|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100359g6.213.mrna |
| Orig protein id | gnl|cribi|Naga_100359g6.213 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:183980..186228 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5126 ID=rna5126|Name=rna5126|organism=Nannochloropsis gaditana|type=mRNA|length=249bp
ATGCACTTTTTTCACGTCCATGCATCGGAAGGTGGGATGCCAGGCATTGG
GACAACATTTTCAAGTCTTGAAAGGGTTAACGAAGCCGATAGAGGGATTC
TTGGAAGTTTACGTACACAGACACACAAACAAACAAACACGCTATTGCAA
TGTGATGGAAATGGTGAATGGAAAGCGGTGATTTTCCCCTCCCTTGCGAG
CTCTCTCTCTCGCGTAAGAATCGCTTTTTTTGATATTAGCATCTTATGA back to topprotein sequence of rna5126 >rna5126-protein ID=rna5126-protein|Name=rna5126|organism=Nannochloropsis gaditana|type=polypeptide|length=718bp
MPTSTPASNTDGGVQSAPSHIKKTVSATPPALVEVLTSGQAIEEGVVEKA
EDLLERDFFHDRDDVGATLDLSPWPIVHGTRGSADHTSMKQPHGERTQRF
YLYNSQRIHDEEEANGLYMGQLLAQNVGRGPGTQPAGQDAPSFFEEAGAL
IDFNIDDANAVSVITERVSDTETRLWTSTIGNIVVFRQVQNAPGLQRLAT
YDHGQNKRFHGSYAFVASNGTENAFFTTMEDKVARFVLKGNDQEGWTIVR
VSELALPSQSPLASLAQGTHTQEKKDHLVGLTLLEDGTIVSGSKGGVIMA
SRLNEAGEVVYKDHLSLNDYAEGGPAWVSNSISSTGQSIFVVTHRELMCL
DYDPSSKKLAFKWTALYQPNPAVADAWFVGRLGPGSGSTPSVTSCNGQEL
VVITDGISPMNLLWYDARTGALVAKRKVQFGADPEGEAPTTSEQSVAVDG
CKAFVVQNYMGEDRLSDDVTCISATRPGSSLRHRLGDYCLSRKDPNNPKD
LFPVRACPIAFGCSAYGAALYELAGAGSSDVRRVWARDDVSCGTSIPLLS
THPESRMAYCVGFKKGSYQWSLLGMDLDTGVDRTHLQFYETNWALNALAN
PFYAGVEATGENTMTIGAIGGVLHLSPETPGGSVGVFSTLSSDTMGGPTD
IGGGEIRLIVNKGNGERATGSMAARIQHAAVGTSIETKASIAAVAAASML
AIAFYLRKRLVASPRMPR back to topmRNA from alignment at CM002465.1:183980..186228- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5126 ID=rna5126|Name=rna5126|organism=Nannochloropsis gaditana|type=mRNA|length=2249bp|location=Sequence derived from alignment at CM002465.1:183980..186228- (Nannochloropsis gaditana)
CATGCCAACTTCGACGCCTGCATCCAATACGGACGGTGGTGTTCAAAGTG
CTCCATCACATATCAAGAAGACCGTGTCCGCCACGCCGCCGGCGCTGGTT
GAAGTGCTGACATCCGGCCAGGCTATCGAGGAGGGTGTGGTAGAAAAGGC
TGAAGATTTGCTTGAGCGTGACTTTTTCCATGATCGCGATGATGTGGGCG
CTACTCTCGATCTGTCGCCTTGGCCCATTGTGCACGGGACGCGGGGCTCG
GCTGACCACACATCCATGAAACAACCTCACGGAGAACGCACACAGCGCTT
CTACCTGTATAATTCTCAGCGTATCCATGATGAGGAGGAAGCGAACGGGT
TGTACATGGGTCAACTACTGGCGCAGAATGTGGGAAGAGGCCCGGGGACG
CAGCCAGCGGGTCAGGACGCACCGAGCTTCTTCGAGGAAGCAGGGGCTCT
GATAGATTTCAACATTGACGACGCCAACGCCGTCTCGGTGATTACAGAGC
GGGTGTCAGACACAGAAACACGTCTGTGGACTTCCACCATTGGCAACATT
GTGGTATTCCGACAGGTTCAAAACGCGCCAGGTTTACAACGGCTTGCAAC
CTACGACCACGGGCAAAATAAGCGGTTCCACGGTTCTTACGCCTTTGTGG
CCTCCAATGGAACTGAAAACGCATTTTTTACGACGATGGAAGACAAGGTA
GCACGCTTTGTATTGAAAGGCAACGATCAAGAAGGTTGGACGATCGTGCG
AGTGAGCGAGTTGGCATTGCCATCGCAGTCACCTCTGGCGTCTTTGGCTC
AAGGCACACATACCCAGGAGAAGAAAGACCATTTGGTGGGACTGACGCTC
CTGGAGGATGGAACCATCGTCAGTGGCTCGAAAGGGGGCGTGATCATGGC
ATCGCGTTTGAATGAGGCGGGGGAGGTTGTCTACAAAGATCACCTGTCTC
TGAACGACTACGCCGAAGGAGGTCCGGCGTGGGTGTCCAACTCCATCTCC
TCCACCGGCCAATCCATCTTCGTCGTGACACACCGGGAACTCATGTGCCT
GGATTACGATCCTTCCTCCAAGAAGCTAGCCTTCAAATGGACGGCCTTGT
ATCAGCCCAACCCCGCCGTTGCCGATGCCTGGTTCGTGGGCCGGCTGGGA
CCCGGGTCTGGCTCCACTCCCTCGGTGACCTCGTGCAATGGCCAAGAACT
GGTGGTGATTACCGACGGCATCTCCCCCATGAATTTGTTGTGGTACGACG
CGCGCACGGGTGCCTTAGTGGCCAAGCGAAAGGTGCAATTCGGGGCCGAT
CCGGAGGGGGAAGCACCTACGACCAGCGAGCAATCCGTCGCAGTGGACGG
ATGTAAGGCCTTCGTCGTGCAGAACTACATGGGGGAGGATCGATTGTCGG
ACGACGTGACCTGCATTTCGGCCACCCGGCCGGGGAGCAGTCTGCGCCAT
CGGCTGGGCGACTATTGCCTGTCCCGCAAGGACCCGAACAACCCAAAAGA
CCTTTTCCCTGTGCGGGCGTGTCCGATTGCCTTTGGGTGCTCGGCTTATG
GTGCAGCCCTTTATGAGCTGGCGGGAGCAGGGTCTTCCGATGTCCGCCGT
GTATGGGCCCGGGATGACGTGAGTTGTGGGACGTCGATACCGTTGCTGTC
CACCCACCCCGAGAGCCGCATGGCGTACTGCGTGGGATTCAAGAAAGGCA
GCTACCAATGGTCGCTATTGGGGATGGATTTGGACACAGGGGTGGACAGG
ACGCATTTGCAATTCTACGAAACGAATTGGGCGTTGAACGCGCTGGCCAA
CCCTTTCTACGCGGGCGTGGAGGCCACGGGGGAGAACACGATGACGATTG
GGGCCATTGGCGGGGTTCTCCATCTTTCGCCCGAGACACCTGGGGGCAGC
GTCGGGGTTTTTTCGACTCTTTCGTCCGACACGATGGGGGGCCCGACGGA
CATCGGAGGGGGAGAGATCCGATTAATTGTTAACAAGGGGAACGGGGAAC
GAGCCACGGGATCGATGGCGGCCAGGATCCAGCACGCCGCGGTGGGCACA
TCGATCGAGACGAAGGCTAGCATTGCTGCAGTGGCTGCGGCATCTATGCT
CGCGATTGCATTCTATCTGCGTAAACGTTTGGTAGCGTCACCCCGGATGC
CCCGGTAGCTGCTACGTCATTTACTGCAACTCGTTAACAAATTCTATATT
TAAATAAAACTTGGCAAATTAAAAAAAAAGTATCGTGGGTGTGCATGGT back to topCoding sequence (CDS) from alignment at CM002465.1:183980..186228- >rna5126 ID=rna5126|Name=rna5126|organism=Nannochloropsis gaditana|type=CDS|length=2157bp|location=Sequence derived from alignment at CM002465.1:183980..186228- (Nannochloropsis gaditana)
ATGCCAACTTCGACGCCTGCATCCAATACGGACGGTGGTGTTCAAAGTGC
TCCATCACATATCAAGAAGACCGTGTCCGCCACGCCGCCGGCGCTGGTTG
AAGTGCTGACATCCGGCCAGGCTATCGAGGAGGGTGTGGTAGAAAAGGCT
GAAGATTTGCTTGAGCGTGACTTTTTCCATGATCGCGATGATGTGGGCGC
TACTCTCGATCTGTCGCCTTGGCCCATTGTGCACGGGACGCGGGGCTCGG
CTGACCACACATCCATGAAACAACCTCACGGAGAACGCACACAGCGCTTC
TACCTGTATAATTCTCAGCGTATCCATGATGAGGAGGAAGCGAACGGGTT
GTACATGGGTCAACTACTGGCGCAGAATGTGGGAAGAGGCCCGGGGACGC
AGCCAGCGGGTCAGGACGCACCGAGCTTCTTCGAGGAAGCAGGGGCTCTG
ATAGATTTCAACATTGACGACGCCAACGCCGTCTCGGTGATTACAGAGCG
GGTGTCAGACACAGAAACACGTCTGTGGACTTCCACCATTGGCAACATTG
TGGTATTCCGACAGGTTCAAAACGCGCCAGGTTTACAACGGCTTGCAACC
TACGACCACGGGCAAAATAAGCGGTTCCACGGTTCTTACGCCTTTGTGGC
CTCCAATGGAACTGAAAACGCATTTTTTACGACGATGGAAGACAAGGTAG
CACGCTTTGTATTGAAAGGCAACGATCAAGAAGGTTGGACGATCGTGCGA
GTGAGCGAGTTGGCATTGCCATCGCAGTCACCTCTGGCGTCTTTGGCTCA
AGGCACACATACCCAGGAGAAGAAAGACCATTTGGTGGGACTGACGCTCC
TGGAGGATGGAACCATCGTCAGTGGCTCGAAAGGGGGCGTGATCATGGCA
TCGCGTTTGAATGAGGCGGGGGAGGTTGTCTACAAAGATCACCTGTCTCT
GAACGACTACGCCGAAGGAGGTCCGGCGTGGGTGTCCAACTCCATCTCCT
CCACCGGCCAATCCATCTTCGTCGTGACACACCGGGAACTCATGTGCCTG
GATTACGATCCTTCCTCCAAGAAGCTAGCCTTCAAATGGACGGCCTTGTA
TCAGCCCAACCCCGCCGTTGCCGATGCCTGGTTCGTGGGCCGGCTGGGAC
CCGGGTCTGGCTCCACTCCCTCGGTGACCTCGTGCAATGGCCAAGAACTG
GTGGTGATTACCGACGGCATCTCCCCCATGAATTTGTTGTGGTACGACGC
GCGCACGGGTGCCTTAGTGGCCAAGCGAAAGGTGCAATTCGGGGCCGATC
CGGAGGGGGAAGCACCTACGACCAGCGAGCAATCCGTCGCAGTGGACGGA
TGTAAGGCCTTCGTCGTGCAGAACTACATGGGGGAGGATCGATTGTCGGA
CGACGTGACCTGCATTTCGGCCACCCGGCCGGGGAGCAGTCTGCGCCATC
GGCTGGGCGACTATTGCCTGTCCCGCAAGGACCCGAACAACCCAAAAGAC
CTTTTCCCTGTGCGGGCGTGTCCGATTGCCTTTGGGTGCTCGGCTTATGG
TGCAGCCCTTTATGAGCTGGCGGGAGCAGGGTCTTCCGATGTCCGCCGTG
TATGGGCCCGGGATGACGTGAGTTGTGGGACGTCGATACCGTTGCTGTCC
ACCCACCCCGAGAGCCGCATGGCGTACTGCGTGGGATTCAAGAAAGGCAG
CTACCAATGGTCGCTATTGGGGATGGATTTGGACACAGGGGTGGACAGGA
CGCATTTGCAATTCTACGAAACGAATTGGGCGTTGAACGCGCTGGCCAAC
CCTTTCTACGCGGGCGTGGAGGCCACGGGGGAGAACACGATGACGATTGG
GGCCATTGGCGGGGTTCTCCATCTTTCGCCCGAGACACCTGGGGGCAGCG
TCGGGGTTTTTTCGACTCTTTCGTCCGACACGATGGGGGGCCCGACGGAC
ATCGGAGGGGGAGAGATCCGATTAATTGTTAACAAGGGGAACGGGGAACG
AGCCACGGGATCGATGGCGGCCAGGATCCAGCACGCCGCGGTGGGCACAT
CGATCGAGACGAAGGCTAGCATTGCTGCAGTGGCTGCGGCATCTATGCTC
GCGATTGCATTCTATCTGCGTAAACGTTTGGTAGCGTCACCCCGGATGCC
CCGGTAG back to top
|