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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100032g21.242.mrna |
| Orig protein id | gnl|cribi|Naga_100032g21.242 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:314752..316842 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5169 ID=rna5169|Name=rna5169|organism=Nannochloropsis gaditana|type=mRNA|length=2027bp
AAAGTCCAAGGGCTTCGTGGCGGTATTGACATGTTCTCAAGGCATTGATA
TGAACGAATATTATCCCGCCGGCTACATAATACTTTATGGTGGATCTAGA
GATGCGAAGGACGATGTAATTCCTATGTAACCGTTTCACGCTGCCATTTA
TGTCCTTGGTACATTATCAACAGTGTTCAAGCGCTCATAAAATGATCTGC
AACGCAAACTCTTCAATGGCCGCAGTGGCGCTTATCGCGTTGTTGCTGTC
TGTATTTCAGGTCCCGCTTCATGCATCAGGGACACAATCTGATGACAGCA
TCAGCGCTGAAAGCAGCTCGGGCAGCTTCAGCCGATTGTTGGCCTATGAC
CTGCCTTTGCCCCATGATTGGATTCGCGAGGTAAGGCTTGATTGGGTAGA
TTGAGAATTTGCATTCAAATATTCAGCCAATTCTTATTGAGAAATGTTTC
TCGTCAGACTTCTCAATAGCAACATTCGCTGCAACTACGTAAAAAGACCG
TGGCTGGTTATGTTTTGTTCAGCTCCTTGAGACCATGTTCGATGCTTTGA
ATGTAAATGCACTAACAATCTCTTCTCATGTGTTTCAAGCTCCCAATCTC
CATCTGCTGTCACACTCATGATTCTTTCCACGAACAATTTCATGCATGCT
CGCCCCAGTATGAGAAGGACACCAGAGACATGTCGCAGTCCTTTTCCTAC
TCCTACTCTTTTTCATTTGAGTATGCGCCAACCACATCACCCAGTCTTGT
CCCCGCGATAGCTCCCACTATGCAACCGAATCTGCCTGGCACCATTCCCG
TCGTCAACTTGTTCCTCGTAGTAGCTGGCACACCCGAGGAACAATTTGCG
CTCGTCAGCGCGCTTGTCCTCTATTTCATTATGGCTTTGGATGTGCAGGA
AAGCGACATTTCGGTGGACACGCCGGTTTTGGAAAGGCTTCTTCACCAAA
GTCGCCGCCTTGCAGACACTGATCAAGGTCGTTTGTGCTCTTCTGGTGCT
CCTCAAAACTCTACCAGCATCAGTATCCGTAACTATGAGGACGCGGCAAA
AGTGCAGGATTCTCTTGATGGAATCATGAATGGCACCATCTCTTTAACAG
CTGTGGAAGGTGACAGCACTACTTTCCCGGTGAAGGATGGCATCTGCCAT
GGAGAGACAACACTTTCATTTGTTCCTCCACCTGCTGATACCCTGAACGA
TAAGAACAAGTCTTCTTCAGAGCCAGAGCCCCTTTCTGCCACATACATTT
CACTCATTGCTGTGGGAGGCGTGGCTATTCTGTGCGTTATTATTTTTGTG
GCCCGGCGGCGGCGACCTCGTTCTACAGTGGTTGCGCATAACTAAGAGCA
TAAACCGCGGAAAGCTCTATATTTGAGTGTGATGTACTTGGATGATTTTG
GACAAAGTCATTTGATGTCTACGCGATCGAAAAAGGAAAATTGAAAAGAG
AGCCAGATATTAAGATTCGGAGTAGGTTGATTTTTGAAAGTGTATGAGGG
TCTTTTCAGCGGTAATTATTTGAACAACAGGAAGTCCGGATATGGGAGGA
TGGGAGGATATGATAGCCGCATTTCCTACATGGAGTGTAGGTCACGATGC
CCCGGCATCGCCTTCAAGGCCAGTCGTGGGTCGAATGAGCGGTATTAATA
AGCAAGAATACACGTGCATGAAAATATAGCATAAAGCGCTATACCAAGCT
CCTTGTGTGTATATTATGATTCTTTCTTGATAGATTGGCATTCTTAAGGC
ATCACAAATACCTACAGAACATGCTTTCTTATTAGGGTTTCAACATCAAG
CGACGATCATCTCCCAACCCCATTTCTTCCGCAAAACAAAAGCAAGTCGC
ACGATTATTCGTAGTCATCTGTCGTAGTGGCCGAATATCGGGGCGCTTGA
AGAGCTTACATGTCCTGCTCAAGAACCCGGAGGGAGAGTGGCAGCATCTG
TGACTGATGAAGATGCGCCTGCGCACATGCGACGGATGACCATTCCAACG
TGTTTGCGACTGAAGAAAATACCCAAG back to topprotein sequence of rna5169 >rna5169-protein ID=rna5169-protein|Name=rna5169|organism=Nannochloropsis gaditana|type=polypeptide|length=494bp
MAHEATSLHLDKIPVGRTEPSAAMSAPLSTSMKEMGLVPDALRDGAQPTL
ESPILATASSPVSTRHSALKATVPTTLRAENSLRGTASQRDVISAPSAVG
EEAMVPRTISPTASPTASPTAAPTSSPSASPTSSPTSVGNGDSEMDISIE
STVEEPETTLAPSMVPTPTARPQVDTASPSSSPTSMPTSSHTSMPTSSST
ALPTSSTPGPSLASPTAGAEGEDLDAQNNENNSSPDTSGSNENTESTDGA
NDSGSEGSGDGEMDMPVESTVGEPGTTLAPSIGPTTTTRPQIDTTSEITG
PIPVTTIMLELAGSASQRLEAVTKIVGEIERTLLIKATFTTTRRTLASTS
LRASISLLSFHVKPYTTSLTGGRSLQAAGELCQNADMPRSKANITLDNYD
DTTAVNFLVENIVDGTQPLNLQDGTAVRDTVCNEDIVVRMFDPMAILSNN
TKANGGKFISAEAIIALAVIFPAVVLLLIILAYRRRSIVRTSHV back to topmRNA from alignment at CM002465.1:314752..316842- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5169 ID=rna5169|Name=rna5169|organism=Nannochloropsis gaditana|type=mRNA|length=2091bp|location=Sequence derived from alignment at CM002465.1:314752..316842- (Nannochloropsis gaditana)
TGTCGGTTTAAAATTCCAGTCCCCAGGCCCAGATCTTGCCCAACGTGTCC
ATAACCAGCAGGGGTGGCCAGGTCGAAGACTTACCGATGTCTCACTTTTA
AAACGATATTTTCTCCCACATCAACTCTATTTTGACTGGGGTGATTTACT
TGACTACTTTCAAGGCTCTCAAAGTGTGCTAAGGGCAATTACGTCCACAG
CCACTCCTATTTAAATTCCTCTTAGTCTATTACAAGCGACCACATGGCCC
ATGAGGCGACTTCACTTCATCTTGACAAGATTCCTGTCGGTAGAACTGAG
CCCTCCGCGGCAATGTCAGCTCCTTTGAGCACTTCCATGAAAGAAATGGG
TCTCGTACCAGATGCACTGCGTGATGGTGCTCAGCCTACATTGGAATCGC
CCATCTTAGCTACGGCATCCTCGCCAGTCTCAACGCGTCATTCTGCCTTA
AAAGCCACAGTGCCCACAACCCTGCGTGCTGAGAACTCTCTGAGGGGCAC
AGCATCGCAAAGGGATGTAATTTCGGCTCCATCGGCTGTTGGTGAGGAGG
CAATGGTCCCGCGCACCATTTCACCCACGGCTTCTCCCACTGCTTCTCCC
ACTGCTGCCCCTACATCCTCTCCTTCTGCCTCTCCCACGTCTTCTCCCAC
TTCTGTAGGCAATGGCGACAGTGAGATGGATATTTCCATCGAGTCCACTG
TAGAGGAGCCTGAAACAACACTAGCGCCGTCCATGGTACCCACGCCTACC
GCCAGGCCCCAGGTTGATACGGCCTCCCCCTCATCCTCCCCTACATCCAT
GCCCACGTCTTCCCATACATCCATGCCCACGTCCTCTTCTACTGCCTTAC
CGACTTCCTCGACCCCCGGACCCTCCCTGGCAAGCCCCACTGCAGGGGCG
GAGGGGGAAGACCTGGACGCTCAAAACAACGAAAACAATTCATCTCCGGA
TACCTCTGGCTCAAATGAAAATACTGAGAGTACTGACGGTGCGAATGACA
GCGGGAGCGAAGGCAGTGGCGACGGAGAGATGGACATGCCCGTCGAGTCC
ACTGTTGGAGAGCCTGGAACAACACTAGCACCGTCCATCGGACCCACTAC
TACTACCAGGCCCCAGATCGATACGACGAGCGAAATTACTGGCCCCATCC
CCGTCACCACCATAATGCTCGAGCTAGCAGGGTCGGCTTCACAGAGATTA
GAGGCAGTCACAAAGATCGTCGGGGAAATAGAGCGGACGCTACTTATTAA
GGCCACGTTTACTACGACCCGGCGCACACTGGCGAGCACTTCTCTTCGGG
CCTCTATCTCTTTACTTTCGTTTCATGTTAAACCCTACACAACGTCTTTG
ACCGGCGGTCGTAGCCTGCAGGCGGCAGGGGAGCTTTGTCAAAATGCAGA
CATGCCCCGCAGCAAAGCAAATATCACACTAGACAACTACGATGATACGG
TACGTTTTCTGACGTACCAAGATTTGTCTGCACGCATTCTCTATCGCCCT
TTATTGTAGTCGTGTTGCTTGTCCTAAGTATTCCATCTATACATGTACTC
CGCATATAATCATACCAGACGGCAGTGAATTTTCTGGTAGAAAATATTGT
AGACGGAACTCAACCTTTAAACCTTCAAGATGGTACGGCTGTCCGCGATA
CCGTATGTAATGAGGATATAGTAGTGAGAATGTTCGACCCGATGGCCATA
CTCAGCAACAACACGAAAGCAAACGGAGGAAAATTTATTTCAGCGGAGGC
CATCATAGCACTAGCAGTGATATTTCCAGCTGTGGTGCTTCTTTTGATCA
TTTTAGCGTATCGGCGTCGCTCAATTGTGCGAACCTCTCATGTCTGAATG
ATCCATAAGATGTATGACACAATACTTTTGCCTCGGTAGCTAAAAATGAT
GGACGAACATCAGCTGAAATTACGCGAAACATATCTTATCATAGACTTTC
GACACTTATACGTCGACAGGGGCGTAAAGACGCTTGTCAGCCGCAACCCT
TTACCATGGCAAAAAAGAAGTTCAAATTATTGACATGCTATTTCTTGGGC
GCATTATGTTATAAAGGGAAAAATAATGATGTTTCGTTCTC back to topCoding sequence (CDS) from alignment at CM002465.1:314752..316842- >rna5169 ID=rna5169|Name=rna5169|organism=Nannochloropsis gaditana|type=CDS|length=2970bp|location=Sequence derived from alignment at CM002465.1:314752..316842- (Nannochloropsis gaditana)
ACGGCAGTGAATTTTCTGGTAGAAAATATTGTAGACGGAACTCAACCTTT
AAACCTTCAAGATGGTACGGCTGTCCGCGATACCGTATGTAATGAGGATA
TAGTAGTGAGAATGTTCGACCCGATGGCCATACTCAGCAACAACACGAAA
GCAAACGGAGGAAAATTTATTTCAGCGGAGGCCATCATAGCACTAGCAGT
GATATTTCCAGCTGTGGTGCTTCTTTTGATCATTTTAGCGTATCGGCGTC
GCTCAATTGTGCGAACCTCTCATGTCTGAATGGCCCATGAGGCGACTTCA
CTTCATCTTGACAAGATTCCTGTCGGTAGAACTGAGCCCTCCGCGGCAAT
GTCAGCTCCTTTGAGCACTTCCATGAAAGAAATGGGTCTCGTACCAGATG
CACTGCGTGATGGTGCTCAGCCTACATTGGAATCGCCCATCTTAGCTACG
GCATCCTCGCCAGTCTCAACGCGTCATTCTGCCTTAAAAGCCACAGTGCC
CACAACCCTGCGTGCTGAGAACTCTCTGAGGGGCACAGCATCGCAAAGGG
ATGTAATTTCGGCTCCATCGGCTGTTGGTGAGGAGGCAATGGTCCCGCGC
ACCATTTCACCCACGGCTTCTCCCACTGCTTCTCCCACTGCTGCCCCTAC
ATCCTCTCCTTCTGCCTCTCCCACGTCTTCTCCCACTTCTGTAGGCAATG
GCGACAGTGAGATGGATATTTCCATCGAGTCCACTGTAGAGGAGCCTGAA
ACAACACTAGCGCCGTCCATGGTACCCACGCCTACCGCCAGGCCCCAGGT
TGATACGGCCTCCCCCTCATCCTCCCCTACATCCATGCCCACGTCTTCCC
ATACATCCATGCCCACGTCCTCTTCTACTGCCTTACCGACTTCCTCGACC
CCCGGACCCTCCCTGGCAAGCCCCACTGCAGGGGCGGAGGGGGAAGACCT
GGACGCTCAAAACAACGAAAACAATTCATCTCCGGATACCTCTGGCTCAA
ATGAAAATACTGAGAGTACTGACGGTGCGAATGACAGCGGGAGCGAAGGC
AGTGGCGACGGAGAGATGGACATGCCCGTCGAGTCCACTGTTGGAGAGCC
TGGAACAACACTAGCACCGTCCATCGGACCCACTACTACTACCAGGCCCC
AGATCGATACGACGAGCGAAATTACTGGCCCCATCCCCGTCACCACCATA
ATGCTCGAGCTAGCAGGGTCGGCTTCACAGAGATTAGAGGCAGTCACAAA
GATCGTCGGGGAAATAGAGCGGACGCTACTTATTAAGGCCACGTTTACTA
CGACCCGGCGCACACTGGCGAGCACTTCTCTTCGGGCCTCTATCTCTTTA
CTTTCGTTTCATGTTAAACCCTACACAACGTCTTTGACCGGCGGTCGTAG
CCTGCAGGCGGCAGGGGAGCTTTGTCAAAATGCAGACATGCCCCGCAGCA
AAGCAAATATCACACTAGACAACTACGATGATACGACGGCAGTGAATTTT
CTGGTAGAAAATATTGTAGACGGAACTCAACCTTTAAACCTTCAAGATGG
TACGGCTGTCCGCGATACCGTATGTAATGAGGATATAGTAGTGAGAATGT
TCGACCCGATGGCCATACTCAGCAACAACACGAAAGCAAACGGAGGAAAA
TTTATTTCAGCGGAGGCCATCATAGCACTAGCAGTGATATTTCCAGCTGT
GGTGCTTCTTTTGATCATTTTAGCGTATCGGCGTCGCTCAATTGTGCGAA
CCTCTCATGTCTGAATGGCCCATGAGGCGACTTCACTTCATCTTGACAAG
ATTCCTGTCGGTAGAACTGAGCCCTCCGCGGCAATGTCAGCTCCTTTGAG
CACTTCCATGAAAGAAATGGGTCTCGTACCAGATGCACTGCGTGATGGTG
CTCAGCCTACATTGGAATCGCCCATCTTAGCTACGGCATCCTCGCCAGTC
TCAACGCGTCATTCTGCCTTAAAAGCCACAGTGCCCACAACCCTGCGTGC
TGAGAACTCTCTGAGGGGCACAGCATCGCAAAGGGATGTAATTTCGGCTC
CATCGGCTGTTGGTGAGGAGGCAATGGTCCCGCGCACCATTTCACCCACG
GCTTCTCCCACTGCTTCTCCCACTGCTGCCCCTACATCCTCTCCTTCTGC
CTCTCCCACGTCTTCTCCCACTTCTGTAGGCAATGGCGACAGTGAGATGG
ATATTTCCATCGAGTCCACTGTAGAGGAGCCTGAAACAACACTAGCGCCG
TCCATGGTACCCACGCCTACCGCCAGGCCCCAGGTTGATACGGCCTCCCC
CTCATCCTCCCCTACATCCATGCCCACGTCTTCCCATACATCCATGCCCA
CGTCCTCTTCTACTGCCTTACCGACTTCCTCGACCCCCGGACCCTCCCTG
GCAAGCCCCACTGCAGGGGCGGAGGGGGAAGACCTGGACGCTCAAAACAA
CGAAAACAATTCATCTCCGGATACCTCTGGCTCAAATGAAAATACTGAGA
GTACTGACGGTGCGAATGACAGCGGGAGCGAAGGCAGTGGCGACGGAGAG
ATGGACATGCCCGTCGAGTCCACTGTTGGAGAGCCTGGAACAACACTAGC
ACCGTCCATCGGACCCACTACTACTACCAGGCCCCAGATCGATACGACGA
GCGAAATTACTGGCCCCATCCCCGTCACCACCATAATGCTCGAGCTAGCA
GGGTCGGCTTCACAGAGATTAGAGGCAGTCACAAAGATCGTCGGGGAAAT
AGAGCGGACGCTACTTATTAAGGCCACGTTTACTACGACCCGGCGCACAC
TGGCGAGCACTTCTCTTCGGGCCTCTATCTCTTTACTTTCGTTTCATGTT
AAACCCTACACAACGTCTTTGACCGGCGGTCGTAGCCTGCAGGCGGCAGG
GGAGCTTTGTCAAAATGCAGACATGCCCCGCAGCAAAGCAAATATCACAC
TAGACAACTACGATGATACG back to top
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