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Properties
| Property Name | Value |
|---|
| Product | dnaj-like protein |
| Orig transcript id | gnl|cribi|Naga_100207g10.9442.mrna |
| Orig protein id | gnl|cribi|Naga_100207g10.9442 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:418610..421093 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5205 ID=rna5205|Name=rna5205|organism=Nannochloropsis gaditana|type=mRNA|length=1428bp
ACACTTTCCATTCCCACGGGGGAGGACGCGCGAATCTTCTCTCTTCGATG
CCCTCACCCACACAGTACTTGCACGTTCCTCGAAAGAATTCGGCCATTCT
TTTTTCCCATTGATCTGCTTCCTTGACCTTTTTGACATCGAGAACGTGCC
ATCCCAGTACGGTAGCCTAGTAATGGCAGCCTCCCCGCCGAGTGCCTCCG
CGCTGGAGGACGCCATTCGCAGTATATTGGAGACCGCCAAGCTGGAGGAG
GTGACACAGCGCACGCTACGAGAACAGCTGGCAGGCCAATTTGGTTGTGA
TTTGACCGATGAAAAGGCCTTGATCAAAGAACTTACCATCCAAGTGCTCT
CGGAGCGACAAGAAAGGGAGGAAGCAGAGGCAAGCAGACAACCTGCAGGA
GATGGGGAGGCCAGCGTAAAGGTTGAGGGGGCTCTAGGGCTGGTACCAAG
CGATGATGAAAGTCGCGACGACAGTAGTAGCAGCAGTGATAGCGAGGAGG
AGAGGAAAGTAAAGAAGAAAATAGCCGGGAGGAAGAAGGAGAAGAGCAGG
GGGGAGGAAAAGAAAAAAGGGGGTGGATTTAATAAGGAATACGCGTGGTC
GGAGGAGATGGCGGCTTTCCTGGGCGAGGGCTACATGTCCCGCCCACAGG
TGACGAAGCGTATGTGGGAGTATATCAAGACCCAGGGTTTGCAGAAGCCA
GAGGATCGCCGGGTCATCCTCTGCGACGAGCGGCTCCAGCGTCTCTTCTC
GGTGCCCTCCCTGAACATGTTCAAGCTGCCCGTGATGATCAACAAGCACA
TGCGTCAGGACGACAGAGAGGAGGGGGCAGACGAGGGACGGGAAAAGCAG
GAGGGCGGGGAGGTGGGGAAGAAGGAAAGAGCGTCCACGAAGCCGAGGAA
TCCGAAGCGGAAGAAGACGGGGGAGGCCGGCACGCCCGCCAAGAGGGGGG
GCTTCCCTCCGGAGAAAATCTCGGTCCAGCTGCAGGGACTGATGGGCAAG
GCGACGGCCTCGCGGAACGAGGTGGTGAAGGAGATTTGGACGCACGTGAA
GAGCCACAACCTCCAGGACCCAGCGAACAGGATGATGATCTCCTGCGACG
CCACCCTCAAGGGCATCCTCGGCGTGGACGCCTGCCACGGCTTTGGGATC
AGCAAGCTCCTGACGCCTCACTTTTTGGGCCGTGCCTAGTCCGGCCGGGG
AGGTGGGGGACGAGGACAGCCCCCCCTCGACGTGGCTTCCTAGGCTAGAT
CGAGAGGAGGCAGGGAGGACGGGAGGGAGGAAGGGAGGGAGGGAGGGGGG
GGGGGGGACGCCGGTGCTGCGCGGCTGTCCGCAGGGGAAGGAAAAAGAGG
AGAGGGCGGTCGCATGCGTGGTTCTGTAGGTAAGCCGGTGGGACCGAAGG
AATTGACAAAGGAATCGACTGTAAGGAA back to topprotein sequence of rna5205 >rna5205-protein ID=rna5205-protein|Name=rna5205|organism=Nannochloropsis gaditana|type=polypeptide|length=396bp
MARNYHAAFGRSHLLVAMILVSVFQGLQSLKDYHNIFCGKENCYDLLGVP
QEAESPAIRRAFRQLSLVHHPDKGGSPRVFQALNKAYQVVSDEEQRSLYD
TCLKNQTFYVEKYGHFYLQQYYPKSNTLLVILFLLLVFSIMGPVIQHSKY
THACAYLRTAAVKGWGLHEGGSRETLEIRRRALERLRDQGKGGNGNGGAE
GGGKVAATVSAAGGGGKGKKKNKGGGPGGAGGGGGKQGGRGGGGSGGGKG
EEKVDPDFEAAVRAIVSEMEIRGGHREWEWDDMLVVKLFRLPAFLGASVL
FQTRWYVNHTLRGQPFSEEEEAYLAARMVGPGRWESLEEEEKTELVQARI
WEDKEWSFGDWVEERELQKMPPKMRKNYLRQKRRMANDGPGDLVSD back to topmRNA from alignment at CM002465.1:418610..421093+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5205 ID=rna5205|Name=rna5205|organism=Nannochloropsis gaditana|type=mRNA|length=2484bp|location=Sequence derived from alignment at CM002465.1:418610..421093+ (Nannochloropsis gaditana)
AACAGCGGTGAAGCTGCTTGTCGCCAGCGGCCTGGCTCAGATTTGAGAGT
TCTGTCGACCTTTGCAGTCCTCACCTGGCAATTATTTTCTGTTAAATCAT
AGGGGATGGCCCGCAATTACCATGCCGCGTTCGGGCGCTCTCATCTTCTC
GTCGCAATGATCCTAGTGTCAGTCTTCCAAGGGCTTCAATCTCTGAAGGA
CTACCATAACATATTctgcgggaaggaaaattgcTATGATTTGTTGGGAG
TGCCGCAGGTGAGTCACGTGGATCTTGCGGGAATCGGCAGCGTGCATCTC
ATTCGTGCCCAGACCTAAGACGAATTCCGACCGCCAGAGCGCGTGTGCAA
CGTTAGCTCTCTTATTGATTACCATGAGACGATGAATGTGTGAGGGCTTT
TGTAAGTCAAGCTTTTGCATTtacccctctccccggcaTGACAGGAGGCC
GAGAGTCCCGCCATCCGCCGCGCCTTCAGGCAGCTCAGCTTGGTCCACCA
CCCCGACAAGGGGGGCAGCCCCAGGGTCTTCCAGGCCCTGAATAAAGCCT
ACCAGGTCGTGAGTGACGAGGAGCAGAGAAGCCTCTACGACACGTGCCTC
AAGAACCAGACCTTTTATGTGGAAAAGTACGGGCACTTTTATCTCCAGCA
GTACTATCCCAAGAGCAACACGCTGCTGGTCAtactcttcctgctcctcg
tcttctccattATGGGGCCCGTGATCCAGCACAGCAAGTACACGCACGCC
TGCGCCTACCTGAGGACAGCGGCTGTGAAAGGCTGGGGCCTGCACGAAGG
CGGCTCCCGGGAGACCTTGGAGATACGACGCCGGGCCCTGGAGCGCCTGC
GGGACCAGGGCAAGGGTGGCAATGGCAATGGtggcgcggaggggggggga
aaggtggcAGCGACTGTGTCCGCGGCcggtggtggggggaaaggaaagaa
gaaaaacaagggggggggaccaggaggagctggggggggaggagggaagc
aaggagggcggggcggagggggaagcgggggtggaaagggcgaggaaaaa
gtAGACCCCGACTTTGAAGCGGCCGTGAGGGCCATCGTGTCGGAGATGGA
GATTCGAGGGGGGCACCGGGAGTGGGAGTGGGACGATATGCTGGTTGTCA
AGCTCTTCCggctccctgccttcctggGGGCCTCTGTGCTCTTTCAGACG
CGCTGGTACGTGAACCACACCTTGCGAGGCCAGCCCTttagcgaggagga
agaggcataCCTGGCGGCGCGAATGGTGGGGCCGGGACGGTGGGAgtcgc
tggaagaggaggagaagacggagcTGGTCCAAGCCCGGATctgggaggac
aaggagtggAGTTTTGGCGactgggtggaggagagggagctgcAGAAAAT
GCCgccgaagatgaggaagaacTATTTGCGGCAGAAGAGGCGGATGGCCA
ACGACGGGCCGGGAGACTTGGTGTCAGActagggggggggagtagATGAG
ATGGCGGGGAGATCTAGTGTGTTGTGGGGACAATTTTGTGCCTTTAGAAC
GGTTTGGGCGGTGAGCAGAAATAGGATTCTCTGTTCTTCTAAATCACGAC
AGGACCGCGGACCGTGGAGACGGAGTGGAGGggtaagggggaggacgaca
aaaCATCAGGCGTCGGGCGGTGGACCGAAAGCAAAGCACATTGCTAGGGG
GCAATCAAGGCAACCAAAGGCCAAGTAGGATTCTGGCTTAAGGACGTTCT
CTACATTCTTGCTTTGAACTTACATGACAATATATGGTACACGCGCCCCT
CCCTAGTagcccatctccttcaccAAGGCCGCGTACGAtgccagctcctc
cccggcccccttcctcccccctaaCCCGCGCCTCGACACCACagtgcctc
ccgcccccagtGGGGCCAGCACCAACACCGCACATATCTCGTCCCGCACC
CCGCACAGGGCCtgcaggtcctcctcctcccacgcggcTCCCAGcaaagc
ctccagcacccgctCTTGCGCGTCCCCGCCACCTGCCAAGAGATGGTCGT
GAAGAAGCAGCGCGGTATACAATTCTTGTGCGGCAAGCTTGCGCACACGG
GGGAAGCGATGTcctaggaggaggaggatgagacgCAGGGCTGCAGCgcc
ggcttcttcctcttcttggccgGCTCGGAAGGtcaggggagagaggaggt
ggagggcgactcTGAGACAGGCGAGAAGCTTTGTGACGTTGCGGCAGCCT
GTGACCTCGCGCAGCAGCCGGTCAGCCAGTCTCCAGGAAAGGCTCGCCTT
ACCTGCgtgcttcccgtcctcgctgcCCACCTCCCATCCTGCCGCCTGGG
CGCGAGACACCAGGACTCCTTTTTGATAAAACAAATCGAGGGAGCGGAGC
AGAGGCATGATGACGCGGTCGTTTCCGCTGTGCGCGTCAAACAGACCTAG
CAGGCTTTCGAAGAATTCctgaagacgagggggc back to topCoding sequence (CDS) from alignment at CM002465.1:418610..421093+ >rna5205 ID=rna5205|Name=rna5205|organism=Nannochloropsis gaditana|type=CDS|length=2382bp|location=Sequence derived from alignment at CM002465.1:418610..421093+ (Nannochloropsis gaditana)
ATGGCCCGCAATTACCATGCCGCGTTCGGGCGCTCTCATCTTCTCGTCGC
AATGATCCTAGTGTCAGTCTTCCAAGGGCTTCAATCTCTGAAGGACTACC
ATAACATATTctgcgggaaggaaaattgcTATGATTTGTTGGGAGTGCCG
CAGGAGGCCGAGAGTCCCGCCATCCGCCGCGCCTTCAGGCAGCTCAGCTT
GGTCCACCACCCCGACAAGGGGGGCAGCCCCAGGGTCTTCCAGGCCCTGA
ATAAAGCCTACCAGGTCGTGAGTGACGAGGAGCAGAGAAGCCTCTACGAC
ACGTGCCTCAAGAACCAGACCTTTTATGTGGAAAAGTACGGGCACTTTTA
TCTCCAGCAGTACTATCCCAAGAGCAACACGCTGCTGGTCAtactcttcc
tgctcctcgtcttctccattATGGGGCCCGTGATCCAGCACAGCAAGTAC
ACGCACGCCTGCGCCTACCTGAGGACAGCGGCTGTGAAAGGCTGGGGCCT
GCACGAAGGCGGCTCCCGGGAGACCTTGGAGATACGACGCCGGGCCCTGG
AGCGCCTGCGGGACCAGGGCAAGGGTGGCAATGGCAATGGtggcgcggag
ggggggggaaaggtggcAGCGACTGTGTCCGCGGCcggtggtggggggaa
aggaaagaagaaaaacaagggggggggaccaggaggagctggggggggag
gagggaagcaaggagggcggggcggagggggaagcgggggtggaaagggc
gaggaaaaagtAGACCCCGACTTTGAAGCGGCCGTGAGGGCCATCGTGTC
GGAGATGGAGATTCGAGGGGGGCACCGGGAGTGGGAGTGGGACGATATGC
TGGTTGTCAAGCTCTTCCggctccctgccttcctggGGGCCTCTGTGCTC
TTTCAGACGCGCTGGTACGTGAACCACACCTTGCGAGGCCAGCCCTttag
cgaggaggaagaggcataCCTGGCGGCGCGAATGGTGGGGCCGGGACGGT
GGGAgtcgctggaagaggaggagaagacggagcTGGTCCAAGCCCGGATc
tgggaggacaaggagtggAGTTTTGGCGactgggtggaggagagggagct
gcAGAAAATGCCgccgaagatgaggaagaacTATTTGCGGCAGAAGAGGC
GGATGGCCAACGACGGGCCGGGAGACTTGGTGTCAGActagATGGCCCGC
AATTACCATGCCGCGTTCGGGCGCTCTCATCTTCTCGTCGCAATGATCCT
AGTGTCAGTCTTCCAAGGGCTTCAATCTCTGAAGGACTACCATAACATAT
TctgcgggaaggaaaattgcTATGATTTGTTGGGAGTGCCGCAGGAGGCC
GAGAGTCCCGCCATCCGCCGCGCCTTCAGGCAGCTCAGCTTGGTCCACCA
CCCCGACAAGGGGGGCAGCCCCAGGGTCTTCCAGGCCCTGAATAAAGCCT
ACCAGGTCGTGAGTGACGAGGAGCAGAGAAGCCTCTACGACACGTGCCTC
AAGAACCAGACCTTTTATGTGGAAAAGTACGGGCACTTTTATCTCCAGCA
GTACTATCCCAAGAGCAACACGCTGCTGGTCAtactcttcctgctcctcg
tcttctccattATGGGGCCCGTGATCCAGCACAGCAAGTACACGCACGCC
TGCGCCTACCTGAGGACAGCGGCTGTGAAAGGCTGGGGCCTGCACGAAGG
CGGCTCCCGGGAGACCTTGGAGATACGACGCCGGGCCCTGGAGCGCCTGC
GGGACCAGGGCAAGGGTGGCAATGGCAATGGtggcgcggaggggggggga
aaggtggcAGCGACTGTGTCCGCGGCcggtggtggggggaaaggaaagaa
gaaaaacaagggggggggaccaggaggagctggggggggaggagggaagc
aaggagggcggggcggagggggaagcgggggtggaaagggcgaggaaaaa
gtAGACCCCGACTTTGAAGCGGCCGTGAGGGCCATCGTGTCGGAGATGGA
GATTCGAGGGGGGCACCGGGAGTGGGAGTGGGACGATATGCTGGTTGTCA
AGCTCTTCCggctccctgccttcctggGGGCCTCTGTGCTCTTTCAGACG
CGCTGGTACGTGAACCACACCTTGCGAGGCCAGCCCTttagcgaggagga
agaggcataCCTGGCGGCGCGAATGGTGGGGCCGGGACGGTGGGAgtcgc
tggaagaggaggagaagacggagcTGGTCCAAGCCCGGATctgggaggac
aaggagtggAGTTTTGGCGactgggtggaggagagggagctgcAGAAAAT
GCCgccgaagatgaggaagaacTATTTGCGGCAGAAGAGGCGGATGGCCA
ACGACGGGCCGGGAGACTTGGTGTCAGActag back to top
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