
AGCGCCGCCACGGGCGTCATTCCGGGCTTCATCTCGACTCCCTCCACTTA
CTCTACACTGGATGAAGTGAAGAGTAGTCTGTCGTATGGAGAGCTGACCA
GCGCCGCGGAGTACGCCTCGGGAGCTTCCTCGTTGTTTTGAAGGTGACCG
CGAGAATTTCCTTGGTTTCGAAGGGGAGGCCGACGGGGCTGATGGCGCTG
TTGCAACGATTAAATTTAAGGATGTAGAGCAATTATGATGGATGATGAGG
AATTAAAGCGGCAGGAGGGGAACTGGAACAATGTGGATTGACGTGACGGG
TGGGCCTGAGATAGGAAAGTGTTCGATGCGGGAGAAGTCACGAAGATAGA
AGGAGAAAAATATGGGAACGGCAGGGGCGGGTAGATTACAAAATTGCAAA
CTGGAGGTGTACATATGGAAAAGCTAGGGGAAAGCATAGAAGGGATCAAG
CAGGTGGTGGCTGAAACGAAGAGAGCTTGTTCCAAGGCGTCGATCCCCCC
CCCCGGAGGTTTCTCCTTGCAAGGGCGATGCTGCTCATTTAAGACCCATC
GTGCGGGGGGTTTGTTCGGACATCATAGAGAGCCAAGCGCTGTGTTACCC
TCGCGAAATTGAGCGGATTGGATTGAAGGGAGTGCGCGGCCGGTATAAAT
CGCTGGGTGACATGCACCTTTAAATCATTTACTCTCTTGCATGGATAAAA
TATACACACACCGAGTTGACACGACCCAAAACGCACGTGAAAAGGCAATA
ATGGCAGGGAAAAACCTAGAGCCAGAACCGGCATAAATTCCACTGGCACC
AGCCTGCAGGCTGTGATAATGTCTGAGTGTGGCAGCATTCGTCAGCCTGG
GATGTGAAGCAAGAAAATGGACGAGTTTCCACATCATAGGGATAAAATCA
TCATGTATCTCGTTGTTCATTCTTCAGATTGAGTATGTCTCGCCCTGCCG
TGCATGCCAGTGCCGGTCGTGGGCACGTGTGAAGGTCTTGGCCTCCGCAC
AGAACAGCCACGTAGAGAGCGCATGTCCCTTCATACCAATCATTCTTCTG
TCAAATATACACTCTGAGCCTATCGTGCTGTGGAGCGCACACAAAACACA
TGGATTCTATTCGAAGAAGCTTTTCCGTGTGTGCGCACGTAACGACGGCC
GAGTTGGCGTCCAGAAATTAAAAAAACACTACAATGTACTTGGATGTGCT
GTCTTCCAAGGAATGGAGAACCGTCAAGCGATGTCTTCTGCGCACTGGAC
ACCAAGTACCTGGGCATGGCTTCTCCCCTTCTGCCCCCCGCCAGTCCACG
GCCACCTCTTGTGTCGGGCCCCATTCCCCTCCGTTAGCACCACCTCCCTC
TCTACCTATACCGCTTGGTGTCACATCCTATTGTTTTGCACTTACACATG
ATGATGCATACGTGCCTATGTTTCCACGCTCAATGAAAACAGTAAAATAC
ATGCAAGGCAACCCTCGTTCGACCATCCTCCCCTCCTGCTCCACTATTCA
ATCTCCTACGGACCCAGCAATTCTCACACCTCACCTTCGCCTGCACGCTC
TCGCCCTGGTTCGCACCAAGGAGCTCTTTACTCGCGACGCATGCGAGTGC
CCGCCATCTTGGTGCGGTAAGTACGGTCCTCGGCCAACCGATCCTCC back to topprotein sequence of rna522 >rna522-protein ID=rna522-protein|Name=rna522|organism=Nannochloropsis gaditana|type=polypeptide|length=135bp
MCKCKTIGCDTKRYRGGRGLAGGRRGEAMPRYLVSSAQKTSLDGSPFLGR
QHIQVHCSVFLISGRQLGRRYVRTHGKASSNRIHVFCKNDWYEGTCALYV
AVLCGGQDLHTCPRPALACTAGRDILNLKNEQRDT back to topmRNA from alignment at CM002455.1:1309585..1310083+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna522 ID=rna522|Name=rna522|organism=Nannochloropsis gaditana|type=mRNA|length=499bp|location=Sequence derived from alignment at CM002455.1:1309585..1310083+ (Nannochloropsis gaditana)
ATGTGTAAGTGCAAAACAATAGGATGTGACACCAAGCGGTAtaggtagag
agggaggtggtgctaACGGAGGGGAATGGGGCCCGACACAAGAGGTGGCC
GTGGACTGGCggggggcagaaggggagaagCCATGCCCAGGTACTTGGTG
TCCAGTGCGCAGAAGACATCGCTTGACGGTTCTCCATTCCTTGGAAGACA
GCACATCCAAGTACATTGTAGTGTTTTTTTAATTTCTGGACGCCAACTCG
GCCGTCGTTACGTGCGCACACACGGAAAAGCTTCTTCGAATAGAATCCAT
GTGTTTTGTGTGCGCTCCACAGCACGATAGGCTCAGAGTGTATATTTGAC
AGAAGAATGATTGGTATGAAGGGACATGCGCTCTCTACGTGGCTGTTCTG
TGCGGAGGCCAAGACCTTCACACGTGCCCACGACCGGCACTGGCATGCAC
GGCAGGGCGAGACATACTCAATCTGAAGAATGAACAACGAGATACATGA back to topCoding sequence (CDS) from alignment at CM002455.1:1309585..1310083+ >rna522 ID=rna522|Name=rna522|organism=Nannochloropsis gaditana|type=CDS|length=1224bp|location=Sequence derived from alignment at CM002455.1:1309585..1310083+ (Nannochloropsis gaditana)
ATGTGTAAGTGCAAAACAATAGGATGTGACACCAAGCGGTAtagAGGTGG
CCGTGGACTGGCggggggcagaaggggagaagCCATGCCCAGGTACTTGG
TGTCCAGTGCGCAGAAGACATCGCTTGACGGTTCTCCATTCCTTGGAAGA
CAGCACATCCAAGTACATTGTAGTGTTTTTTTAATTTCTGGACGCCAACT
CGGCCGTCGTTACGTGCGCACACACGGAAAAGCTTCTTCGAATAGAATCC
ATGTGTTTTGTAAGAATGATTGGTATGAAGGGACATGCGCTCTCTACGTG
GCTGTTCTGTGCGGAGGCCAAGACCTTCACACGTGCCCACGACCGGCACT
GGCATGCACGGCAGGGCGAGACATACTCAATCTGAAGAATGAACAACGAG
ATACATGAATGTGTAAGTGCAAAACAATAGGATGTGACACCAAGCGGTAt
agAGGTGGCCGTGGACTGGCggggggcagaaggggagaagCCATGCCCAG
GTACTTGGTGTCCAGTGCGCAGAAGACATCGCTTGACGGTTCTCCATTCC
TTGGAAGACAGCACATCCAAGTACATTGTAGTGTTTTTTTAATTTCTGGA
CGCCAACTCGGCCGTCGTTACGTGCGCACACACGGAAAAGCTTCTTCGAA
TAGAATCCATGTGTTTTGTAAGAATGATTGGTATGAAGGGACATGCGCTC
TCTACGTGGCTGTTCTGTGCGGAGGCCAAGACCTTCACACGTGCCCACGA
CCGGCACTGGCATGCACGGCAGGGCGAGACATACTCAATCTGAAGAATGA
ACAACGAGATACATGAATGTGTAAGTGCAAAACAATAGGATGTGACACCA
AGCGGTAtagAGGTGGCCGTGGACTGGCggggggcagaaggggagaagCC
ATGCCCAGGTACTTGGTGTCCAGTGCGCAGAAGACATCGCTTGACGGTTC
TCCATTCCTTGGAAGACAGCACATCCAAGTACATTGTAGTGTTTTTTTAA
TTTCTGGACGCCAACTCGGCCGTCGTTACGTGCGCACACACGGAAAAGCT
TCTTCGAATAGAATCCATGTGTTTTGTAAGAATGATTGGTATGAAGGGAC
ATGCGCTCTCTACGTGGCTGTTCTGTGCGGAGGCCAAGACCTTCACACGT
GCCCACGACCGGCACTGGCATGCACGGCAGGGCGAGACATACTCAATCTG
AAGAATGAACAACGAGATACATGA back to top
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