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Properties
| Property Name | Value |
|---|
| Product | 60s ribosomal protein l44 |
| Orig transcript id | gnl|cribi|Naga_100005g5.6640.mrna |
| Orig protein id | gnl|cribi|Naga_100005g5.6640 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:461021..462481 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of rna5219 >rna5219-protein ID=rna5219-protein|Name=rna5219|organism=Nannochloropsis gaditana|type=polypeptide|length=104bp
MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGY
GGQTKPILHKKAKTTKKVTLRLECKECKTKKQLVIKRTKHFELGEKKKAT
GHQY back to topmRNA from alignment at CM002465.1:461021..462481- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5219 ID=rna5219|Name=rna5219|organism=Nannochloropsis gaditana|type=mRNA|length=1461bp|location=Sequence derived from alignment at CM002465.1:461021..462481- (Nannochloropsis gaditana)
ACGCCCGTCGCCCCCGCGGCCGCTATGCGCTCAACAGAGAAGTAGTTTTC
ATCATTGAAACGTTAACGATAACAGTGTGTTGTAGATCGTTATAGAGATC
TTTCAATGGTGGGATGTAATATTTGTGGGCTGGTGGAGAACGAAAGCTAT
TTCTCGGCGCAACGAGCGAAGGGAGGAGAGTGATAGAGCGGGCACCACGA
GATGTCTGTGCAGTGTGCCTACCCTGCCCGATAGACAGGGGCTTCATACT
ACATTGTGAATATTTTTTCTTCATAAAAAGTATCATCTCTAAGTATGTGC
TCGGTTCGGTCGATCCTGCCCTCCATTGTCTCACCACTTCCCTGCTTCTT
TCCTTAATCTGCTCAATCGTTTGCCCTTACTTTTCTCAGTAGGAAGAATG
GTCTGCATTCCCAAGGAGCGCAAGACCTTTTGCAAGGGCAAGAAATGTAA
GAAGCATACCGTACATAAGGTCACGCAGTACAAGGCTGGCAAGGCTTCCA
ATTATGCACAGGTGCGTGTTTAAGTTAACATCGGACACGGAGGGAAAAGG
AACGCGAAGTTCGTACTGATCATTTAGCGGATGATTATCGAGCATTGTGC
CATCTTCCAGCGACACTGTGAAAACCCATTTATTTTGGCAAGCTGCATTT
CAACGTGGCACGGCTATGAGAAGGGTAGGGGCGCCCATCCTGTCGGAGTG
TGGTGAATGAAGCTGGGAAGCTGTCACAGTTAAGGGGGCCCGTCCTGTAG
AAACTTGTTTGTGAGACATGAAGTGATCGATTCATTTGTCTTCTTTGAGT
TGTTAATGAAAAGAGAGAAAGTTAGTGCCGAGGCACGTGCGGAGGGATGT
TAAAGGAAGCATCTCGACACGTCGCAGTCACCACGCTTAGGCGATGGCTT
GTTTGAACGACCGTCAGGCAGTGTTTGAGAAGTGTTGGGGCTATCCGCGT
CTCAACGTTACTTTTATCCCGGTCTCTTTCCAATGAAACATGGCTTCCAG
GGCAAACGGCGCTACGACCGAAAGCAACAAGGGTACGGCGGTCAGACGAA
GCCCATCCTGCACAAGAAGGCCAAGACCACGAAGAAGGTGACCTTGCGCC
TCGAATGCAAGGAGTGCAAGACAAAGAAGCAGTTGGTCATCAAGCGCACC
AAACACTTTGAGTTGGGCGAGAAGAAGAAGGCGACGGGACACCAGTACTA
ATGAGAAACCTGGCGGGCAAGCCTTGGAGACCGTTTACGGTGTAAAGCAA
GCAGAAAAGAAAAGGGTAAATCAGGACTCCGCGCTCACTTCCATCGATGG
AGGGAATTTGTGGAGTGTTTGTCAAAGCTGGGGCGAAATGTAGACCTACG
CATCATGACGGCTATTTAGCAAGCTGTGCTATTGGTACGCTAGAGGCTAT
TTTCCCTTTCTTTTTCCTTCATGCTTTCAAAAGAAATAACACGGTTACCT
CTTACGAACTT back to topCoding sequence (CDS) from alignment at CM002465.1:461021..462481- >rna5219 ID=rna5219|Name=rna5219|organism=Nannochloropsis gaditana|type=CDS|length=630bp|location=Sequence derived from alignment at CM002465.1:461021..462481- (Nannochloropsis gaditana)
GGCAAACGGCGCTACGACCGAAAGCAACAAGGGTACGGCGGTCAGACGAA
GCCCATCCTGCACAAGAAGGCCAAGACCACGAAGAAGGTGACCTTGCGCC
TCGAATGCAAGGAGTGCAAGACAAAGAAGCAGTTGGTCATCAAGCGCACC
AAACACTTTGAGTTGGGCGAGAAGAAGAAGGCGACGGGACACCAGTACTA
AATGGTCTGCATTCCCAAGGAGCGCAAGACCTTTTGCAAGGGCAAGAAAT
GTAAGAAGCATACCGTACATAAGGTCACGCAGTACAAGGCTGGCAAGGCT
TCCAATTATGCACAGGGCAAACGGCGCTACGACCGAAAGCAACAAGGGTA
CGGCGGTCAGACGAAGCCCATCCTGCACAAGAAGGCCAAGACCACGAAGA
AGGTGACCTTGCGCCTCGAATGCAAGGAGTGCAAGACAAAGAAGCAGTTG
GTCATCAAGCGCACCAAACACTTTGAGTTGGGCGAGAAGAAGAAGGCGAC
GGGACACCAGTACTAAATGGTCTGCATTCCCAAGGAGCGCAAGACCTTTT
GCAAGGGCAAGAAATGTAAGAAGCATACCGTACATAAGGTCACGCAGTAC
AAGGCTGGCAAGGCTTCCAATTATGCACAG back to top
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