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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100005g1.6659.mrna |
| Orig protein id | gnl|cribi|Naga_100005g1.6659 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:444766..447145 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5215 ID=rna5215|Name=rna5215|organism=Nannochloropsis gaditana|type=mRNA|length=2877bp
ATGGCTGTCGAGGGCACGCGGCCCATAGAGCCGTGGTGGCAGAGACGAGG
ATGGAAAAAGTCTCTGCTAGTTCTTTTCGCTGCACTAGCCACAATCGGTC
TTATTGCGGGGATAGTGATAGCCTTCCAACCTGAGGAAAAGCATGCCTCG
CAGTCTCCTGCGCCTGCCGACGGAGTAGTCGAGGAGGCGAGCAGCATTGA
AACAGTTGTACCACCCCCGAGCCCCGCGGACAAAGCTCCTATTGTTGCAG
AGCCCGTCGAGCCAGAAGAGGTCAGTACGGAGAGCCTCCCCGACGGCCCC
GGGGGCTCTTTACCCGGATACAAGGTGCTCGACGGGGTGGCTGAGAAGTC
TTCGGATCTGATCGGTGGCGTGTTTGGAGAAGAAGCTGGCGCAGCTAGTG
AAGATTTCTTCAGCACCATGTTAAAGGATACGAGTCTGATTTCTGGTAGC
GCCTGCGTTCCTCAGTCGGGTATGGAGTTGAGGCAGATGGCGGAAGACCC
CTCCCGTTGCGCAATCATAAGCCTGCTCCCGGGCAAGATATATAATGTGG
CCTTGCCGGACAGCGATGACGACATTACTATTTCGACTCGCAAGGTCATT
ATCGGTAATCCTATCTCCCTGCCCACGATCGATGGCGCCGACTCGAAGCG
CATCTTCCACATTGTGGCGGGCGGCAACCTCGACCTCCAATTTGTGCGCA
CATACCGAGGTGGCGGTGAACTCATTGCTACCATCCCCGTCTTGCGCGGT
GGGACGGCTTTGGTTGAACTTGGCGGCCGCTTTTCGGCATTCGGTGTCAT
TTTCACGAACGCCCCGCCTGTGGGCATGCCTGCTATTCTGATCGCCCCCG
ATGTCTCCCGCGCCGTTCGCGTGTTCGGTGGTCAGGTTTTTGTCACCGGT
GGGATCGTAACCATCACGCTTTCACATTTCTGGGTCTTGCAGCCAGGTGT
GCTCTTCCGTGAGATCTACGTTGTGGGGGCTGATCTGCTCGTGGTTGCGG
GCGTCGCTGTTCTGTCCGGTGTGACATTTACGAACTCGCAGCTCTTCATC
AATGGCTTTGGGGTCGGCTTTTTGGTCGCTGTTCTGGGCGGTGTACTCGT
TAGCTCGGGCTGTACTTTCACGATCAATTTCCTGGCCATTAATGCCAGTG
GTGCCGGGATTTTAGTCTTTCTCGGCGGGGGCGTGGGCATCTTCTCGGGT
TGTGCCTGGGTGGCAAACTTGGCCGTTTTCTCGCATTTTGGCACAGGCCT
CGAGCTCTTTGTGGGCGGGGGGGTAATCGTCATTTCTGGCGGCGCTTTTT
CCGCGAGCTTGGGGGTTGCCATCGAATGCGGGACGGGCGTGATGGTCTCC
CTGGGAGGAGGCACGCTGACAATGACAGGGGTGACTCAACAGCTCTCGGC
CGGGGTGGACTTCTACGCAGGAGCAGGTGTCCTTAACTGGGTGGGGGCGG
GTTCGGCAGTGATCGTTGGCTTTTCCCAGTCTCGAAACGTGGGAGTGGCG
GGCGTGTATGGGATCGGGGGGACCATGGCTGTCGGCGCGGGGGTGCTGGT
CGTGGTCGGGGCCGCGAACGTGGACAACTATGGGGTCGCCTCCGTGGTCC
TGATCGGCGGGAACTATTTCCTGGGCGCGGGGATCCTAATCGACATCGGC
TCCCCCATGGCCAAGAACGTGGGGGTCCTTTTCGCATTCTTCCTGGGCTT
CGACGCCTTCGTGGGAGCAGGTGCTATTGTGGTTCGGGGCTCCCCCTCGG
CCGTGAACACGGGCGTGGCCTATATCGCCCCCCCTGTCTCTCAGTACTTC
GTGAACGGCCAGGCCGTCCCCGCCAGTTTCAAGAATTTCAAATTGGTAGG
CAAGGGCAACGCCACTGCAATCGTGCCCCGAGACAAGGCTGACAAGGAAC
TATTCAAGAGCTTCGACTTCGGTTTCGGCGCTTTCCTGGGCGACGATGAC
GAAGAGAATGACGGTTTTGTCAAAAAAATGATGAACAGAATGAAGAAGAA
GCTCGGTCGAGATGACGATGAGGAGGAATGGGGTTGGGACGATGATTGGG
AATGGTACGATGACGACTGGGAAACGAACTATGGCGGAGGGGGATACTCA
CCCGGGAAAGCAGGGGATGATGACTGGGAAGAATGGTGGGGGGACGACGA
TCGGGAGGCGCTCGAGGGGGGCGGCGGGTGGGGCGCAGATGATGATGACA
AGGAGGCCAACTCGGATATCGGATTCGATGACGACGACGAGGAGACCGAC
TGGGCGAGCGGTGCCACGGACGACGACCTGTGGGACGATGATCTCGGTGC
CGGTGGGAACGATGACTCGGAAGTGGCCCCCACAGACGACGACGTGCTTG
ATCAAGGCGCTGGGCTTGGGGGCTGGGACGACGACGAAGAAACGGGGGAT
TTGCGCGATGATGACGTGGAGACCCCACTTGTGAATGGTCCCAAGCAGGA
CCTCGGCGTGGTTGGCGAGACGGATGACGACCTCGAGGAATTCGGGGTGG
AGCATGACGATGACCTATTCGACAACCAGGACCTTGGCCTCGACGACGAG
GAAACTCAGGAGGAGGATGATTTGTATGAGCAAGATGCCCGTGACGATGA
CCTTGAGACATTTGGGGTGGAGCGTGACGATGATCTGTTCGACAATCAGG
ACCTTGGATTCGACGGGGCGTTTGACGATGACGTCGAGGACGATGATGTG
GAGGTCGAGCACGGTGCGGCGGACGATGACGTCGAGGACGATGATGTGGA
GGTCGAGCACGGTGCGGCGGACGATGACGTCGAGGACGATGATGTGGAGG
TCGAGCACGGTGCGGCGGACGATGACGTCGAGGACGATGATGTGGAGGTC
GAGCACGCACGGTGCGGCGGACGATGA back to topprotein sequence of rna5215 >rna5215-protein ID=rna5215-protein|Name=rna5215|organism=Nannochloropsis gaditana|type=polypeptide|length=451bp
MDDDDFYSYNIRKGRRQDQESDENAVEDDDVEEDMDEEVQENYLVQPLAA
ELEDFEIASAESQASAIPASSFTVLEGENTFSAGTPNAFVQAVKDSPLGS
VGTNTPQTHYAAVNGPIACNPCGFKGNMNKQIVGENAGACELSEEELSAC
SLEDVRVLGTDGTAQALPKWIKQASNLYDESSADMPLIDTQVTTAILKLG
CSSSAESVPEQCAQPSDLQSAISKALGDDCARVNVQKKNSIRHPELQEFA
LSNAEAFFKDSELTEVYDLSFTTHDDECAVLASDWVKQFKAADFASVLGE
MLPVDVLIDESNADFVTTHKVRGMALPQASSTVMSSVVGALSGNMVPTVL
VSTETGERLALPTFSQGETGKVMISGFSSTAPVGLTLTKKCGLGSSDDIP
IGQIVPKGKGSLTVPFEVPADLAPQTYSIKATQFAVSFCTQPFDVTASNQ
S back to topmRNA from alignment at CM002465.1:444766..447145+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5215 ID=rna5215|Name=rna5215|organism=Nannochloropsis gaditana|type=mRNA|length=2380bp|location=Sequence derived from alignment at CM002465.1:444766..447145+ (Nannochloropsis gaditana)
TGTAGAGGTCGAGCACGGTGCGGCGGACGATgacgtcgaggacgatgatg
tgGAGGTCGAGCACGGTGCGGCGGACGATGATTTGGAAGGCGTTCCCGAG
GATGATTTCGAAGACGAAGAgtacgacgacgatgatttTGAGGAAGATGA
CCTTGATTTTGACGATGCTGACATCAATGCCGGGGATGAGGAGTTCACAG
AAGActtgggggaggatgaaggcacGGCGGATGATGtcgatgacgaggac
gacctcgaggacgaggatgaggcagagaaagaagacgatgaggacggaac
tttcgaagaggatgagggtgaAGATGTCATTGATCTTAAAAATGGCAAAG
ATTATGACGACGTCATTCCTGTTGAAAACCACGTAATGGACGACGACGAT
TTCTATTCTTGTAAGTATGAGATGACTCTTTCTGTATGTCATTGTCAATA
TTGCCAGAAATAAATTAGTTCTCACTCCCATGCGCCTTTCATGCTTTCCC
AGACAATATCAGAAAAGGCCGACGGCAGGATCAAGAGTCCGATGAGAACG
ccgtcgaggacgacgacgtggaggaggacatggacgaggaagtgcaGGAG
AACTATCTGGTGCAGCCGCTGGCAGCGGAGTTGGAGGATTTCGAGATCGC
CTCGGCGGAGTCGCAAGCATCCGCCATTCCTGCCTCGAGTTTCACGGTCT
TAGAAGGCGAGAACACCTTCTCGGCAGGCACCCCGAATGCCTTCGTGCAG
GCGGTGAAGGACTCGCCCCTAGGCTCTGTGGGAACGAACACACCTCAGAC
ACACTACGCGGCGGTCAACGGCCCCATTGCCTGCAACCCCTGCGGCTTCA
AGGGCAATATGAACAAACAGATCGTCGGCGAGAACGCGGGGGCCTGCGAG
CTCAGCGAAGAAGAGCTGTCTGCCTGCTCCCTCGAAGATGTTCGGGTGCT
GGGCACGGATGGAACCGCCCAGGCGCTCCCCAAGTGGATCAAACAGGCAA
GCAATCTGTACGATGAAAGCAGCGCGGACATGCCTCTAATCGATACTCAA
GTGACAACAGCGATTCTGAAGCTTGGATGCTCTAGCAGCGCGGAATCAGT
ACCGGAACAATGCGCACAGCCGTCTGACCTGCAATCGGCCATTTCCAAGG
CCCTCGGCGACGACTGTGCGCGAGTGAACGTGCAGAAGAAGAATAGTATC
AGACATCCCGAGCTGCAGGAGTTCGCTTTGTCCAATGCAGAGGCTTTTTT
CAAGGACTCAGAGCTCACAGAGGTCTACGACCTCTCTTTCACGACACACG
ACGACGAGTGCGCCGTTCTCGCCTCGGATTGGGTCAAGCAATTCAAGGCC
GCGGACTTCGCGTCGGTCCTTGGTGAGATGCTGCCTGTCGACGTATTGAT
AGACGAGAGCAACGCTGACTTCGTGACTACCCACAAGGTGAGAGGAATGG
CCCTGCCCCAGGCTTCATCGACGGTGATGAGCTCTGTCGTCGGAGCGCTC
TCGGGCAATATGGTGCCCACTGTCCTAGTGTCGACGGAAACCGGCGAGCG
TCTGGCCCTCCCGACGTTTAGTCAGGGAGAGACGGGCAAAGTGATGATTT
CTGGATTCTCATCGACGGCGCCCGTAGGCCTGACGCTGACAAAGAAATGC
GGTTTGGGCTCAAGTGATGACATCCCAATCGGCCAAATCGTCCCTAAGGG
CAAGGGTTCTCTTACGGTTCCCTTTGAGGTGCCTGCTGACCTAGCTCCAC
AGACATACTCCATCAAGGCCACACAATTTGCGGTCAGCTTCTGTACGCAG
CCTTTCGATGTGACAGCCTCGAACCAAAGCTAGAAGCGCACGCTCACGCA
GCAGACGAAAAAGTACAAGATGTAGAGGGGGTGATAAggttgaaaagaaa
agagcATAATGGAATAGGATGGGCTAAAGGTGATATCAGGTGATGGTAAC
CAAGGTTTGAGCACTTTTTACGGCAGAAGGCGGTAATCGGTGACACAAAT
TCATATGATAGGAGGCTTTTCGATAAGCCCTTGGTCTTTGTGATGCGACA
GATGTAAGAAAAATAAGACTCCTCCATAGTGAGGCGGGTTTGACGTGTGG
GTCCCGACGATGAGATTTAATACGAGAGAACGCCAATATGAGGAGGGCCT
GAACTGGAGATATAGACGGCTGAACATCAGCGAAACTGGCAAGGCTGCTT
AGGCGAACCTTGAAGAATATTTCTTGTTCTCAATGCAATACAAAGGGAAG
AACTCAGCTGCCGTGTGCGACATGTTTCTTTCATATGAATCTAGCTTATT
CTTAGAGAATCTTATGTCACATGAATGGAACCACCTGGATAACATTGTAG
AATCACGAATAAAATGAAGCCACTTTCTGA back to topCoding sequence (CDS) from alignment at CM002465.1:444766..447145+ >rna5215 ID=rna5215|Name=rna5215|organism=Nannochloropsis gaditana|type=CDS|length=2712bp|location=Sequence derived from alignment at CM002465.1:444766..447145+ (Nannochloropsis gaditana)
ATGGACGACGACGATTTCTATTCTTACAATATCAGAAAAGGCCGACGGCA
GGATCAAGAGTCCGATGAGAACGccgtcgaggacgacgacgtggaggagg
acatggacgaggaagtgcaGGAGAACTATCTGGTGCAGCCGCTGGCAGCG
GAGTTGGAGGATTTCGAGATCGCCTCGGCGGAGTCGCAAGCATCCGCCAT
TCCTGCCTCGAGTTTCACGGTCTTAGAAGGCGAGAACACCTTCTCGGCAG
GCACCCCGAATGCCTTCGTGCAGGCGGTGAAGGACTCGCCCCTAGGCTCT
GTGGGAACGAACACACCTCAGACACACTACGCGGCGGTCAACGGCCCCAT
TGCCTGCAACCCCTGCGGCTTCAAGGGCAATATGAACAAACAGATCGTCG
GCGAGAACGCGGGGGCCTGCGAGCTCAGCGAAGAAGAGCTGTCTGCCTGC
TCCCTCGAAGATGTTCGGGTGCTGGGCACGGATGGAACCGCCCAGGCGCT
CCCCAAGTGGATCAAACAGGCAAGCAATCTGTACGATGAAAGCAGCGCGG
ACATGCCTCTAATCGATACTCAAGTGACAACAGCGATTCTGAAGCTTGGA
TGCTCTAGCAGCGCGGAATCAGTACCGGAACAATGCGCACAGCCGTCTGA
CCTGCAATCGGCCATTTCCAAGGCCCTCGGCGACGACTGTGCGCGAGTGA
ACGTGCAGAAGAAGAATAGTATCAGACATCCCGAGCTGCAGGAGTTCGCT
TTGTCCAATGCAGAGGCTTTTTTCAAGGACTCAGAGCTCACAGAGGTCTA
CGACCTCTCTTTCACGACACACGACGACGAGTGCGCCGTTCTCGCCTCGG
ATTGGGTCAAGCAATTCAAGGCCGCGGACTTCGCGTCGGTCCTTGGTGAG
ATGCTGCCTGTCGACGTATTGATAGACGAGAGCAACGCTGACTTCGTGAC
TACCCACAAGGTGAGAGGAATGGCCCTGCCCCAGGCTTCATCGACGGTGA
TGAGCTCTGTCGTCGGAGCGCTCTCGGGCAATATGGTGCCCACTGTCCTA
GTGTCGACGGAAACCGGCGAGCGTCTGGCCCTCCCGACGTTTAGTCAGGG
AGAGACGGGCAAAGTGATGATTTCTGGATTCTCATCGACGGCGCCCGTAG
GCCTGACGCTGACAAAGAAATGCGGTTTGGGCTCAAGTGATGACATCCCA
ATCGGCCAAATCGTCCCTAAGGGCAAGGGTTCTCTTACGGTTCCCTTTGA
GGTGCCTGCTGACCTAGCTCCACAGACATACTCCATCAAGGCCACACAAT
TTGCGGTCAGCTTCTGTACGCAGCCTTTCGATGTGACAGCCTCGAACCAA
AGCTAGATGGACGACGACGATTTCTATTCTTACAATATCAGAAAAGGCCG
ACGGCAGGATCAAGAGTCCGATGAGAACGccgtcgaggacgacgacgtgg
aggaggacatggacgaggaagtgcaGGAGAACTATCTGGTGCAGCCGCTG
GCAGCGGAGTTGGAGGATTTCGAGATCGCCTCGGCGGAGTCGCAAGCATC
CGCCATTCCTGCCTCGAGTTTCACGGTCTTAGAAGGCGAGAACACCTTCT
CGGCAGGCACCCCGAATGCCTTCGTGCAGGCGGTGAAGGACTCGCCCCTA
GGCTCTGTGGGAACGAACACACCTCAGACACACTACGCGGCGGTCAACGG
CCCCATTGCCTGCAACCCCTGCGGCTTCAAGGGCAATATGAACAAACAGA
TCGTCGGCGAGAACGCGGGGGCCTGCGAGCTCAGCGAAGAAGAGCTGTCT
GCCTGCTCCCTCGAAGATGTTCGGGTGCTGGGCACGGATGGAACCGCCCA
GGCGCTCCCCAAGTGGATCAAACAGGCAAGCAATCTGTACGATGAAAGCA
GCGCGGACATGCCTCTAATCGATACTCAAGTGACAACAGCGATTCTGAAG
CTTGGATGCTCTAGCAGCGCGGAATCAGTACCGGAACAATGCGCACAGCC
GTCTGACCTGCAATCGGCCATTTCCAAGGCCCTCGGCGACGACTGTGCGC
GAGTGAACGTGCAGAAGAAGAATAGTATCAGACATCCCGAGCTGCAGGAG
TTCGCTTTGTCCAATGCAGAGGCTTTTTTCAAGGACTCAGAGCTCACAGA
GGTCTACGACCTCTCTTTCACGACACACGACGACGAGTGCGCCGTTCTCG
CCTCGGATTGGGTCAAGCAATTCAAGGCCGCGGACTTCGCGTCGGTCCTT
GGTGAGATGCTGCCTGTCGACGTATTGATAGACGAGAGCAACGCTGACTT
CGTGACTACCCACAAGGTGAGAGGAATGGCCCTGCCCCAGGCTTCATCGA
CGGTGATGAGCTCTGTCGTCGGAGCGCTCTCGGGCAATATGGTGCCCACT
GTCCTAGTGTCGACGGAAACCGGCGAGCGTCTGGCCCTCCCGACGTTTAG
TCAGGGAGAGACGGGCAAAGTGATGATTTCTGGATTCTCATCGACGGCGC
CCGTAGGCCTGACGCTGACAAAGAAATGCGGTTTGGGCTCAAGTGATGAC
ATCCCAATCGGCCAAATCGTCCCTAAGGGCAAGGGTTCTCTTACGGTTCC
CTTTGAGGTGCCTGCTGACCTAGCTCCACAGACATACTCCATCAAGGCCA
CACAATTTGCGGTCAGCTTCTGTACGCAGCCTTTCGATGTGACAGCCTCG
AACCAAAGCTAG back to top
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