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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100572g2.3398.mrna |
| Orig protein id | gnl|cribi|Naga_100572g2.3398 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:152380..155246 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5112 ID=rna5112|Name=rna5112|organism=Nannochloropsis gaditana|type=mRNA|length=3315bp
TGTCGTAGGTCGTGTTGTGATTAATAATTGATGCTTATTCATGAGTGCTG
CTTCGCGGAAACGTCAACGGATATGTCATGAAGAGTAATCGTAGGCATTT
TCAAGGGTTTGTGCGTTCACAAACGTTGCAAAAAAGGAATCGCTACCTCT
ACAAGTCGGCAAGGACTTCGGTTGTGCTGATGTCTGATTACATATATTTG
CGATACACGCAACAGATTTCTACGCTGATGCGGTCTTACAAGCAATGGAA
TGAGACCCTCTATGCTGCGAGTGCCTTTTCCCTATGACTATCTGTCTGTG
CAACGGGAGCTTCAGCACCAAGGAAGATTGAGCGTTTCCTGAAAGAGAAA
GCACCCCTGCACATAAGGGAAGACATACTTCTTCAAAATTGTTGAGAAAG
ATTGTTGCCCATCGGGGCAACCACGAATGCAAGAGCAGCCATGGCAAGTT
TTCTTGGGAATATTACCTTCTTAGACCTGCTCTTGCTGGCCATTATTTTA
TCCTATATTTGGCTATGCCCCTACAACAAGGTGGAAGAAAGCTTCAACAC
CCAGGCTACCCATGACATCCTCTTCCTTCCTGCCTTCCCCCCTTCCTCCC
TCGCCGCGTACGATCACCGGTCCTTCCCCGGGGCCGTCCCCCGCACGTTC
TGGGGACCCCTCCTCCTTGCCCTACCCCTACACCTTGTGCTCCCCCTCCT
CCCTCCCTCCCTCCGCCCCGCGACCAAGCTACCGGTCCAACTGGGGGTGC
GTGTCGTTCTGGCCCTCTTCCTCTGGGCAGCTCTCCTCCGCTTCCGACAA
GCGGCTACTTTCCGCTTCGGTCCCCGGACGGGGCAATGCCTCCTCCTCCT
CACCCTTTCCCAGTTCCATCTCCCTTTCTATATGTCCCGGACGCTGCCGA
ACACCTTCGCCCTAGGCTTCGTCCTCCTTGCGTATGCCTCCCTCCTGTAC
CGTGCCCCCACCCGCTGTCTCTTCTACCTCGCCGGGGCCACGGCCCTCTT
CCGGTGCGACGTCATCGTCCTGGCGTTGCCCCTCCTTCTTCTTCTCCTCC
TCCGCCGGCACCTTAAGCTGTCCCAGCTCCTCCTCCTCGGCGCCCTTTTC
GGCGGGACAGGGATCGTCGTGAGCGTCCTCCTCGACTCGTACTTCTGGCG
CGCAGGCAGGGAAGAGAAAAGCTCCGCATTCCCTTTGCTTTGGCCGGAGG
GCGTCGTCCTCTTCTTCAATACCGTCGAGAACAGATCCATCGAATGGGGC
GCAGCCCCCTGGCACTGGTACGTCTCCTCCGCCCTCCCTCGCTCCCTCTT
AACCTCCCCCCTCCTTTGGCCCTACTGCTTTCTGGCCCGACGGAAGGAAA
GGAGGGGCACTGGAGTCGAGGGGGCGAAAGGGGAGAGCCTGGACGAGGCA
GACAAGGACCGAGGTGTCCCTGTCTCCGTCCCCCTCCCCTTCCTCCCTCA
GCCCCTCCGCCTCGACCTCGAGCCTTTCCTCCTCCTCTTCCTCCCCGTGG
CCCTCTACCTCGCCCTGTACTCTTTCTTGCCGCACAAGGAGCTGCGCTTC
ATCTTTCCGGCCTTGCCCATTTTGAACTTGTGTGCAGCCATTGGGTGGGC
GCGATTGGAGGAAAGGGAGGGGGGTCGGAGGGGCGCAATGGGCCAGACAG
GGAGACCAGGTCTTGGAGTGGAGACAAGCGGAACGAGGATGTCGCTAAGG
AAACGGAAGAAGGAGGGAGTCGAGGCGGAGACACAAGAGGCAAGAAAGGC
ATGTGGGGTGAAGCATCAGCCAAAGCAGCCGGAAGGGGGAGAGAAGGCCG
TGGGAGCGATCCTTCCCTCTTCCCCTTCCTCCCGGCCCCTGTCATTCCTC
CTTCGTCACGCTTCCTTGTTGGGATGGCTGGTGGTCACGAGCAGCCTGCT
CCCCCTCCCTCTCTTCTTGGCCGCAGCCCGCCGGAACTACCCCGGAGGGG
ACGGCCTGGCCCGTTTCCATGCTCACATTTTCGCGCCAAATTCCTCGCAC
GCTGACGCGGTCTATATTACACATGGAGGGAGGGAGGGAGAGAGGGGGGG
GAAGGACAGGGTGGTGAAGCTGCACATAGGGGTGCTGGCGGCTCAAACAG
GGGTCTCGCGCTTTGGGGAAGTGTGGGAGAAGGTCGGATCTGAGGGAGGA
ACAGGGAAAGGGGTGGGTGTGCGGTACAGTAAGGAAGAGGGACTGTCGTC
GTCGGCACGGATGCGCCGCTTCGACTACCTGCTGGCCGAGAGAGAGGAGG
TGGAGGAAATGACGAGGAGGGCGGAGAGGAAGGAGGGCGGGACGGAGGTC
ACGGACGTGGGCGGGGAGCGCCGGCATTGTGAGGTGGTGGAGTGGGTGCA
AGGCCGACCTCGCCTTCGAAAATGGCGCGAAAGCTTACACATGCTCGGCT
CGTACGCCGCCAGCCTCTGGGACCGCGGCGGCGGCAGCATGAGCATTCAC
GCCCGGAAACTTATGGGAGGGAAGAGCGGAGGTCTCTCGCAACCAGTATG
CTGGGAAGACGTATTGGTGGAAACCGAAGCAGTGTTGGCTCTTGTCGCGT
GTCGGGTGAGGGACGCGGGAGGGGAGGAAGCAGATGACGAGGAGAAGGAG
TTCGGGGGAGGAGAAGAGAAGACGGGCGAATGAATATCCCATTGTGCAAA
AAACTTTCTCTTGGCGAGCCCGGAGGACACTTTTAATTAAAACACATGCC
TTTGCTTCGTGCGCTCGCTCTCGCAAGTTCGCCACGCGTCAAAACAACGG
GCTCAGTGCTTCGTGCGCGAGGCAATCTTCAAAAACGCCGGGGACGGCCC
CTTCCAGCACCACGCCGTCACGTTCATGATAAATCATCAGATGCCAAATA
AACGTGCGTTTTCCAGCGAATTTTACAAAACACCTATGGTGGTCTCCGGA
CCGCTTGGGGCGCACCCATTCGCACCGTGAAGCATCTTTAAAACACGGTT
ATACATAGATATAGAGTGTGAAAGAGAGAGAAATTTATAGAGGGTCAAGG
ATATATATATATATACACATGTATATATACATGCATACATACATACGTAT
AGGGACCGCCAGGTATTTCCCGTGTTATTTCCTTACAGCCTGCACACTCT
TGCGTAGCTTGGCCTCTTTGTCCGTTGGCTCTGCCAAACCCAGACGCACT
TCCTGATAAATAATCTCCACCTCGTTGCACAACGCAATCAAGAGAGGAGG
AACCGAGATGTTTTCCCTCCCGTCGCCTTCCCCGCTGCGGCCGCGAAGCC
CGGCGGCGTACGCCGCCAGAGCCACCAATTTCCCCGCATCCAATGATTCA
TTGAACGCCAGGGGG back to topprotein sequence of rna5112 >rna5112-protein ID=rna5112-protein|Name=rna5112|organism=Nannochloropsis gaditana|type=polypeptide|length=675bp
MASEVNAYLAGLSGAETSWFTFLTAFANLPPSQRPSDVRLRLLHRVYKDL
SSKTSWEDVRIVWRDICDSGSWKHTPFYEGGAFFVEGIFTRRPRESREAA
VAEAKKKLVKKKKANFKKMLKKKKEERKLKREKRIAEEKMKQTEAQYVEK
GEDEAGEVKEDMEKEGNAEELGEDEIRKILEECGNEDAADECGRIGGMKR
PRPTQEEGKEAKAEMVEQGGKKRVEVEDDDDDEGNGTEEDPQEKEDEEKE
DKGTRQEGLTEERGLSRPRNGSDGQGETGTGQEEVEEEVGREDGHDKDVR
RVEGQRGSDGEGWTAMEMEEGEEDGKEEEVPGSSSRDHPVEQKPHTSLSL
AMVGVTLSPTGSTDTTRDPLAAAGGGENLLAAEGDEASRAGVPRGGRPTE
VGIDSSFPSTHVPAKGNGALTPTPVCETAVPATPQTASATAAGPSLAMTY
QSSASRADAYCDRPAGAIPAPAQGARSPLSSQPAEPPTFPPSLAPSLPPS
LPSCPPPEGIGVDGTGLATEAQTGAEHTAIMSQLNASPSSRDPSSTTPAS
SRPSQSAQKRAKKAGTSLPSFPPALSPSSPAPSMTPLLPPVPAAVFPLAF
NESLDAGKLVALAAYAAGLRGRSGEGDGRENISVPPLLIALCNEVEIIYQ
EVRLGLAEPTDKEAKLRKSVQAVRK back to topmRNA from alignment at CM002465.1:152380..155246- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5112 ID=rna5112|Name=rna5112|organism=Nannochloropsis gaditana|type=mRNA|length=2867bp|location=Sequence derived from alignment at CM002465.1:152380..155246- (Nannochloropsis gaditana)
CATTTTTAGCTTAAGAAAGACGCGTTCAGACGTGTGGGATAGTGAACAAT
TTGTTAAAATATCCATCCTCCGCTCCCCATCATCCCACAGGCTTCATTAG
CATTTTCGCATGGCTAGCGAGGTCAATGCATACCTGGCCGGTCTGTCTGG
CGCTGAAACCTCTTGGTTTACCTTTCTGACAGCCTTCGCTAACCTCCCGC
CTTCGCAAAGGCCCTCGGACGTCCGCCTTCGGCTCCTGCATCGCGTGTAT
AAGGATTTAAGCAGCAAGACAAGTTGGGAAGACGTGAGAATCGTATGGCG
GGACATCTGCGATAGCGGTTCGTGGAAGCATACGCCTTTCTATGAAGGAG
GTGCATTTTTCGTTGAGGGGATTTTCACGCGTCGCCCTCGAGAGTCTCGA
GAAGCCGCCGTGGCGGAGGCCAAAAAGAAGCTAGTGAAAAAGAAGAAAGC
AAATTTCAAGAAAATGCTCAAGAAGAAGAAAGAAGAGAGGAAATTGAAGC
GTGAAAAGCGGATAGCTGAAGAAAAGATGAAACAAACGGAAGCACAATAT
GTAGAGAAAGGAGAAGACGAGGCAGGCGAGGTGAAGGAAGATATGGAGAA
AGAGGGAAACGCCGAGGAGCTGGGAGAAGATGAAATCCGAAAAATTTTGG
AAGAATGTGGGAACGAAGATGCCGCGGATGAGTGTGGAAGAATAGGAGGC
ATGAAACGCCCGAGGCCAACACAGGAGGAGGGGAAAGAAGCAAAGGCGGA
GATGGTGGAACAAGGGGGGAAAAAAAGAGTAGAAGTAGAAGATGATGATG
ATGATGAAGGAAACGGTACAGAAGAAGACCCACAAGAAAAGGAAGATGAG
GAGAAGGAGGATAAGGGAACGCGTCAGGAGGGGCTGACTGAAGAGAGGGG
TCTCAGCCGGCCGCGGAACGGGTCCGACGGCCAAGGGGAGACAGGCACTG
GACAAGAGGAAGTCGAAGAGGAGGTAGGGAGGGAGGACGGCCATGATAAG
GACGTACGTCGGGTGGAGGGACAGCGGGGAAGCGATGGGGAAGGATGGAC
GGCGATGGAGATGGAGGAAGGAGAAGAGGACGGGAAGGAGGAAGAGGTGC
CCGGTAGTAGTAGTAGGGACCACCCGGTCGAGCAGAAGCCGCACACGAGC
CTTTCCTTGGCCATGGTAGGCGTGACGCTAAGCCCGACAGGGTCAACAGA
CACGACGCGCGATCCGCTCGCCGCCGCTGGAGGAGGGGAGAATCTGCTGG
CCGCAGAGGGGGACGAAGCCTCGAGGGCAGGCGTCCCAAGAGGCGGCAGA
CCGACGGAAGTAGGGATAGACTCGTCATTCCCATCCACCCATGTGCCTGC
CAAGGGCAATGGAGCATTAACCCCAACGCCGGTCTGCGAAACTGCGGTCC
CAGCGACCCCACAAACGGCGTCTGCGACGGCCGCAGGACCCTCCCTGGCG
ATGACCTACCAGTCCTCCGCGAGCAGAGCGGACGCGTACTGTGATAGACC
TGCGGGAGCCATTCCAGCACCTGCTCAGGGCGCTCGCAGTCCTCTGTCCA
GTCAACCGGCAGAGCCTCCCACCTTCCCTCCCTCCCTCGCTCCCTCCCTC
CCTCCCTCCCTCCCGTCCTGCCCTCCACCCGAAGGCATCGGGGTTGACGG
GACAGGCCTCGCGACGGAGGCACAAACCGGGGCAGAACACACGGCGATAA
TGTCCCAGCTGAATGCAAGTCCTTCCTCACGAGACCCCTCATCCACGACC
CCAGCGTCCTCTCGCCCTTCACAGAGCGCTCAGAAGCGCGCCAAAAAGGC
GGGCACATCACTTCCTTCCTTTCCCCCTGCCCTCTCCCCTTCTTCCCCTG
CTCCCTCCATGACCCCACTCCTTCCCCCTGTGCCTGCGGCCGTTTTCCCC
CTGGCGTTCAATGAATCATTGGATGCGGGGAAATTGGTGGCTCTGGCGGC
GTACGCCGCCGGGCTTCGCGGCCGCAGCGGGGAAGGCGACGGGAGGGAAA
ACATCTCGGTTCCTCCTCTCTTGATTGCGTTGTGCAACGAGGTGGAGATT
ATTTATCAGGAAGTGCGTCTGGGTTTGGCAGAGCCAACGGACAAAGAGGC
CAAGCTACGCAAGAGTGTGCAGGCTGTAAGGAAATAACACGGGAAATACC
TGGCGGTCCCTATACGTATGTATGTATGCATGTATATATACATGTGTATA
TATATATATATCCTTGACCCTCTATAAATTTCTCTCTCTTTCACACTCTA
TATCTATGTATAACCGTGTTTTAAAGATGCTTCACGGTGCGAATGGGTGC
GCCCCAAGCGGTCCGGAGACCACCATAGGTGTTTTGTAAAATTCGCTGGA
AAACGCACGTTTATTTGGCATCTGATGATTTATCATGAACGTGACGGCGT
GGTGCTGGAAGGGGCCGTCCCCGGCGTTTTTGAAGATTGCCTCGCGCACG
AAGCACTGAGCCCGTTGTTTTGACGCGTGGCGAACTTGCGAGAGCGAGCG
CACGAAGCAAAGGCATGTGTTTTAATTAAAAGTGTCCTCCGGGCTCGCCA
AGAGAAAGTTTTTTGCACAATGGGATATTCATTCGCCCGTCTTCTCTTCT
CCTCCCCCGAACTCCTTCTCCTCGTCATCTGCTTCCTCCCCTCCCGCGTC
CCTCACCCGACACGCGACAAGAGCCAACACTGCTTCGGTTTCCACCAATA
CGTCTTCCCAGCATACTGGTTGCGAGAGACCTCCGCTCTTCCCTCCCATA
AGTTTCCGGGCGTGAATGCTCATGCTGCCGCCGCCGCGGTCCCAGAGGCT
GGCGGCGTACGAGCCGAGCATGTGTAAGCTTTCGCGCCATTTTCGAAGGC
GAGGTCGGCCTTGCACC back to topCoding sequence (CDS) from alignment at CM002465.1:152380..155246- >rna5112 ID=rna5112|Name=rna5112|organism=Nannochloropsis gaditana|type=CDS|length=2028bp|location=Sequence derived from alignment at CM002465.1:152380..155246- (Nannochloropsis gaditana)
ATGGCTAGCGAGGTCAATGCATACCTGGCCGGTCTGTCTGGCGCTGAAAC
CTCTTGGTTTACCTTTCTGACAGCCTTCGCTAACCTCCCGCCTTCGCAAA
GGCCCTCGGACGTCCGCCTTCGGCTCCTGCATCGCGTGTATAAGGATTTA
AGCAGCAAGACAAGTTGGGAAGACGTGAGAATCGTATGGCGGGACATCTG
CGATAGCGGTTCGTGGAAGCATACGCCTTTCTATGAAGGAGGTGCATTTT
TCGTTGAGGGGATTTTCACGCGTCGCCCTCGAGAGTCTCGAGAAGCCGCC
GTGGCGGAGGCCAAAAAGAAGCTAGTGAAAAAGAAGAAAGCAAATTTCAA
GAAAATGCTCAAGAAGAAGAAAGAAGAGAGGAAATTGAAGCGTGAAAAGC
GGATAGCTGAAGAAAAGATGAAACAAACGGAAGCACAATATGTAGAGAAA
GGAGAAGACGAGGCAGGCGAGGTGAAGGAAGATATGGAGAAAGAGGGAAA
CGCCGAGGAGCTGGGAGAAGATGAAATCCGAAAAATTTTGGAAGAATGTG
GGAACGAAGATGCCGCGGATGAGTGTGGAAGAATAGGAGGCATGAAACGC
CCGAGGCCAACACAGGAGGAGGGGAAAGAAGCAAAGGCGGAGATGGTGGA
ACAAGGGGGGAAAAAAAGAGTAGAAGTAGAAGATGATGATGATGATGAAG
GAAACGGTACAGAAGAAGACCCACAAGAAAAGGAAGATGAGGAGAAGGAG
GATAAGGGAACGCGTCAGGAGGGGCTGACTGAAGAGAGGGGTCTCAGCCG
GCCGCGGAACGGGTCCGACGGCCAAGGGGAGACAGGCACTGGACAAGAGG
AAGTCGAAGAGGAGGTAGGGAGGGAGGACGGCCATGATAAGGACGTACGT
CGGGTGGAGGGACAGCGGGGAAGCGATGGGGAAGGATGGACGGCGATGGA
GATGGAGGAAGGAGAAGAGGACGGGAAGGAGGAAGAGGTGCCCGGTAGTA
GTAGTAGGGACCACCCGGTCGAGCAGAAGCCGCACACGAGCCTTTCCTTG
GCCATGGTAGGCGTGACGCTAAGCCCGACAGGGTCAACAGACACGACGCG
CGATCCGCTCGCCGCCGCTGGAGGAGGGGAGAATCTGCTGGCCGCAGAGG
GGGACGAAGCCTCGAGGGCAGGCGTCCCAAGAGGCGGCAGACCGACGGAA
GTAGGGATAGACTCGTCATTCCCATCCACCCATGTGCCTGCCAAGGGCAA
TGGAGCATTAACCCCAACGCCGGTCTGCGAAACTGCGGTCCCAGCGACCC
CACAAACGGCGTCTGCGACGGCCGCAGGACCCTCCCTGGCGATGACCTAC
CAGTCCTCCGCGAGCAGAGCGGACGCGTACTGTGATAGACCTGCGGGAGC
CATTCCAGCACCTGCTCAGGGCGCTCGCAGTCCTCTGTCCAGTCAACCGG
CAGAGCCTCCCACCTTCCCTCCCTCCCTCGCTCCCTCCCTCCCTCCCTCC
CTCCCGTCCTGCCCTCCACCCGAAGGCATCGGGGTTGACGGGACAGGCCT
CGCGACGGAGGCACAAACCGGGGCAGAACACACGGCGATAATGTCCCAGC
TGAATGCAAGTCCTTCCTCACGAGACCCCTCATCCACGACCCCAGCGTCC
TCTCGCCCTTCACAGAGCGCTCAGAAGCGCGCCAAAAAGGCGGGCACATC
ACTTCCTTCCTTTCCCCCTGCCCTCTCCCCTTCTTCCCCTGCTCCCTCCA
TGACCCCACTCCTTCCCCCTGTGCCTGCGGCCGTTTTCCCCCTGGCGTTC
AATGAATCATTGGATGCGGGGAAATTGGTGGCTCTGGCGGCGTACGCCGC
CGGGCTTCGCGGCCGCAGCGGGGAAGGCGACGGGAGGGAAAACATCTCGG
TTCCTCCTCTCTTGATTGCGTTGTGCAACGAGGTGGAGATTATTTATCAG
GAAGTGCGTCTGGGTTTGGCAGAGCCAACGGACAAAGAGGCCAAGCTACG
CAAGAGTGTGCAGGCTGTAAGGAAATAA back to top
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