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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100377g1.7557.mrna |
| Orig protein id | gnl|cribi|Naga_100377g1.7557 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:120413..121816 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5101 ID=rna5101|Name=rna5101|organism=Nannochloropsis gaditana|type=mRNA|length=1675bp
TTGGGGGATTCCCTGCGGAAATTGTCAAGTTTGGATATTTCCAGCCATAA
CTAGATAACCTTGATGTACATGTTTAATGTGACTATCAGTGCGAAATGTG
TCCCAAAAACACAATAAACGGTCTAAACTACTCTTCAACTATCAAATTGG
TTACTCCTCGAAAAGATTTCAAAGATTCTGGCAACATGTTTTGGTACCGC
GTGATGCAGCGGAACAGCTTCCTCCGGTGCTTGCGGGGAATTTAGTGGGA
ACAGGGATGTTCAACATCTGAGCGGCAAACCTTTCAAAAAAACCTCTTCA
ACTATGCTCTTCAACAAGTCCTACATGGCCTCCATGAGCCTCCTTATGTT
TGCCGCCGGGGCTGCTGCCACCGAGACGCTTACCCTTCGGGGCTTACAAG
CCGCTGCCACTCCCATGGTGGCGCGCTCGTGCAATGCGGTGAGTGTAAAA
TAAATGTTCAAAAGAGTCTTTGATTTCTCTTTTCAAAATGTGGAATGGTA
CAAGAGGAACAGTCGGTATCAGTCGGATCCTTCGTCGCACAACTTTCTCA
ATGAAAAGCATCCTCTTTCCTCGTCTATACCCTATCCCTTCCGCTCACCC
GCCGCAGACTGAGTTGGACGCCAGCCTCGACGCACTGGCAGAGGACGCCA
AATGTGGGGCGGTATGGACTACGTTTTCGGACACCATCAGCACCGCTGAG
TTCAACCTGATGCCCCTGGCGGGCCAGGTCAAGGCGTTGGAAGCCTTCTG
CGCGACCCCCTGTGGGCCCAGCTTCGACAAGGCCGTGACCGAATGGCGCA
ATTGGTGCGACAGCAAAAAGGCGACCTTCACTCCCATGGACGACGTTGAC
GAGGATGAGGACGAGGACGAGGACATGCCGGTCACCTTTGATGGCTTTGT
AGCCGAGTTTGGGTGCTCCAAATCCGCTGGCGGTCAATTCTGTGCCCAGT
TGGTCATGGCGGAGATCGCGGCCAAGCCCGACGACTTGGAGACGAAATGC
GATTACTACAGCAGCTGCTGTTTTGGCGAGTTGAACCGCATCGTCAAGGT
CACGGACCTCGAGAGCCGAGCCTCTGCATTGGATGCCAAATGCCCGGGAG
CACGCGCCGCGCTCGAGAGCAAGTGCGCGACGGCCTAAGCAAACAGTGGC
AACAGGGTGCGATAAGGGAAATGTTGACACCATCAAGATGTCAACCAGAC
AATATCCCTCGCACGCGGCCTCTTACTATGCTGCTCTATGGGTTTACAGA
ACTGATTTATATATTTTCTATTTATATCTATATTGCAAGCTACGAAGACG
TGATGTTTTCGTGGGCTCTCGCGTCCATTTTTCCCCATTAAGTCAGCCTT
ATATGTAGAAAGTAAGACAAGGAGACATCCTGGGGAGGAGCGGTGTGCGA
TAAAATTCTTGTGTGAAACAATTGAAGCGCCTGCACGAGGAGGAAAGAAA
GTTGTTTATTATTTATACGTAGCCATATTTGGGATTGAATGTGGAGTTGT
GAAGGAAATAACCCAAAATTATTGTTCTTAGCTCACTGTAAGCATTGTTT
TCTTTTCACCTATCATGTTGTACGGATGCCAACATAAATGGCTTGGCAGG
AGGGATGGTCACAGAGGCCTGGGTGAGTACATTACATGTTAGGATCAAAT
ACGGGAAGGGAATGAAGATATCTGG back to topprotein sequence of rna5101 >rna5101-protein ID=rna5101-protein|Name=rna5101|organism=Nannochloropsis gaditana|type=polypeptide|length=190bp
MKFYMVMASLAPSMSFAFWGPALPFAPHSKQQQQQQCGQHLSATTSTRAL
IPEPLWMAKGKGGGNDKKKAPQEMQIRHWDEDDETEFLLIADSKNQATIN
CTAETLVTRGGKEYMIGLPIDTPVVVVDEKMNALELGFDARLPEMLPTVE
ATLTDMGATLLRSAGTLTIEGDVEIYDEEGEFGGEGRRGG back to topmRNA from alignment at CM002465.1:120413..121816+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5101 ID=rna5101|Name=rna5101|organism=Nannochloropsis gaditana|type=mRNA|length=1404bp|location=Sequence derived from alignment at CM002465.1:120413..121816+ (Nannochloropsis gaditana)
AAGCAGGTCATGAAATTCTACATGGTCATGGCCTCTTTggccccctccat
gtcctttGCATTTTGGGGTCCGGCCTTGCCTTTTGCACCTCACtcgaagc
agcagcagcagcagcaatgcgGGCAGCACTTGTCGGCAACAACAAGTAAG
CTTTTACATGTGGTGGGGATTTCTAGCACGTAGATCGCTCTTGTATCACG
CACTCATGTTCCAACTACATTGATATTTAATCATGGTTCACCCGGGGCGT
AGGCACTCGGGCACTGATCCCCGAGCCCCTTTGGATggcgaagggaaaag
gggggggtaacgacaagaaaaaggcgcCCCAAGAGGTAAGCGGTCAGATG
GAAATAGGTGTACGCCAGTGTTCATAATTCAAACCGTCTTGTCCGCTGCT
CAATGGTTGCGTCTAGTGGAATAAagtctctctccccttgtttgctcccc
caccctcgcATCTTGCCTCAATTGTAGATGCAGATCCGGCACTGggacga
agacgacgagACTGAATTCTTGCTGATTGCAGACAGCAAGAACCAGGCGA
CAATAAATTGCACGGCAGAGACGGTAAGTAACAAAAAAGGACTTGAAGGA
GAGGTCATGAAGATGaggagcgggggaaagaaaggcgggaTATTGAGATG
GGCCTTGAGACATACTTTCCCCATTTTCTCCAATTAACTTCGTGTTGGTG
CGACTGTCTAGGAATCACTTGCAAAGTCGTCGCCTAGGGTTGCCTccaac
ttcctccctccccatcctcctcgcccctcttctccctccgttcttccctc
ccttcctccccccccccagctcGTGACACGCGGCGGTAAGGAATACATGA
TCGGCCTACCCATTGATACACCTGTAGTTGTTGTGGACGAGAAGATGAAC
GCCCTGGAGTTAGGCTTCGACGCCCGCCTGCCCGAGATGCTGCCAACCGT
aagcccttccctccctccctccctccctccctccctccctcccttccttc
ctttttccctccctcccttccaattCCCCTCTTCACCTCTATTTCCGCCG
TTTTATGTAAGCACCTTGGCCTATGTGTAACTTTTTTACCTTGAAGGAGG
CTCCCTTCGTCCCGTTTCTAGCGCTTTCTCAGGAATATGGCTCCGGAGAA
ATGGAGTGACCGCGACGCACACACAATAGCCAGAATGGGCATGAACGAGG
GACAGGCCCGCATTTATTCCTTTCATCCCTTACTCGCTCAATCCTCGCCT
ATCTCgacctccttttttccccttgcaGGTGGAAGCTACCTTAACTGACA
TGGGCGCGACCCTCTTGCGGTCGGCGGGAACACTGACCATCGAGGGCGAC
GTGGAGATTTacgacgaagaaggggaatttgggggggaagggaggagagg
aggg back to topCoding sequence (CDS) from alignment at CM002465.1:120413..121816+ >rna5101 ID=rna5101|Name=rna5101|organism=Nannochloropsis gaditana|type=CDS|length=2850bp|location=Sequence derived from alignment at CM002465.1:120413..121816+ (Nannochloropsis gaditana)
ATGAAATTCTACATGGTCATGGCCTCTTTggccccctccatgtcctttGC
ATTTTGGGGTCCGGCCTTGCCTTTTGCACCTCACtcgaagcagcagcagc
agcagcaatgcgGGCAGCACTTGTCGGCAACAACAAGCACTCGGGCACTG
ATCCCCGAGCCCCTTTGGATggcgaagggaaaaggggggggtaacgacaa
gaaaaaggcgcCCCAAGAGATGCAGATCCGGCACTGggacgaagacgacg
agACTGAATTCTTGCTGATTGCAGACAGCAAGAACCAGGCGACAATAAAT
TGCACGGCAGAGACGctcGTGACACGCGGCGGTAAGGAATACATGATCGG
CCTACCCATTGATACACCTGTAGTTGTTGTGGACGAGAAGATGAACGCCC
TGGAGTTAGGCTTCGACGCCCGCCTGCCCGAGATGCTGCCAACCGTGGAA
GCTACCTTAACTGACATGGGCGCGACCCTCTTGCGGTCGGCGGGAACACT
GACCATCGAGGGCGACGTGGAGATTTacgacgaagaaggggaatttgggg
gggaagggaggagaggagggATGAAATTCTACATGGTCATGGCCTCTTTg
gccccctccatgtcctttGCATTTTGGGGTCCGGCCTTGCCTTTTGCACC
TCACtcgaagcagcagcagcagcagcaatgcgGGCAGCACTTGTCGGCAA
CAACAAGCACTCGGGCACTGATCCCCGAGCCCCTTTGGATggcgaaggga
aaaggggggggtaacgacaagaaaaaggcgcCCCAAGAGATGCAGATCCG
GCACTGggacgaagacgacgagACTGAATTCTTGCTGATTGCAGACAGCA
AGAACCAGGCGACAATAAATTGCACGGCAGAGACGctcGTGACACGCGGC
GGTAAGGAATACATGATCGGCCTACCCATTGATACACCTGTAGTTGTTGT
GGACGAGAAGATGAACGCCCTGGAGTTAGGCTTCGACGCCCGCCTGCCCG
AGATGCTGCCAACCGTGGAAGCTACCTTAACTGACATGGGCGCGACCCTC
TTGCGGTCGGCGGGAACACTGACCATCGAGGGCGACGTGGAGATTTacga
cgaagaaggggaatttgggggggaagggaggagaggagggATGAAATTCT
ACATGGTCATGGCCTCTTTggccccctccatgtcctttGCATTTTGGGGT
CCGGCCTTGCCTTTTGCACCTCACtcgaagcagcagcagcagcagcaatg
cgGGCAGCACTTGTCGGCAACAACAAGCACTCGGGCACTGATCCCCGAGC
CCCTTTGGATggcgaagggaaaaggggggggtaacgacaagaaaaaggcg
cCCCAAGAGATGCAGATCCGGCACTGggacgaagacgacgagACTGAATT
CTTGCTGATTGCAGACAGCAAGAACCAGGCGACAATAAATTGCACGGCAG
AGACGctcGTGACACGCGGCGGTAAGGAATACATGATCGGCCTACCCATT
GATACACCTGTAGTTGTTGTGGACGAGAAGATGAACGCCCTGGAGTTAGG
CTTCGACGCCCGCCTGCCCGAGATGCTGCCAACCGTGGAAGCTACCTTAA
CTGACATGGGCGCGACCCTCTTGCGGTCGGCGGGAACACTGACCATCGAG
GGCGACGTGGAGATTTacgacgaagaaggggaatttgggggggaagggag
gagaggagggATGAAATTCTACATGGTCATGGCCTCTTTggccccctcca
tgtcctttGCATTTTGGGGTCCGGCCTTGCCTTTTGCACCTCACtcgaag
cagcagcagcagcagcaatgcgGGCAGCACTTGTCGGCAACAACAAGCAC
TCGGGCACTGATCCCCGAGCCCCTTTGGATggcgaagggaaaaggggggg
gtaacgacaagaaaaaggcgcCCCAAGAGATGCAGATCCGGCACTGggac
gaagacgacgagACTGAATTCTTGCTGATTGCAGACAGCAAGAACCAGGC
GACAATAAATTGCACGGCAGAGACGctcGTGACACGCGGCGGTAAGGAAT
ACATGATCGGCCTACCCATTGATACACCTGTAGTTGTTGTGGACGAGAAG
ATGAACGCCCTGGAGTTAGGCTTCGACGCCCGCCTGCCCGAGATGCTGCC
AACCGTGGAAGCTACCTTAACTGACATGGGCGCGACCCTCTTGCGGTCGG
CGGGAACACTGACCATCGAGGGCGACGTGGAGATTTacgacgaagaaggg
gaatttgggggggaagggaggagaggagggATGAAATTCTACATGGTCAT
GGCCTCTTTggccccctccatgtcctttGCATTTTGGGGTCCGGCCTTGC
CTTTTGCACCTCACtcgaagcagcagcagcagcagcaatgcgGGCAGCAC
TTGTCGGCAACAACAAGCACTCGGGCACTGATCCCCGAGCCCCTTTGGAT
ggcgaagggaaaaggggggggtaacgacaagaaaaaggcgcCCCAAGAGA
TGCAGATCCGGCACTGggacgaagacgacgagACTGAATTCTTGCTGATT
GCAGACAGCAAGAACCAGGCGACAATAAATTGCACGGCAGAGACGctcGT
GACACGCGGCGGTAAGGAATACATGATCGGCCTACCCATTGATACACCTG
TAGTTGTTGTGGACGAGAAGATGAACGCCCTGGAGTTAGGCTTCGACGCC
CGCCTGCCCGAGATGCTGCCAACCGTGGAAGCTACCTTAACTGACATGGG
CGCGACCCTCTTGCGGTCGGCGGGAACACTGACCATCGAGGGCGACGTGG
AGATTTacgacgaagaaggggaatttgggggggaagggaggagaggaggg back to top
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