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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF1995 |
| Orig transcript id | gnl|cribi|Naga_100130g2.10553.mrna |
| Orig protein id | gnl|cribi|Naga_100130g2.10553 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:235472..237392 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5140 ID=rna5140|Name=rna5140|organism=Nannochloropsis gaditana|type=mRNA|length=1476bp
TTCACAGATAATTGGACAACCACTAAAAACCATCCTTCCCTACTTTTTAT
ACTTTCGCGGACGTAAGCTTGGCTGATTTCTGCCTTCAAAGTTGGTGATC
ATAGATCTTGCTTTATACGATCCATTCTCGGCCGTGCGAGCGGTCTCGGA
CACATAATGCCAAGCTATTGAGTCATACGCACCACCACCGCCCGCAGAGT
CCCGAAACCCACTATGGTAATACTACTGGCGCGATTATGTTTGATGTGCA
CGCCCACTTGACTGCGCAAGAATTATTGCCGGATCTAGACAGATTATTGA
CGGAAGCGTATAGTGTCGGTGTCCGCGACATTGTGGTCGTCTCCGAGAAT
GTACGAGACGCAGCCTTGGTTCTAAACCTGCCGCCTTGCCAAAACGGCGT
CCGGCTGCATAAGTCGTTAGGTCTTCATCCTGAACATGCATGTCTAAAAT
CCTTGTCTACCGTGCTAAACCTCATCCGAGAGAATCACACGAAGCTGGCC
TGTGTGGGAGAAATCGGATTGGACTTCTCTCCGCACATCTTGGGACATGA
TGATGCCGAGGCTGTCAAAGCATTGCAACGGGAGTGTATGAGACAACAAG
TAGAGCTGGCATACGAACTTGATTTGCCCGTAAACGTGCATTCCCGGGGA
GCGGGGCACCACGCTTTGTCACTGCTGCGAGAAACAGTGTCAGCATCAAG
CGTTGCAGACACGCTAAAAACAACAGAGAGAGCCAGTAGTCAAACAAGAG
CTAGGATGTATGAAGGTCGGGTCCGCGCCGTGATGCACGCATGGGACGGA
AAGGCTAAATACGCAGCAGCGGCTGCTGCAGATTCCCAACAAAGCATTTA
TTTTTCGGTTCCTCCCTGTGCGTCACGCAGTCCTGTCATGATCAAGTGGA
TTGAACGCTTGCCATTGGAAAGTCTGTTACTGGAAACAGATTGTCCAGCT
TTGGCGGCTGTGAAAGGAGAGGTCAACGTGCCTCGAAATTTGCAGCTGTC
ATTGCAAGTCATAGGCGCACGTAAAGGAGTAGGACTGGATATTGTCCGAG
AGATCACGCGGAAAAATGCAGAGGAATTGTTCGGTTTGCAAGCCGGGAAG
GAATGAAGTGAAGAAATTTGTCAATCCCTTGAAAGGAAACGTTCTGGGCG
ACCTGATAATATGGCAACATGGCTACAAAAAAGATACTTTGACAGTATCT
TACTGTTTCAGACCTTGTAAAAAAAAAGGATTCTTGAAGAAGGCCGCATC
AAAATCAATTAGACCGCTGTGCATCAGGTGTTTTTAGATGTTTGGCAGGG
ACATTGCAGACCTGCGTGACTCAAAAATCGGCCCATGTCACGACTCGATT
GGATGTCTTTTTTTCCTTCAGAATCGAAAAGATCAATCGACGTCATTATT
TTCCAATGAATATATCATTCGACTGTTTGAGAACATTAATAATAATTATT
ACCTATGTGCGTCACACAATTCATCC back to topprotein sequence of rna5140 >rna5140-protein ID=rna5140-protein|Name=rna5140|organism=Nannochloropsis gaditana|type=polypeptide|length=441bp
MGTSSTLRSTTGQEPPMGGRTKFGFALIVLDLTILQGAALGLGSCTHATG
FGYAGPASSFYPQGSQGEAYLPYTTRALPRRPLRTFPTFPDTPSGLADDI
ATSVARMIEEDARHRQLEAEAAASVSTSMSLPRASPSPISPGPSLITSAP
RLRVDLQLDDIHDLSEDWSCAVSHRYLPLYEKVLLNLRNHGYHRVVAVFG
RREEASFVEKRLRQGGALDELQIEYLSRPRQESEEYAEFEGKKRRAPSFP
LGGSAKSFPKTKRIDIGNKPEMVVFFVPQNAAGSLAEVSEFQRLTAIATL
RGAPVVLVNPALTAYSHLPQGGMGEHVRPMIMSDFVPCFQAAAYRYKYNP
YLSYSIVRRGGEAGWERGPWGVFAHDARLPGSGWAYLESRFEEPYRLEVE
SRYFDSCFYIQKTAGPRGGRSRVGENPFQEVNAVPSSRHDY back to topmRNA from alignment at CM002465.1:235472..237392+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5140 ID=rna5140|Name=rna5140|organism=Nannochloropsis gaditana|type=mRNA|length=1921bp|location=Sequence derived from alignment at CM002465.1:235472..237392+ (Nannochloropsis gaditana)
ACTTCTTCTGGATCTAACATGCAACTTACCACGGATCTGTACATATGCCC
AGACACAGATTAGAAACACGCGTAGATATAGACTAGGAACCCGCGTATCG
ACTGGCTTTTGAGGGTTCTCAACCCTCAAAGTATCGAAGCTGCTCTATGG
GCACATCCTCAACACTAAGATCTACCACCGGCCAGGAGCCACCCATGGGC
GGGCGCACTAAATTTGGATTCGCGCTGATCGTGCTGGACCTGACCATCTT
ACAAGGAGCTGCATTGGGATTGGGGTCATGTACTCACGCAACTGGATTTG
GGTACGCTGGCCCTGCGTCCTCGTTTTACCCCCAAGGATCTCAGGGGGAA
GCGTACTTGCCGTACACGACCCGCGcactcccccgccgccccctgcGAAC
TTTCCCTACTTTTCCCGATACACCCTCGGGCCTGGCCGACGACATTGCTA
CCAGTGTGGCAAGGATgatagaggaggacgcaCGGCATCGTCAGCTAGAA
GCGGAAGCGGCGGCCTCGGTCTCAACCTCAATGTCCCTGCCACGGGCAAG
TCCCTCTCCCATATCACCGGGCCCCAGCCTCATCACATCAGCCCCCCGAC
TCCGCGTCGACCTTCAACTGGACGACATACATGACTTGTCCGAGGATTGG
TCCTGTGCGGTCAGTCATCGCTATTTGCCTTTATACGAGAAGGTGCTGCT
GAACTTACGAAATCATGGGTACCACCGTGTCGTGGCTGTGTttgggcgga
gggaagaagccagCTTTGTAGAAAAACGCTTGAGGCAAGGAGGTGCGTTG
GATGAGCTGCAGATAGAGTATTTGTCGAGGCCAAGACAAGAAAGCGAGGA
ATACGCTGAATTTGAGGGTAAGAAGCGCCGGGccccgtcctttcccctcg
gcGGCAGCGCCAAAAGCTTTCCCAAAACAAAGCGCATTGACATTGGGAAC
AAGCCTGAAATGGTCGTCTTTTTCGTCCCACAAAATGCGGCGGGGAGTTT
GGCGGAGGTGTCCGAGTTCCAGCGACTCACTGCCATTGCGACATTGCGGG
GGGCCCCTGTAGTGCTCGTGAATCCAGCCCTGACCGCCTACTCGCACCTC
CCGCAAGGCGGCATGGGGGAGCACGTCCGGCCCATGATCATGTCGGACTT
TGTCCCCTGTTTCCAGGCTGCGGCCTACCGTTACAAATACAACCCCTACC
TGTCGTACTCCATCGtcagaagagggggagaggcgggatGGGAACGGGGA
CCATGGGGAGTCTTTGCCCACGACGCCCGGCTGCCGGGGTCAGGGTGGGC
GTACTTGGAGTCCAGATTTGAAGAGCCGTATCGgttggaggtggaaagtA
GGTACTTCGATTCCTGTTTTTACATTCAAAAGACGGCAGGGCCGCGGGGG
GGACGGTCCCGGGTGGGGGAAAACCCGTTTCAAGAAGTCAATGCCGTTCC
TTCTTCCAGGCACGACTATTAGAGGAAAgtcgagggaaggagaaggaagc
gtgTGTGACTGTGTGGGTAATGTGAATGCTGTGTAGTTTTGGGGCGGGCT
ggagagatggaagaggaaaaagagagacaCTGCGTGACTCGCAGTGACAG
GTGTGACGTTTTCGAGcggtgcgggaaggagaggcgctGCATACCACGCA
GTGATAGATATTTTCAGGTGATCgttggggaggagagagcccGGTAAATC
AAGGCTCAAGGAGACATATTCCCCCAGGAATAAGAGCCAAAGAGAGTGAC
CGCTGTCTGGCGTTGCATAGAATAGCGAAGTAAACGAAAGCACTGCGTAT
GTAAGCCCAACATAACGGCTGTCAAACGATAAGGAGAGCCGGTTTGACAG
CGGGGGGTTGAGTCACAGGGTACTTTTACAGGGCCTGGTTGCCACAAGTT
ATCATACAAGCCCAGCCTTCC back to topCoding sequence (CDS) from alignment at CM002465.1:235472..237392+ >rna5140 ID=rna5140|Name=rna5140|organism=Nannochloropsis gaditana|type=CDS|length=1326bp|location=Sequence derived from alignment at CM002465.1:235472..237392+ (Nannochloropsis gaditana)
ATGGGCACATCCTCAACACTAAGATCTACCACCGGCCAGGAGCCACCCAT
GGGCGGGCGCACTAAATTTGGATTCGCGCTGATCGTGCTGGACCTGACCA
TCTTACAAGGAGCTGCATTGGGATTGGGGTCATGTACTCACGCAACTGGA
TTTGGGTACGCTGGCCCTGCGTCCTCGTTTTACCCCCAAGGATCTCAGGG
GGAAGCGTACTTGCCGTACACGACCCGCGcactcccccgccgccccctgc
GAACTTTCCCTACTTTTCCCGATACACCCTCGGGCCTGGCCGACGACATT
GCTACCAGTGTGGCAAGGATgatagaggaggacgcaCGGCATCGTCAGCT
AGAAGCGGAAGCGGCGGCCTCGGTCTCAACCTCAATGTCCCTGCCACGGG
CAAGTCCCTCTCCCATATCACCGGGCCCCAGCCTCATCACATCAGCCCCC
CGACTCCGCGTCGACCTTCAACTGGACGACATACATGACTTGTCCGAGGA
TTGGTCCTGTGCGGTCAGTCATCGCTATTTGCCTTTATACGAGAAGGTGC
TGCTGAACTTACGAAATCATGGGTACCACCGTGTCGTGGCTGTGTttggg
cggagggaagaagccagCTTTGTAGAAAAACGCTTGAGGCAAGGAGGTGC
GTTGGATGAGCTGCAGATAGAGTATTTGTCGAGGCCAAGACAAGAAAGCG
AGGAATACGCTGAATTTGAGGGTAAGAAGCGCCGGGccccgtcctttccc
ctcggcGGCAGCGCCAAAAGCTTTCCCAAAACAAAGCGCATTGACATTGG
GAACAAGCCTGAAATGGTCGTCTTTTTCGTCCCACAAAATGCGGCGGGGA
GTTTGGCGGAGGTGTCCGAGTTCCAGCGACTCACTGCCATTGCGACATTG
CGGGGGGCCCCTGTAGTGCTCGTGAATCCAGCCCTGACCGCCTACTCGCA
CCTCCCGCAAGGCGGCATGGGGGAGCACGTCCGGCCCATGATCATGTCGG
ACTTTGTCCCCTGTTTCCAGGCTGCGGCCTACCGTTACAAATACAACCCC
TACCTGTCGTACTCCATCGtcagaagagggggagaggcgggatGGGAACG
GGGACCATGGGGAGTCTTTGCCCACGACGCCCGGCTGCCGGGGTCAGGGT
GGGCGTACTTGGAGTCCAGATTTGAAGAGCCGTATCGgttggaggtggaa
agtAGGTACTTCGATTCCTGTTTTTACATTCAAAAGACGGCAGGGCCGCG
GGGGGGACGGTCCCGGGTGGGGGAAAACCCGTTTCAAGAAGTCAATGCCG
TTCCTTCTTCCAGGCACGACTATTAG back to top
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