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Properties
| Property Name | Value |
|---|
| Product | GPI mannosyltransferase |
| Orig transcript id | gnl|cribi|Naga_100572g3.3399.mrna |
| Orig protein id | gnl|cribi|Naga_100572g3.3399 |
| Gene | ALG12 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:149815..153350 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5111 ID=rna5111|Name=rna5111|organism=Nannochloropsis gaditana|type=mRNA|length=734bp
CCGTGAGATGTCCCGCATATTCGGAGGGCTTTTTCTGTCTCGTAAGCTGT
AATTTTGCCGCGAAACCCGTATTCAGGTACCGGGAGAGCGCTTTGTCAAA
GATCATGCAGGCAGGATTTGGCATCAGGCGTGAAGACTTGACTTTCGGCA
TACCAAGAATGAGGAACATTAAGTTACGGCATTCGTTTCCTTTTCATCGT
ACATATTACTCAGCACGGTCACGATTCACGGTTTTGTACGCATGCGGGCT
GAAAGCTTCTTCGATCCGGAAACAAGGTGGATGAAAGACATGCATCCAGG
AAGGATCTCGATTTAGTCGACCTGGCAGGCCTTGAGATCCGGCACTCTAC
CTTTGCACATTTCTGATGTCGCTTCTCACATCCGTCCACACAATGAGACG
GTCTTACCTGACGTCTTTCCTCCTCCTGCTGGGCGTGACTTTTATCAACC
TATTGGTACTTATATGCTGGACGCATTTCTCAGGCTCGACGCACGAACCC
TATTTCCATCTGCCACGACCATGGGATCCGGCCTCGAAGACAGCGGGAGG
GGCACAGGAGGGAGGAGTTTCGAGGAGGACGGCAGCAGTATCCAAGGAGG
AGGTCGTCCGCGTGTTCATGGATTTCCCACAGTCGCGGGCGAGTTGGGGC
ATTGCCCACAATCGTGCTTTGGAAAGCATCCTCAGTCATTATCCGCGAGC
GGAAGTGGTGGTTTTTGGTAACGGTTCCAAGTAA back to topprotein sequence of rna5111 >rna5111-protein ID=rna5111-protein|Name=rna5111|organism=Nannochloropsis gaditana|type=polypeptide|length=730bp
MASFLGNITFLDLLLLAIILSYIWLCPYNKVEESFNTQATHDILFLPAFP
PSSLAAYDHRSFPGAVPRTFWGPLLLALPLHLVLPLLPPSLRPATKLPVQ
LGVRVVLALFLWAALLRFRQAATFRFGPRTGQCLLLLTLSQFHLPFYMSR
TLPNTFALGFVLLAYASLLYRAPTRCLFYLAGATALFRCDVIVLALPLLL
LLLLRRHLKLSQLLLLGALFGGTGIVVSVLLDSYFWRAGREEKSSAFPLL
WPEGVVLFFNTVENRSIEWGAAPWHWYVSSALPRSLLTSPLLWPYCFLAR
RKERRGTGVEGAKGESLDEADKDRGVPVSVPLPFLPQPLRLDLEPFLLLF
LPVALYLALYSFLPHKELRFIFPALPILNLCAAIGWARLEEREGGRRGAM
GQTGRPGLGVETSGTRMSLRKRKKEGVEAETQEARKACGVKHQPKQPEGG
EKAVGAILPSSPSSRPLSFLLRHASLLGWLVVTSSLLPLPLFLAAARRNY
PGGDGLARFHAHIFAPNSSHADAVYITHGGREGERGGKDRVVKLHIGVLA
AQTGVSRFGEVWEKVGSEGGTGKGVGVRYSKEEGLSSSARMRRFDYLLAE
REEVEEMTRRAERKEGGTEVTDVGGERRHCEVVEWVQGRPRLRKWRESLH
MLGSYAASLWDRGGGSMSIHARKLMGGKSGGLSQPVCWEDVLVETEAVLA
LVACRVRDAGGEEADDEEKEFGGGEEKTGE back to topmRNA from alignment at CM002465.1:149815..153350+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5111 ID=rna5111|Name=rna5111|organism=Nannochloropsis gaditana|type=mRNA|length=3536bp|location=Sequence derived from alignment at CM002465.1:149815..153350+ (Nannochloropsis gaditana)
TGTCGTAGGTCGTGTTGTGATTAATAATTGATGCTTATTCATGAGTGCTG
CTTCGCGGAAACGTCAACGGATATGTCATGAAGAGTAATCGTAGGCATTT
TCAAGGGTTTGTGCGTTCACAAACGTTGCAAAAAAGGAATCGCTACCTCT
ACAAGTCGGCAAGGACTTCGGTTGTGCTGATGTCTGATTACATATATTTG
CGATACACGCAACAGATTTCTACGCTGATGCGGTCTTACAAGCAATGGAA
TGAGACCCTCTATGCTGCGAGTGCCTTTTCCCTATGACTATCTGTCTGTG
CAACGGGAGCTTCAGCACCAAGGAAGATTGAGCGTTTcctgaaagagaaa
gcaCCCCTGCACATAAGGGAAGACATACTTCTTCAAAATTGTTGAGAAAG
ATTGTTGCCCATCGGGGCAACCACGAATGCAAGAGCAGCCATGGCAAGTT
TTCTTGGGAATATTACCTTCTTAGACCTGCTCTTGCTGGCCATTATTTTA
TCCTATATTTGGCTATGCCCCTACAACAAGGTACATTGGACGTAAAAGGA
CCCGGTTGGTTTTGCGATGTATCATTCTAGGCTGAGTGCTGGCGTATTgc
aggccctctcccttctttaatcctttctctccttactttcctcgtcctta
gCCCGACTACCTTCCATTCCAATCTCCCTTCACTTTGCTTTCCTTCACCG
TTCATTCTTCCAACGCCATCacgtttcccttcctctcctcccccgtccta
GGTGGAAGAAAGCTTCAACACCCAGGCTACCCATgacatcctcttccttc
ctgccttccccccttcctccctcgccgcgtACGATCACCGGTCCTTCCCC
GGGGCCGTCCCCCGCACGTTCTGgggacccctcctccttgccctacCCCT
ACACCTtgtgctccccctcctccctccctccctccgccccgcgaCCAAGC
TACCGGTCCAACTGGGGGTGCGTGTCGTTctggccctcttcctctgggca
gctctcctccgcttccgacAAGCGGCTACTTTCCGCTTCGGTCCCCGGAC
GGGGcaatgcctcctcctcctcaccctttcccAGTTCCATCTCCCTTTCT
ATATGTCCCGGACGCTGCCGAACACCTTCGCCCTaggcttcgtcctcctt
gcgtatgcctccctcctgtacCGTGCCCCCACCCGCTGTCTCTTCTACCT
CGCCGGGGCCACGGCCCTCTTCCGGTGCGACGTCATCGTCCTGGcgttgc
ccctccttcttcttctcctcctccgccggcaccttAAGCTgtcccagctc
ctcctcctcggcgcccttTTCGGCGGGACAGGGATCGTCGTgagcgtcct
cctcgactcGTACTTCTGGCGCGCAggcagggaagagaaaagctCCGCAT
TCCCTTTGCTTTGGCCGGAgggcgtcgtcctcttcttcaatACCGTCGAG
AACAGATCCATCGAATGGGGCGCAGCCCCCTGGCACTGGtacgtctcctc
cgccctccctcgctccctcttaacctcccccctcctttggcCCTACTGCT
TTCTGGCCcgacggaaggaaaggaggggcactGGAGTCGAGGGGGCGAAA
GGGGAGAgcctggacgaggcagacAAGGACCGAGGTGTCCCTGtctccgt
ccccctccccttcctccctcagcccctccgcctcgacctcgagcctttcc
tcctcctcttcctccccgtggcCCTCTACCTCGCCCTGTACTCTTTCTTG
CCGCACAAGGAGCTGCGCTTCATCTTTCCGGCCTTGCCCATTTTGAACTT
GTGTGCAGCCATTGGGTGGGCGCGattggaggaaagggaggggggtcggA
GGGGCGCAATGGGCCAGACAGGGAGACCAGGTCTTGGAGTGGAGACAAGC
GGAACGAGGATGTCGCTAAGGAaacggaagaaggagggagtcgaGGCGGA
GACACAAGAGGCAAGAAAGGCATGTGGGGTGAAGCATCAGCCAAAGCAgc
cggaagggggagagaaggccgTGGGAGcgatccttccctcttccccttcc
tcccggcccctgtcattcctccttcgtcaCGCTTCCTTGTTGGGATGGCT
GGTGGTCACGAGCagcctgctccccctccctctcttcttggCCGCAGCCC
GCCGGAACTACCCCGGAGGGGACGGCCTGGCCCGTTTCCATGCTCAcatt
ttcgcgccaaattccTCGCACGCTGACGCGGTCTATATTAcacatggagg
gagggagggagagaggggggggaaggacagggtgGTGAAGCTGCACATAG
GGGTGCTGGCGGCTCAAACAGGGGTCTCGCGCTTTGGGGAAGTGTGGGAG
AAGGTCGGAtctgagggaggaacagggaAAGGGGTGGGTGTGCGGTACAG
TAAGGAAGAGGGACTGTCGTCGTCGGCACGGATGCGCCGCTTCGACTACC
TGCTGgccgagagagaggaggtggaggaaatgacgaggagggcggagagg
aaggagggcgggacggaggtcacggacgtgggcggggagcgcCGGCATTG
TGAGGTGGTGGAGTGGGTGCAAGGCCGACCTCGCCTtcgaaaatggcgcg
aaagcttaCACATGCTCGGCTCGTACGCCGCCAGCCTCTGGgaccgcggc
ggcggcagcatgAGCATTCACGCCCGGAAACttatgggagggaagagcgg
aGGTCTCTCGCAACCAGTATGCTGGGAAGACGTATTGGTGGAAACCGAAG
CAGTGTTGGCTCTTGTCGCGTGTCGGGTGAGggacgcgggaggggaggaa
gcagatgacgaggagaaggagttcgggggaggagaagagaagacgGGCGA
ATGAATATCCCATTGTGCAAAAAACTTTCTCTTGGCGAGCCCGGAGGACA
CTTTTAATTAAAACACATGCCTTTGCTTCGTGCGCTCGCTCTCGCAAGTT
CGCCACGCGTCAAAACAACGGGCTCAGTGCTTCGTGCGCGAGGCAATCTT
CAAAAACGCCGGGGACGGCCCCTTCCAGCACCACGCCGTCACGTTCATGA
TAAATCATCAGATGCCAAATAAACGTGCGTTTTCCAGCGAATTTTACAAA
ACACCTATGGTGGTCTCCGGACCGCTTGGGGCGCACCCATTCGCACCGTG
AAGCATCTTTAAAACACGGTTATACATAGATATAGAGtgtgaaagagaga
gaaattTATAGAGGGTCAaggatatatatatatatacacatGTATATATA
CATGCATACATACATACGTATAGGGACCGCCAGGTATTTCCCGTGTTATT
TCCTTACAGCCTGCACACTCTTGCGTAGCTTGGCCTCTTTGTCCGTTGGC
TCTGCCAAACCCAGACGCACTTCCTGATAAATAATCTCCACCTCGTTGCA
CAACGCAatcaagagaggaggaaccgagatgttttccctcccgtcgcctt
ccccgctGCGGCCGCGAAGCCCGGCGGCGTACGCCGCCAGAGCCACCAAT
TTCCCCGCATCCAATGATTCATTGAACGCCAGGGGG back to topCoding sequence (CDS) from alignment at CM002465.1:149815..153350+ >rna5111 ID=rna5111|Name=rna5111|organism=Nannochloropsis gaditana|type=CDS|length=4386bp|location=Sequence derived from alignment at CM002465.1:149815..153350+ (Nannochloropsis gaditana)
ATGGCAAGTTTTCTTGGGAATATTACCTTCTTAGACCTGCTCTTGCTGGC
CATTATTTTATCCTATATTTGGCTATGCCCCTACAACAAGGTGGAAGAAA
GCTTCAACACCCAGGCTACCCATgacatcctcttccttcctgccttcccc
ccttcctccctcgccgcgtACGATCACCGGTCCTTCCCCGGGGCCGTCCC
CCGCACGTTCTGgggacccctcctccttgccctacCCCTACACCTtgtgc
tccccctcctccctccctccctccgccccgcgaCCAAGCTACCGGTCCAA
CTGGGGGTGCGTGTCGTTctggccctcttcctctgggcagctctcctccg
cttccgacAAGCGGCTACTTTCCGCTTCGGTCCCCGGACGGGGcaatgcc
tcctcctcctcaccctttcccAGTTCCATCTCCCTTTCTATATGTCCCGG
ACGCTGCCGAACACCTTCGCCCTaggcttcgtcctccttgcgtatgcctc
cctcctgtacCGTGCCCCCACCCGCTGTCTCTTCTACCTCGCCGGGGCCA
CGGCCCTCTTCCGGTGCGACGTCATCGTCCTGGcgttgcccctccttctt
cttctcctcctccgccggcaccttAAGCTgtcccagctcctcctcctcgg
cgcccttTTCGGCGGGACAGGGATCGTCGTgagcgtcctcctcgactcGT
ACTTCTGGCGCGCAggcagggaagagaaaagctCCGCATTCCCTTTGCTT
TGGCCGGAgggcgtcgtcctcttcttcaatACCGTCGAGAACAGATCCAT
CGAATGGGGCGCAGCCCCCTGGCACTGGtacgtctcctccgccctccctc
gctccctcttaacctcccccctcctttggcCCTACTGCTTTCTGGCCcga
cggaaggaaaggaggggcactGGAGTCGAGGGGGCGAAAGGGGAGAgcct
ggacgaggcagacAAGGACCGAGGTGTCCCTGtctccgtccccctcccct
tcctccctcagcccctccgcctcgacctcgagcctttcctcctcctcttc
ctccccgtggcCCTCTACCTCGCCCTGTACTCTTTCTTGCCGCACAAGGA
GCTGCGCTTCATCTTTCCGGCCTTGCCCATTTTGAACTTGTGTGCAGCCA
TTGGGTGGGCGCGattggaggaaagggaggggggtcggAGGGGCGCAATG
GGCCAGACAGGGAGACCAGGTCTTGGAGTGGAGACAAGCGGAACGAGGAT
GTCGCTAAGGAaacggaagaaggagggagtcgaGGCGGAGACACAAGAGG
CAAGAAAGGCATGTGGGGTGAAGCATCAGCCAAAGCAgccggaaggggga
gagaaggccgTGGGAGcgatccttccctcttccccttcctcccggcccct
gtcattcctccttcgtcaCGCTTCCTTGTTGGGATGGCTGGTGGTCACGA
GCagcctgctccccctccctctcttcttggCCGCAGCCCGCCGGAACTAC
CCCGGAGGGGACGGCCTGGCCCGTTTCCATGCTCAcattttcgcgccaaa
ttccTCGCACGCTGACGCGGTCTATATTAcacatggagggagggagggag
agaggggggggaaggacagggtgGTGAAGCTGCACATAGGGGTGCTGGCG
GCTCAAACAGGGGTCTCGCGCTTTGGGGAAGTGTGGGAGAAGGTCGGAtc
tgagggaggaacagggaAAGGGGTGGGTGTGCGGTACAGTAAGGAAGAGG
GACTGTCGTCGTCGGCACGGATGCGCCGCTTCGACTACCTGCTGgccgag
agagaggaggtggaggaaatgacgaggagggcggagaggaaggagggcgg
gacggaggtcacggacgtgggcggggagcgcCGGCATTGTGAGGTGGTGG
AGTGGGTGCAAGGCCGACCTCGCCTtcgaaaatggcgcgaaagcttaCAC
ATGCTCGGCTCGTACGCCGCCAGCCTCTGGgaccgcggcggcggcagcat
gAGCATTCACGCCCGGAAACttatgggagggaagagcggaGGTCTCTCGC
AACCAGTATGCTGGGAAGACGTATTGGTGGAAACCGAAGCAGTGTTGGCT
CTTGTCGCGTGTCGGGTGAGggacgcgggaggggaggaagcagatgacga
ggagaaggagttcgggggaggagaagagaagacgGGCGAATGAATGGCAA
GTTTTCTTGGGAATATTACCTTCTTAGACCTGCTCTTGCTGGCCATTATT
TTATCCTATATTTGGCTATGCCCCTACAACAAGGTGGAAGAAAGCTTCAA
CACCCAGGCTACCCATgacatcctcttccttcctgccttccccccttcct
ccctcgccgcgtACGATCACCGGTCCTTCCCCGGGGCCGTCCCCCGCACG
TTCTGgggacccctcctccttgccctacCCCTACACCTtgtgctccccct
cctccctccctccctccgccccgcgaCCAAGCTACCGGTCCAACTGGGGG
TGCGTGTCGTTctggccctcttcctctgggcagctctcctccgcttccga
cAAGCGGCTACTTTCCGCTTCGGTCCCCGGACGGGGcaatgcctcctcct
cctcaccctttcccAGTTCCATCTCCCTTTCTATATGTCCCGGACGCTGC
CGAACACCTTCGCCCTaggcttcgtcctccttgcgtatgcctccctcctg
tacCGTGCCCCCACCCGCTGTCTCTTCTACCTCGCCGGGGCCACGGCCCT
CTTCCGGTGCGACGTCATCGTCCTGGcgttgcccctccttcttcttctcc
tcctccgccggcaccttAAGCTgtcccagctcctcctcctcggcgccctt
TTCGGCGGGACAGGGATCGTCGTgagcgtcctcctcgactcGTACTTCTG
GCGCGCAggcagggaagagaaaagctCCGCATTCCCTTTGCTTTGGCCGG
AgggcgtcgtcctcttcttcaatACCGTCGAGAACAGATCCATCGAATGG
GGCGCAGCCCCCTGGCACTGGtacgtctcctccgccctccctcgctccct
cttaacctcccccctcctttggcCCTACTGCTTTCTGGCCcgacggaagg
aaaggaggggcactGGAGTCGAGGGGGCGAAAGGGGAGAgcctggacgag
gcagacAAGGACCGAGGTGTCCCTGtctccgtccccctccccttcctccc
tcagcccctccgcctcgacctcgagcctttcctcctcctcttcctccccg
tggcCCTCTACCTCGCCCTGTACTCTTTCTTGCCGCACAAGGAGCTGCGC
TTCATCTTTCCGGCCTTGCCCATTTTGAACTTGTGTGCAGCCATTGGGTG
GGCGCGattggaggaaagggaggggggtcggAGGGGCGCAATGGGCCAGA
CAGGGAGACCAGGTCTTGGAGTGGAGACAAGCGGAACGAGGATGTCGCTA
AGGAaacggaagaaggagggagtcgaGGCGGAGACACAAGAGGCAAGAAA
GGCATGTGGGGTGAAGCATCAGCCAAAGCAgccggaagggggagagaagg
ccgTGGGAGcgatccttccctcttccccttcctcccggcccctgtcattc
ctccttcgtcaCGCTTCCTTGTTGGGATGGCTGGTGGTCACGAGCagcct
gctccccctccctctcttcttggCCGCAGCCCGCCGGAACTACCCCGGAG
GGGACGGCCTGGCCCGTTTCCATGCTCAcattttcgcgccaaattccTCG
CACGCTGACGCGGTCTATATTAcacatggagggagggagggagagagggg
ggggaaggacagggtgGTGAAGCTGCACATAGGGGTGCTGGCGGCTCAAA
CAGGGGTCTCGCGCTTTGGGGAAGTGTGGGAGAAGGTCGGAtctgaggga
ggaacagggaAAGGGGTGGGTGTGCGGTACAGTAAGGAAGAGGGACTGTC
GTCGTCGGCACGGATGCGCCGCTTCGACTACCTGCTGgccgagagagagg
aggtggaggaaatgacgaggagggcggagaggaaggagggcgggacggag
gtcacggacgtgggcggggagcgcCGGCATTGTGAGGTGGTGGAGTGGGT
GCAAGGCCGACCTCGCCTtcgaaaatggcgcgaaagcttaCACATGCTCG
GCTCGTACGCCGCCAGCCTCTGGgaccgcggcggcggcagcatgAGCATT
CACGCCCGGAAACttatgggagggaagagcggaGGTCTCTCGCAACCAGT
ATGCTGGGAAGACGTATTGGTGGAAACCGAAGCAGTGTTGGCTCTTGTCG
CGTGTCGGGTGAGggacgcgggaggggaggaagcagatgacgaggagaag
gagttcgggggaggagaagagaagacgGGCGAATGA back to top
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