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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100032g6.244.mrna |
| Orig protein id | gnl|cribi|Naga_100032g6.244 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:288335..289097 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5156 ID=rna5156|Name=rna5156|organism=Nannochloropsis gaditana|type=mRNA|length=7603bp
ACAGTCCCAGCTACTGCATGGCTGGCGTCCGCCGGTAACTTCGACGGCCT
CTTCTTCTTTTTCCGATCGCAGCAAGCCTGTCTCCGGTGGACAAGGAGGT
AATGGTCACGTTATCCTCAACCGCAGCAAATGCCGCGGCGATAAGCCAAC
AGCAGGCTTTCGACCCATTTGCGGCCGCCTCAGGAGCAGTTCTAAATCTG
GTAGCCTGCTGTTGCCTTGGGGTTACTGCCAGCAGATACCGGGTACTCGA
CCAGCAGGCCCTCTCTGCCCTTTCACGCCTTGTCTACAACGTCTTTCAAC
CCTCTTTGCTCTTTACAAACGTCCTGCAAATTCTGGCCACCCCGTCTCAG
ACTCGGGGCACCATTTTTCTTCTCCCTTTGGCCGCTGCCGTCCAAATTGT
CACGGCGGCGGGCATCTCGAGAGTGCTGCTCCGCCTGGTCGGTCTGAATC
CATTTAGCGAGGCTGGGCGTGAGGTGCGGATCTGCTCCACCTTTGCAAAT
GCGGGCCCCTTACCCCTCTTGTTCGTGGATGCCCTCTTCAAAAACCATCC
CGACCCGACCCTCCGCACCAGGGCCGTCGCCTTCATCTCTTTCTACTTGC
TGGCCTGGTCCCCCCTCTTTTGGAACTACGGCTACGGCATCCTTGTGGAC
AAGACAGAGGATACAGGGGGAAAGAAAGGGCAACCGATGGAGTATTCCTC
GCTGGGGACGCAGTCCGTGGGAGGGCCGCGTCTTGGCTCGGGCACGGGTG
GCGCGGGCATGATGGTCAAAGGCAATGGGTCCGCCGCAGCCATGGTCTTG
GAAGAAGGCTTCGATGGGAAGGAGGCCCATGCGACGAATTGGACCTCCCC
ACACCAGCAACAGTACAGCCGGCAGCAGGTGCCGTGCTCGGAGGGCCGCA
GCGACCCTTCACATGCCCTCGTCAGGTCAGCGTTGGAGAAAGCCCGGCGA
GTCGCACATTCGCGGGCGATGAAGAAGCTGCTCAACCCCCCGACCTTGGG
GTGCACGCTGGGGGCCCTGGTAGGCGTTTGCTCTCCGCTTCGCGGGCTCT
TGTTCGGGGACACTGCGCCCTTCTCCTGCGTGTTTTCCGCTCTGAGGACC
ATGGGCTCTGCTTACGTGCCCTCTGTGCTCCTGATTCTTTCCGGATCTCT
GGCGCAGGGTCTGGAGGGCTTTGATAGCAACGTTTTCCGGCGTGCCATGT
TGGTCATGTTTCAACGTTTTTGCATCATGCCTGCAGTGGCGTTTGCGTGC
GTTGAAGCCGGAAAACGCACAGGGTTACTGCCCACCCAGGACCCTTTACT
CCTCTTTGTGATCCTCTTGCAAGGGTGCATGCCCTCCGCTCAAAACTCTG
TACTCATTTTGCAATTAGAGAGACGGCCTCAGGCGGCTGCGTCTATGGCA
CGCCTCATTTCGACCGTCTATATTTTGTCCATACTACCCGTTGGTATGTT
GATCCGTTCGTTACTCTCCTATTGTCCCATGGGATTCACCGCGTAACATT
CGGAAGAATGATTAAAGCGACCTAACAGGCAAAAATTGCATCTCGTCATG
TAATGGTTCACAACAAAAAATGGATACGTTGATTCCGAGCTTATTTGATG
TCATTTAGCTGCCTTTTGAGGTCTCCGAGAGAATTGGAAAAGCGTCCAGC
TACGCTTAGCTACGCCACACGAGCCCTTCCCCGGCGGAAAGGGTTATCTC
AAATAAATGCGTGTCAAACAACCCCGCACAAGCACCACAGAGCTTGGTCT
CATCCCACACATATGTAGTGCATCTTCTTGTGGGTATTGGAGGCAGTTTG
CCCCCTAGACGCCTTTTTCCCCCTGATACCGAACATGTCCTGAATACTTA
CTACCAGCGCTCTAATGACCCGAAGAAACCGCCCACCGCTCACTCCCCGC
AAATATTCACTCTACCATCTTATCCCGCGTTCATCCACAGGCGAAGCTCC
GAGTGGCCGAGTACTTGAACTACTACATCGTGTGTTATCTCTATCAGGTG
GTTTTGCGGTCTTTCCAGGATTGTTGGACCCGAAGCAATCCTACAAAAAG
CATGTGGCACCCAAATAGCCTGATGCCTTCAGGCTACGAAGATGCCATCG
CGAGCCAGTCCGTGAAGGATCAGCCACCAAAGGAACAACAGCAGCAATGT
CAGCCGTCATCTCAAGGGGTGTATGGGCAGATGGTCTCAGGTGTATCGCA
GGAAAAAGTGAAAAGAGGCCCTAACAAGGGAAAGCCTAATTCCAAAGATT
CTGTAAACAAAGGTCGGCGTCAGCAGCAAGGAAATGGACAAAAAATGCAA
GATCAGCCATCAGAAATGCAACATTTCCAACAAGGCAGCTGTTTACCGTC
TTTCGAGCAGCAGTGGATGGCATTGATGGGACAAAATCTTACCTCGAACA
GAGCCCCTCATCCTTTCCACGGCACGGTTCCCGCCGGCTCATTCAATTCG
ATGCGGGTCGATATCCATCAAGTCATGGCACCGGGAGTGGCACACAGCTT
TATCATGTGGTGCATGAACCAGCGACCGCACCTCCCGCACGAAGCAATTC
ACTCCATGGTGCAGACTCAAGCAGGGATCTTGGCGCGGGCCATGATCCTC
AAGGGCGCTTCTCACCTTTTGACAATGGAAGAGCTTTCTCTTTACGTCTA
CGACCCGACAACACTCTGCGAGCTACAAACAGCGCTCTGGCGGGCAGCGA
ACGAAAGGGTGGTGGTAAGCGAGGGGTGGCTCCTGCTCCTGTCCTTCTTG
GGCTTAGCGCCGTCCACGGGCCCGACCCTGGCACCCGCCCCGGCCCATGC
TATGAACACTTCTCAGAATGGGGGGGGGGGGCAAAACGCCCTGCATCAGA
TGTCACCCTTTCCCTTAAGTCTACCAGCGGGCGCGTCTCCTTTCTCCTTG
CCCTCTTCGGGCCAGGGGGAGGCTGGAGGTAGCCCTTTCTTGCCCGCGCC
CCACCAGCTTCAAGCACAGCAACGAGCTCATCAACAAGTTTTGGCCCTTG
CTCTCATGGCGCAACAGCAACAAAACCAACAAGCGCGAGGATCGGTTCCC
GGATTGCCTTTCATAAATATGCTTGGGCCAGAACAGAATTCATTTCGACA
CGTCTTGGAGCCGCAAGCTTCGCGATGGCAGCACCAGCAGCAGCAAGCAA
ATAATTTGTTGTTGCTGCAAGACACAGTGGCGAAGGAAAGCAGAAAAGTG
GGCCAGGAGAAACCGCATGGCTCGAACACCAAGAACAAGCGGCCGCAGCT
GTCAGGAAAGGAGCGGGGATGGCGACAAGCAGCCAAGGCTGTAGGGACGG
GGGCGTCCGAGGGCGCATCCCTTTCCAAGGCACCTGACTCGAGCACGAGG
CCGATAGCGCCCTTGCCCATGGCTGCCACCGAGGACCGCTGGCAGGAAAG
GGAGCCACAGGCGGAAAATCGTCTCTCATACCCCGCTGGGGGCCGCGGGG
GGGACTCCCAGGGGCCTCCCGCCGGTCCTCGTGCTCCTGAGATCCCGCCT
TCGTCCTTGCCCACTCCTCTGGGATCTCCCTTGCACGTAGATCCTTTGCC
TCCTGCCAAGCTTTCATCCTCTGCGTCCACCTCGGCGATGCCAGGGCCAC
GGCCGGCACCTACGGCCTCGGTCATGTCGCAGGCCTCGCACTTCTCGTCC
TCCACCGACGCCTCCCTCCCCTCCGACATGGCTGTATCTTCCTCTGAGGC
CGCCGTTTCTCCCTTGTCCATGACCGCTTCTGACAGGCAAGGGCCTGCGA
GCGCAGACGAAGATACGGGGGAGAAGACGCGGTATGGAGGGGCCCTGACT
GTGTCAGCGAGGCGACCGGATGTATCCCCCGACGGAAAGGAAGCTACGGT
ATTCTTCGCAGCAGCGCGATCCCAGCCACAGTCACAGGAGCAAGAAAAGG
CCCAGGGGCGGGAGCAGGGGTTAGGGCGGTTGAAAGAGCAAGACGAGGAA
CAGCATTGGGTGGAGCGGAATGACGCGGCGAAGGGTAGCATGGCCACCCA
ACAATTTATGCGCGAGGGGTACAAGGGATCCGGGGGGAGTCACACGGGAA
CCACGTGGGATTCCTCGGACGACGAAAGCGACATGGAGCTGGATGGCCAC
GCGGAAGTGCTCACTAGCTTGTCATTGGCCTTGGTAGGAAGCCAGGAGCA
GAAGGGAGGCTCCCAAACAAGCAGGGGCCAGTGGCCGGCGAGGGAGGAGG
AGGAGGAGGAGGAAGGCGAGGATGCTTCTGACTTGGGTGTGGAGGAATTG
GAGGACGAGGAGAGTGGCCAGGACTCCGATGCGATGCAATACGCAGCGGA
GCGCAAATTGGGCCCTGGCACGCTCGGCCCCTATCGCCCCTTGACCGTGG
CGCACAAGGAGGCACCCCCGCTCCTCAGGAAAGGCCGTCGTGTCCGACGT
CGTCGGTCGCACGCGATCGATGATTGTTTGCTCTGTGACTTTGCTGGATG
GATGCGTCAGGACTTGGGCATCACGAACCAGCTCATGGCGCGGGCCATCA
GCATTGGTATCGACGATGGTGTGTCCCGCCTGGTCAAGCTGCTCAAGCCG
CCCGCGGACCTTCCATCGACGGGCGATTTCTTAGGGGTGTCAAGCATTTC
CACGCCTGCACGCGGTCGGGTGCTTTTCAGGAAATGGGAGGAGGTGATCC
GTTTCTTGGAGAGGTCCGTAACCGAATGCTGGAGCCGTTTGCCTCCGTCC
GCGGGACCCACGTTGGACTACCACGTCAAGCAAATTCAGTGTTTTGGCAG
CTTCCTTCGTGCGCAGGGTTTTGATTTTCAATTGGATGGGGGCTCAACCT
GTCAATCGACGATTGGCCTGACGCGCTTGGCGAAGGCGATGTTTGGGCGG
ACGGCGTCGGAGCTGGAGGAGGAGCGTAAACGAGGGAAGACCCAGGAGAT
AGGCAAGGTGGAAGGGATGAAATACGCACTGTCCGCGGAAACGATGCAGC
AGGTGCGCCACTGGGCGGCGATGGAGAGATGGGGGGCAAACAGAGGCGGC
TTGGACTCGGCGCAGGTCATGAAGATGGTGGGCCGGGCAGCTCAAGCTCT
CAAACGAAAGCACATCAACCCCATCGCGTATTTCACGGACACAAAATGGT
CCCGGATCGATGGCAACCTGTGGGAGCAGGAAATTGGTGCCTTCCTGGGA
CTTGAAGCATGTCAGCGATGCAATAACCGTCGGTCGGTGAAGGAAGCGAG
GTCTTCGGAGGCGGAGAAGGAAAAGACTTTGAAGGAGATGGCGGAGGGAG
AGGACAATTGTGGCCTGCCGGCCTTGCACGCATATCTGACGTCGCGAAAG
GCCTTGCCACCCCCGCAATCGAATGACGGCATGGTCATAGGCGCCATGAT
GGAGGAGGTGGTTCGGGACCCGCGGGCCTTTTCCCTGCCCTTCATCAAAA
AGAGGCGGTCGCCCTCCCGGCCCGCCTACAGGGAGCCGTTCAAACAAAGG
TCCGGGCTGGAGGCCAGGACATCTTCCCCAGGGAAGGTGAGGGGCAGCGA
AGGTGTGGGCGGGACGGATAGGGCCCGTCTGAAACACTTGGAGGCACCTT
CTGTCTCCTGGGAGCCCATCAGCGCCGGCCCGGCCGCCCCGGCCGCCCCG
GCGTTTCGTGGCACGAAACGGCGGGGCTTATCCGTGGAGGCCCAGCCCTC
GCCAAAGAAAGCCATTAAATCGGTGCTGGACGGCAGACCTTGGGGCGGGC
GGACGGCAATGCGTGGCGGTCCTGGGTCGGCTCTGACCATTAGCGATGCG
GAGACCTCGCCCAGTGGCAGGAAAAAAGGAAAGGCTGGGAAAAGCAGAGG
CGAGAGTCCGGGTCCCCATTCGACGGAATGCAAGGCGGACCTGGTAGCCG
TGGAGGGCTTGACCGAGGACCTTGTGGTCGAGCTCGGTTCGTGGCTGGAG
ACGTACCAAGGAATGAGGCTCCGTCTCGCCCTTCGGAAGGCTTACCGAGT
CAGCCATCTCGTCGGCCGCCTCCTTCGGGAGGGCGCCGAGGCATGGGCGG
GCACGGCGGCAAGCGGGCCGCGAACGGTGCAGGAAGGCCCATCTTTTCCC
TCCCCGGCCTTTGCGTCCACTCAAGCACTGGAAGGACAGAGAGGAGTAAT
AGAGGACTGGCCGTCACTGCAGGCCCTGCTCAAAGGCGCGCGTGGCCATC
CATCGTTCGATCCTGAGGTACTTGCCCCCGTCTTCCTCTTCTTGGAAGGA
ACCAAGCAGCCTGAGGACGGGCTGCCCGCAACGGGGCAGCTTGGCTTTCA
CAAGGCGGGAAACTGGGCCCGAAGGGAAAGAGAGGCCGGGAGAAAAGCAC
CGCACAGTGGGATGGCTGAAGACACGGAGAATGCTTGTCGAGCCAGGGCT
ACATTGCAGGGGAAGACGCTTTCGAGCGAAGTGGGGGAGTCGACAGAGGG
GCGCCTGACCGATTTTGCAACCCTATCACCGCGAGCTCCCGGCGAGCAAG
GGAAGGAAGGAGAAGTTTTTGGGGAGATACGTGGAACGTCTTGTAGAGGA
GGAGGGGAACTACGGGAGGTGGGCGAGAATCGGAAAGACGACAAGCTTTT
CTTGAAGGCGTCGTCCTCCCTTCGCATGGTAAGAGCCTCCTCCCCTTGCT
CGGAAACCTCCTCCACCTCCATCGTCATATCCTCCACAGCGGACTCGCAA
GGTGTCATGTCCACACCCACGTTGTGTGCAGGAAGAGAAGAGAAGACGAG
CTTTGCCCGGGTTCCTAATGACGTTCCATGGCGCCTCTCCGCCTTCAATG
CGGAGGAAACCCCCACTCAACACCCGTCCTCTCCTGCTCTTCTTGATTCC
CGTTCGAAGGACCAGGCTCTCGTTTTGAAGGGGACTGCGACGTTCGATCT
TCACGCCGACGAGAGCGGAGATCCCGCCGAGGAAGATTCCCCGATGAAGC
CTCCAACGCCGGACGTGAAGGCAGAAAAGGTTGGACTGAAAGGTGGAAAA
ATAGGATTAGAAACAGGAGAAGATAAGCGAGTGCCGGTGGCAGCCTTAGT
AAAGCTCTCGAATGGCGTCAAGGAGGAGTTCAAGGCTTGGTTGGCTGAGC
ACCGATCCTCCCTGACCACGGAATCGCGAGAGCACTACGCCAAGGTGGTG
GGAAACACCTTCAAAAGCCACGCTAGCACATATTGGGGGGCCAAGAAAAC
GATCAAAGCGAAGGAGGATGTGGTCGTACTCCTGCGGGAAGAACCGCTTC
GGTTGCAGCAGGCAAGGGAGATGGTGCAGAATTTGTCGTCGTATTCGGCA
GCGAGTTCCTGGGGTCATTTCATGCATTTCTTGGGGTTGGCAGTGTAGAT
ATGCGATGTAGAGGCGATGAAGAGCGGCTTGTGAGCATGGGTTGCACAAG
AAGCACAGGGAATGTGACGCGGCCATTATGAGATAGAAAAAGAGATTAGA
GGTGTCATTCTTCTTTTTTGTCATGATCTTTACGTGTATTGGAGAGCGAT
AAGGTGGAATGTCGATAGAACGCTGGATTCCAGGTCATTGTTAACGAAAC
GAACGTCTGAAATATGCAGCCAAGCCCCCGAAAAAAGATCGATGGCGAGA
TCTATCCTTCAAAGCAAGCCGAAAGCTTATTCTGCGTGTGGCACGTCTCG
CGC back to topprotein sequence of rna5156 >rna5156-protein ID=rna5156-protein|Name=rna5156|organism=Nannochloropsis gaditana|type=polypeptide|length=67bp
MILVSCRAKPRDEIENILGRAFVIYFVNRLKDAGIGRVAFTPRARRQRAC
KTGLNGVLSAFQRRDRK back to topmRNA from alignment at CM002465.1:288335..289097+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5156 ID=rna5156|Name=rna5156|organism=Nannochloropsis gaditana|type=mRNA|length=763bp|location=Sequence derived from alignment at CM002465.1:288335..289097+ (Nannochloropsis gaditana)
CAGAAGTGCCTGAGAAGCTAAGATCTCTGAAATGCTATCCTATCCTGCTA
CGCACGACAGCATCTCTAATTTTGTTTCGGACAGGTACAAGTGGAAGTAT
TGCGACTGGCGAGCTCTCTTGATTTTCAATTGCGAAGGTCAAGAGATGTG
GCGAGGTGCGGCGCCATTGCATGAGCTTTGAGCAGGTGTAGTACCGGCAA
TGTCCTCGTACAGCACAGCACTCCACGTCGATGATATTGGTCAGTTGTCG
AGCAAAGCCTCGAGACGAAATTGAAAACATTCTTGGACGTGCTTTCGTGA
TATATTTTGTCAATCGCCTGAAAGATGCTGGTATAGGAAGAGTAGCTTTT
ACCCCCCGTGCGAGACGTCAACGTGCCTGTAAAACAGGTCTTAACGGCGT
GCTATCAGCTTTTCAACGCAGAGATCGAAAATGAATGCTACGAATCAAGA
TAAAATTGATGCATGAAGCGCCCGACTGATTTCTGCTTGATGAGGGATTT
TTAAACAAATGAAGTGGTGCTCACTTTGATTGAGCCCGTTTCCACGCAGG
TATTTTGACGTGACGACCAAGGTTGCGTATTGCACAATCTGAGGGATATG
TACGTATACATAAGAAAGCAATTCTATCCTGCAAGCATGGAATATGCATC
TTTCtggaaagaaaagcaggaaaaggacgatgACAAAGCTCAACTTCGCA
GATACTTTTCAAAAGACTCTCGGCAAGGCGGACACATATCGTCACATTGT
GTGGCTCATGACC back to topCoding sequence (CDS) from alignment at CM002465.1:288335..289097+ >rna5156 ID=rna5156|Name=rna5156|organism=Nannochloropsis gaditana|type=CDS|length=204bp|location=Sequence derived from alignment at CM002465.1:288335..289097+ (Nannochloropsis gaditana)
ATGATATTGGTCAGTTGTCGAGCAAAGCCTCGAGACGAAATTGAAAACAT
TCTTGGACGTGCTTTCGTGATATATTTTGTCAATCGCCTGAAAGATGCTG
GTATAGGAAGAGTAGCTTTTACCCCCCGTGCGAGACGTCAACGTGCCTGT
AAAACAGGTCTTAACGGCGTGCTATCAGCTTTTCAACGCAGAGATCGAAA
ATGA back to top
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