rna5159, rna5159 (mRNA) Nannochloropsis gaditana

Overview
Namerna5159
Unique Namerna5159
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1218
Alignment locationCM002465.1:293853..294179 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100032g9.277.mrna
Orig protein idgnl|cribi|Naga_100032g9.277
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:293853..294179 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100032g9gene4980Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25534.1cds5147Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna5159rna5159-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna5159 ID=rna5159|Name=rna5159|organism=Nannochloropsis gaditana|type=mRNA|length=1218bp
ATGACGGCAGTGCACCGTGGTGTGGCTAAGCTGTCCAAGACCTGCTTTTC
CTTTTCACGGACCCGGGGCCACCCCACACTTTCAAAAGCTGCCTTATCTG
CCTCGAAAGAAGTAGTCCAGTGGGGACGCTTAGGGCGCTCGTGCTTCCCC
ATGTCTGCCGGCACACTAGGCCTGTGGCCAGGAGGGGAAACGGTCTTGCG
GTTACCCTCGTACCCCTCGAATCAGCCAACCTGCACCCCGTGTCCTATCC
CCAGTGTTTCTCTGCGTAACTGGGGCACTTTGGCACGGGTAGCGAGAAAT
TTGGGCGGATGCGGCGGGAGGATACTGTCATTGCGACGGCATACGCCTAT
GTCCTTCCCGCCCTCATCCTCTGCCTTTGCTCCCCTCCCCTCCGTACCCG
CCACTCTTCCCTCCCCACCCTTTCCGATGCTTCCTTCTTGCCGGAGTGTC
ATGACACAAGCAAGTCTTCGAGATACTAATGCGCGGATCGAGCCTAAAGT
GCCCTCTCAGTCCTCAATTCAATTTGTCCCGCGCCGAAATTTCTGGTCTC
CGCGTTTCCTGCGTCAGCTCGGGTTACCCTGGTTCGCGCAAGTATTTTAT
GGGACACTCTTCGTCATCGGCGTCGGTGCCCTGGCCGTCACCTTATTCGC
GACATCGACTGTCTTTGCTGTTCTTTTTCTGGTCGCTTTTTTAGGGTACA
AACTCTTCAACAGACAGCCGAACCTGATGCGCCAGGTCATGCGGCGACAA
AGGCCTGCAGGGTCCCCGCCCTCACTTTTTGGTCCGCTCCTGGACATGAT
GACAGACGGGATGCTTTTTGATGGTTTAAAAAGTGCTAGAGGTGCCATAG
AACGAGACGTGTTGGGTATAATTAATAGTCATCCTCAGCTTCGGAGATAT
GGGACAGACTTTCGCTCGACGGGCTTGCACAAGATGAGTATGCAGGTGGT
GAACGAGGGAGAGAAGCATGTCGTGATGCAGCTCTTAGTAGCTTCAAGTA
AACCAAGGGAGATGTTTGTGCAGGTGGTTGCAAGTCGGCATGAGGAGGAA
GAAGACGGGACAGGAGATGGAGAGGAGAGGTGGGACTATGAAGATGTATC
AGTGCAAACACCAGATGGGAAGGTTATAGATTTGACAAAGGAGCTATTCA
AAGGAAAAGGAGGAAGGCGTATAATTATTGATGTACCTCCACGACGAGTG
AAGAAAGATGAGGACTAA
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protein sequence of rna5159

>rna5159-protein ID=rna5159-protein|Name=rna5159|organism=Nannochloropsis gaditana|type=polypeptide|length=108bp
METLQGISFRLSTPKNVLADRRRPWEGVVDGRPVLRKYGGTPRDIWPFHK
GRQDILSLWQLNDIRKVEGPRVTSVLLDWRWAWARSRGGSVDPCRLSGQG
RHPTSSTF
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mRNA from alignment at CM002465.1:293853..294179-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna5159 ID=rna5159|Name=rna5159|organism=Nannochloropsis gaditana|type=mRNA|length=327bp|location=Sequence derived from alignment at CM002465.1:293853..294179- (Nannochloropsis gaditana)
ATGGAGACTCTTCAAGGTATTTCTTTCCGCTTGTCTACTCCTAAAAATGT
CCTAGCTGACAGGAGGAGACCGTGGGAAGGGGTGGTTGATGGGAGACCTG
TCCTTCGAAAGTATGGTGGAACGCCACGAGACATTTGGCCGTTCCATAAA
GGCAGACAGGACATTTTGTCATTGTGGCAACTCAATGATATCCGAAAGGT
CGAAGGGCCACGAGTCACCTCGGTCTTGCTTGACTGGCGGTGGGCGTGGG
CCCGTTCCCGCGGAGGGAGCGTCGACCCCTGCCGCCTCTCGGGTCAGGGC
CGACACCCCACTTCTTCCACGTTTTAG
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Coding sequence (CDS) from alignment at CM002465.1:293853..294179-

>rna5159 ID=rna5159|Name=rna5159|organism=Nannochloropsis gaditana|type=CDS|length=327bp|location=Sequence derived from alignment at CM002465.1:293853..294179- (Nannochloropsis gaditana)
ATGGAGACTCTTCAAGGTATTTCTTTCCGCTTGTCTACTCCTAAAAATGT
CCTAGCTGACAGGAGGAGACCGTGGGAAGGGGTGGTTGATGGGAGACCTG
TCCTTCGAAAGTATGGTGGAACGCCACGAGACATTTGGCCGTTCCATAAA
GGCAGACAGGACATTTTGTCATTGTGGCAACTCAATGATATCCGAAAGGT
CGAAGGGCCACGAGTCACCTCGGTCTTGCTTGACTGGCGGTGGGCGTGGG
CCCGTTCCCGCGGAGGGAGCGTCGACCCCTGCCGCCTCTCGGGTCAGGGC
CGACACCCCACTTCTTCCACGTTTTAG
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Synonyms
Publications