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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101172g1.88.mrna |
| Orig protein id | gnl|cribi|Naga_101172g1.88 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:34436..35114 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5070 ID=rna5070|Name=rna5070|organism=Nannochloropsis gaditana|type=mRNA|length=2632bp
CCAGGGTCCCCTTCCTGTCTACACGCCGACCGCCATATCCGAGTACCGCA
TGGTGAAGACGCGAGACTCCTTCTTCCCTCCCTTCGTTTTGGGCACTCTG
GAACGCCTCGATCAGGCTCGCGTCGCCGTCACCAGTCTCTTCGCGCCTCA
GCCGGCCAATGCCGCAGGCACCCCCACCTCCCCGGGCACCTCCCCCTCCT
CCTCGGACGAGCCGCAAGAGGAGTTGGAACGCATGGTCTTCGCACGGCGG
GCCGCGGCGCGCCGGAGAGAAGAGGAGAAGAGGAAGGAAGAGGAGGCGGA
AGCCCTCGAGGAGGACGGGGGCGACAACGTCTTTTCCGATCCTGCCTCCG
GAAAAGGAGCGGAGGGCATGGAAGGCCGCGACGGGGAAGGCAAAGCGCCG
GTGCTTGCGGTCTCGGCCTCCCCTTCAACCTCCACGCGAGACGTTCCGAG
ATTGTCTCCCCGAGAAATGGCTTTCGATGGGCGGGAGCAGGACTGGTATC
TGGCGCGCGCCTCGGAGAAAATGGCGCCGATATCACCCACCTCGCCCCCC
ATTCCTTCCTACTGGGAAGACAAGGCCGGCGAGGAGGGAGAAAAGGGAAC
CTCCCTCGCCAGTGCGGCCCACCTTGCCTCTCTCGAACGCGGCATGGCGT
CTTCTTTCCTTACTCTTCTGGCACACGCCCAGACGCGCAAACACTTCAAG
CTCCTGCTTCAAGATGCGGGGGGACTCGGCTTTCTCGTGAGAGGCTTGAC
GATTACCAGCCCTCCCAACCCGGATCGAGCGCAGGCCCTTGAAACGCTCT
GTCGACTCCTGCGCCCACGCACCAAAGCCCCTCCCGGCGCCTCCACCTCA
CCCTCGTTCGGTGCTTCCTCGTTCTCAGGGAAAGGGGGAGACGTCGAGGA
GGGAAATGACAGAGGCCGGACTCCCTACGACAGCGACGGCGAAGGGGAGT
GGGGAGAATCCGAGGACGAGCCCAACGAGGAGAGCTCTCCGGGTGGGGTC
GTGATGGCAGCTCTGACGGAGGACAAGGACATGGAGCTCGCTCTCATCCG
CGTCCTCCTCTCCCTCGTAGAAGAGCCTCTTGGCATCAGCGTTTCGCGTC
TCACCGGCCTTGGCCGTAGCCATTCCTCGATCGAGGAGCTTCGGTGCCAA
CGGGCGGCCATTTACTTGCTCTACACGATGTGTCTAGCTTCAGAGAGGGC
AATAGAGGCGTTGCAGACGGAAGGGCGCCTCATCCCTGCCCTCCAGCAGA
TCCTTCGGGAGCGTCTGTTCGAGGAAGGGCCCATGAGTGTATATCACACT
ATCCACAAACTCTTGAGCATCGTTGGGTACCACGAATGGAAACCCCGTCA
AGCGGGTCAGAAGGGCCTCCGAATCCTTTCCCTAGATGGTGGGGGAACGC
GGGGTGTGATGACCATCGCCCTCCTTTCTCATTTGATTGAGGCAACGGGG
AAGGAGGTGCATGAGCTTTTCGACATTATCTGCGGAAATTCTACGGGCGG
CATTCTCGCCGCACTTTTTGCTGTTAAAGCCACCAAAGTGAAGGAGGCGG
GTCGCCTTTACGACGAATTGATCAAAAAAATATTCAACAAAAGCCCCGCT
CCTCTCGCCTACAGCAACTTGGTCCTACGCACCGCCCAGTACAACGAGAA
CGTATGGGAGGATGTCCTGAAAGTCCTGATAGGGGAGACTCTCCTTATCG
ACACGATGGGCGGGCCGCAGGGTCTGAATACCCCCAAATTCTTCGTCCTC
TCCTCTGTGCTCTCTTGCAACCCCGCGAAACTTTTCATGTGGCGCAACTA
CAACTACCGACGCGCTCAACGGAGTCGCTACGAGGGCGATTTCAGAGCCA
AGGTCCGAGAAGCCATCCGAGCCACAACGGCGGCCCCTACCTACTTCTAC
CCCCTTGTGCGCGGCGGGATGGTCCACTCTGACGGCGCGCTCCTGGCCAA
CAACCCCACAGCCATCGCCATCCACGAGGCCAAGATAATCTATCCCAACG
TTCCGATCGAGGCCGTGGTCTCGGTCGGTACCGGCAACGTCTTGGAGCCC
CAGCCCGTCGAAGGCTTCGGTTGGGCGCCCATTTTCAATCAAATCATTAA
CAGCGCCACCAACACGGAGGCTGTGCACGACTCATTGGCCGACTTCCTTC
CCCAAGACCGGTACTACCGTTTCAACCCCAACATCGAGAACGTCTCCATC
GACGAGATCCGGCCTGAGAAGCTGGCTTATTTGAAAGCGACTGCCAAGGA
GTACTTCCAGGATCCGAGGAACAAGGAGCGCCTCGATCAGCTCATCAAGC
TTTTACAGCCCAAGAAAAGTACCCGTTCTCCCCTTGCCTCTACCTCTTCC
GGCCCCTCCTCTTCTCCTTCCTCCTCCCCTACTGCCGCTTCTTCAAGAGC
TCAGTCCACCCCCACCGAAGGCAGAAAATCCAGCACTGCGACCACGAGTA
GAGCGATGTCGTCGAAGAAGGCTTCGAGTCTCTCAGCTTCCCCCAAATCT
CCTCCGAATGGCACCCCTTCTTCCTCTTCCTCTACATATCTGCCCTCCTC
GACGTCCTCCTCAACACCGTCATCCTTTGGGAAGACTACGCGAAGCAGCC
AATCTTCAAATCCACGCACAGCGGCCGTTTAA back to topprotein sequence of rna5070 >rna5070-protein ID=rna5070-protein|Name=rna5070|organism=Nannochloropsis gaditana|type=polypeptide|length=171bp
MKRSSKTRPGGREERHAQAHVIGPLRPLFSLLLLAATSTQAFQYPSQWQR
RPLHQPHPRQQTAPVAPLRGLGASSTLSRRSRSSFPPFSPSPSPLPLAAS
STSFEPLRPAYDTNSTSSSSSAVSAPAETVDKKGSKAMPTAFPPQMLGEE
ELLVRGPPPPAVGPMTKVSST back to topmRNA from alignment at CM002465.1:34436..35114- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5070 ID=rna5070|Name=rna5070|organism=Nannochloropsis gaditana|type=mRNA|length=679bp|location=Sequence derived from alignment at CM002465.1:34436..35114- (Nannochloropsis gaditana)
CTCAGGCTTGCTGAATCCAAGAAGCGAGGCTTTGCGACCATTTAATCGAC
TGCAGCACCTCCCCACCTGCCTACCCCGAGATCGGTTCCGCATGTGGTGT
GCAAGGAACTAGTAGGAACATAACAGAGAGCTCACACAAGCAGCAGTGGA
ATTCCTGGGGAGAATGAAGCGGTCCTCAAAGACTAGGCCGGGTGGCCGTG
AGGAACGGCACGCGCAAGCACACGTAATTGGTCCCCTACGGCCCCTCTTC
TCCCTTCTCCTCCTTGCAGCAACATCGACTCAGGCGTTCCAGTATCCCTC
ACAATGGCAGCGTCGTCCTCTCCACCAGCCACATCCCAGGCAGCAAACAG
CGCCTGTCGCACCTCTGCGTGGTCTGGGAGCGTCTTCTACGCTATCTAGG
AGGAGTCGTTCCTCCTTCCCTCCTTTCTCCCCCTCCCCCTCCCCTCTCCC
CTTGGCCGCATCCTCCACCTCCTTCGAGCCCCTTCGTCCAGCTTATGACA
CCAACAGTACCTCGTCATCGTCATCTGCGGTATCTGCGCCTGCGGAAACC
GTCGACAAGAAGGGCAGCAAGGCAATGCCGACGGCCTTCCCCCCCCAAAT
GCTGGGCGAGGAGGAGCTTCTGGTGCGAGGGCCTCCTCCGCCCGCCGTGG
GGCCCATGACTAAGGTATCTTCAACTTAA back to topCoding sequence (CDS) from alignment at CM002465.1:34436..35114- >rna5070 ID=rna5070|Name=rna5070|organism=Nannochloropsis gaditana|type=CDS|length=516bp|location=Sequence derived from alignment at CM002465.1:34436..35114- (Nannochloropsis gaditana)
ATGAAGCGGTCCTCAAAGACTAGGCCGGGTGGCCGTGAGGAACGGCACGC
GCAAGCACACGTAATTGGTCCCCTACGGCCCCTCTTCTCCCTTCTCCTCC
TTGCAGCAACATCGACTCAGGCGTTCCAGTATCCCTCACAATGGCAGCGT
CGTCCTCTCCACCAGCCACATCCCAGGCAGCAAACAGCGCCTGTCGCACC
TCTGCGTGGTCTGGGAGCGTCTTCTACGCTATCTAGGAGGAGTCGTTCCT
CCTTCCCTCCTTTCTCCCCCTCCCCCTCCCCTCTCCCCTTGGCCGCATCC
TCCACCTCCTTCGAGCCCCTTCGTCCAGCTTATGACACCAACAGTACCTC
GTCATCGTCATCTGCGGTATCTGCGCCTGCGGAAACCGTCGACAAGAAGG
GCAGCAAGGCAATGCCGACGGCCTTCCCCCCCCAAATGCTGGGCGAGGAG
GAGCTTCTGGTGCGAGGGCCTCCTCCGCCCGCCGTGGGGCCCATGACTAA
GGTATCTTCAACTTAA back to top
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